Oncorhynchus kisutch (coho salmon): 109896167
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Entry
109896167 CDS
T09179
Name
(RefSeq) ATP-binding cassette sub-family A member 2-like isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki02010
ABC transporters
oki04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109896167
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109896167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109896167
Transporters [BR:
oki02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109896167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
ABC2_membrane_2
Motif
Other DBs
NCBI-GeneID:
109896167
NCBI-ProteinID:
XP_031685570
Ensembl:
ENSOKIG00005030990
LinkDB
All DBs
Position
LG8:14195488..14326794
Genome browser
AA seq
2547 aa
AA seq
DB search
MGFLHQLHLLLWKNVSLKRRGPWVLAFEIFIPLVLFFILLGLRQKKPAIPVKEVSFYSAA
PLTSAGIIPIMQSLCPDGQRDEFGFLQYKNSTVTQLLERISDVVLQNHLLTAERPGLGQE
LESLQQHLERLSTPTGPSPLDNGFNTSQGFTVASMLKNQSVFRQFLVRNLSLPNNTASLL
LSTPVNLKEVFNMIFGLYPRAGGGSSHASGGAKETAQTPAEKSLQLEEKLLGAMHRLDGG
LIHKALRDPTKAAHRQGLLKLMSQALGLAEGEAGQRYDPQGLKEMEGVLLTGAMLEMLTC
GEDGTGELSKILLVPEKQQSLLQAYRSTVCGGGEGQRTERFGEMSQELRDQIDTQSLVDK
LRLEKVNFSAPLSQSHLGALLKDLADVERLFRDVDLLSGLARLLPKGACAGGHTAPGAPA
NTTTSWARNATTWGPNTTETPGEEGGEEESGGREKEKGKENPHSQFSAFVQLWAGLQPIL
CGNDRIIEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYSPVGSQVDKVIQKAN
ETFAFVGNVTHYARVWLNISAQLRTYLEEGKLHHQLAWLQLLTSNLRGHPELLNGTDSDL
LRGLLDGNYTLSNTSTLLEQLDTIDNAACGWTHFMSKVSVDIFKGFPDEDSIVNYTLNQA
YHDNISVFASVIFQTNRDGSLPPHVLYKIRQNSSFTEKTNEIRRAYWRPGPNTGGKFYFL
YGFVWIQDMIERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWV
YSVAMMIQHIVAEKEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGRV
LLHSDILIIWLFLSIYAIATIMFCFLVSVIYSKAKLASACGGIIYFLSYVPYMYVAIREE
VAHDKITAFEKCIASLMSTTAFGLGSKYFALYEVSGVGIQWRTINQSPVEGDDFNLGLSM
MMLIIDASVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRVETWEWPWGGAARLS
VMEEDQACAMEHRRSEEMRGMEEEPSHLPLVVCIDKLTKVYKTGNKLALNKLSLNLHENQ
VVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTDMERIRQNLGMCPQHNVLFDK
LSVEEHLWFYSKLKGMAEEDIRKEMDKMIEDLELNNKRHSLVQTLSGGMKRKLSVAIAFV
GGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRIAIISHGK
LKCCGSPLFLKSTYGDGYKLTLVKKQSESGDQVTQPPFFLSPCSSSSLSPSSSLSPSSLS
PCSEARVTKFIRQFVGSCLLVSDSNTELSYVLPSEAVKKGCFERLFQELEQSLDLLALTS
FGVMDTTLEEVFLKVSEEDQSLENSDADMKDSPGGSSVGKPAAAVVGLGAPGPQGDGPGP
GGPAGGSSSVLRPGVELSNLLNCSRLSQSQSSLRSSSSLGSVRGDEGGLYTDFYGDYCPL
FDNGQDPDSTSLTAEADETPGPEQPVVLEDQGSFKLDGWWLKLRQFHGLIVKRFHCAKRN
TKGLFSQILLPAFFVCVAMTVALSVPSIGDLPPLVLSPSQYHNYTQPRGNFIPYANEDRP
QYSSKLSPDASPQKIANTLRLPSGVGATCVLKTPFNSTLDQLAQTLNPSANNSKTLAARY
FDSMCLDSFTQGVPLSNFVPPPPSPAPSDDPDPRFEDRLWNFTAATLTTVRETVTSPPTL
PLSIREPVRCICSMQGTGFSCPSGVGGRPPLMKVVTGDILVDITGRNVSEYLLYTSDRLR
LHRYGGLTVGNIQKSVPASFGKNNPPMVRKIAVRRSAQVLYNNKGYHSMPTYLNVLNNAI
LRANLPPGKGNPAAYGITLTNHPMNRTSARLSLDYLLQGTDVVIAIFIIVAMSFVPASFV
VFLVAEKSTKAKHLQFVSGCDPVIYWLANYVWDMLNYLVPATCCVLILFVFDLPAYTSPT
NFPAVLSLFLLYGWSITPVMYPASFWFEVPSTAYVFLIVINLFIGITATVATFLLQLFEH
DKDLKLVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQFDKIKSPFEWDIVTR
GLVAMTIEGFVGFFITILCQYNFLRKPSRVPVSSQPIEDDDEDVASERRRVLRGEADNDM
LKIDNLTKVYKSRKMGRILAVDRLCLGVRPGECFGLLGVNGAGKTTTFKMLTGDESTTGG
EAFIGGSSILKELLRVQQSIGYCPQFDALFEDLTAREHLELYTRLRGIPWKDEERVVSWA
LEKLELSKYADMPAGTYSGGNKRKLSTAIALIGYPSLVFLDEPTTGMDPKARRFLWNLIL
DILKTGRSVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTKTS
SSVKEVVRFFNRNFPEAVLKESHHTKVQFQLKSERISLAQVFSKMEQVVEVLGIDDYSVS
QTTLDNVFVNFAKKQSDNLEQQESSPPGGGQSPLQRLLTLLRPRLANTELDALVSEEPEE
LESDDDEGLISFEEERVQLSFNTDTLC
NT seq
7644 nt
NT seq
+upstream
nt +downstream
nt
atgggattcctccaccagctacatcttctgttgtggaagaatgtgtctttgaagagaaga
ggaccgtgggtgttggcctttgagatcttcatccccctggtccttttcttcatcctgctg
ggcctgcgccagaagaaacctgccatccctgtcaaggaagtctccttctacagcgcagca
cccctcacctcagcaggcatcatccccatcatgcagtctctgtgtcccgacggccagagg
gacgagtttggcttcctgcagtacaagaactccactgtgacccagttgttggagcggatc
agtgatgtggtgttacagaaccacctgctcacagcagagaggccaggactgggccaggag
ctggagtccctgcaacaacacctggagagactcagcacgcccacagggccctccccgctg
gacaacggcttcaacaccagccaagggttcaccgtggccagtatgttgaagaaccagtct
gtgttccgtcagtttctggtcaggaatctgtctctccccaataacacggccagccttctg
ctctccactcctgtcaacctcaaagaggtcttcaacatgatatttggcctgtaccccaga
gctggaggggggagtagtcatgcttcaggaggggcaaaagagaccgcacaaacccctgca
gagaagagccttcaactggaagagaagcttctgggagccatgcatcgtctggacggagga
ctgatccacaaagctttacgagacccaaccaaagcagcccatcggcagggcctactcaaa
ctcatgtctcaggcattaggcctagcagaaggagaggcaggccagagatacgatccccag
ggactgaaggagatggagggtgttctcctgactggtgccatgttggaaatgcttacttgt
ggggaggatgggactggtgagctgagcaagatcctattggttcctgagaagcagcagtcc
ctgctccaggcctatcgcagcacagtgtgtggtggaggggagggacagaggactgagcgc
tttggagagatgagccaggagctgagagaccagatagacacacagagcctcgttgacaag
ctgcgtctggagaaggtcaacttctcggctcctctgtcccagtcccacctgggtgctctg
ctgaaagacctggctgacgtggagaggctcttcagggacgtagacctgctgtcaggcctg
gctcgcctgctccctaagggggcctgtgctgggggtcatacggcccctggggcccccgcc
aacaccaccacctcctgggcccgcaacgccactacctgggggcccaacaccactgagacg
cctggggaggagggaggagaggaggagagtggaggacgagagaaagagaaagggaaagag
aatcctcattcacagttttctgcttttgtacagctgtgggcagggctgcagcctattctg
tgtgggaacgataggatcattgagcctgaagctttgaagcaggggaatatgagctctctg
ggtttcaccagtaaagagcagcgcaatctgggtttactcgtgcatctgatgactacaaat
cccaagatcctctactctcccgttggctcacaggtggacaaagtcattcagaaggcaaat
gagacatttgcgtttgtggggaacgtgactcactacgccagggtgtggctcaacatctct
gcccagctcaggacctacctggaggagggcaagctgcaccaccagctggcctggctgcag
ctgttgacctctaacctgcgtggtcacccggagctgctgaacgggacggacagtgacctg
ttgcgtgggctgctggatggcaactacaccctgtccaacacctccaccctgctggagcag
ctggacaccatcgacaacgcagcctgcggctggacacacttcatgtccaaggtcagtgtg
gatatcttcaagggtttccctgatgaagacagcatcgtcaactataccctgaaccaagcc
taccacgataacatctcagtgtttgccagtgtgatattccagaccaacagagatggctcc
ctgcctcctcatgtcctctataagatcagacagaactccagcttcacagagaaaaccaac
gagatccgccgggcctactggcgcccggggcccaacacagggggaaagttctactttctc
tatggctttgtgtggatccaggatatgatagagagagccatcattaacacgtttgtgggc
catgacgtggtggagcctgggaactatgttcagatgttcccctacccctgctacaccaga
gacgacttcctgtttgtgatcgagcacatgatgcctctgtgcatggtgatctcctgggtg
tactctgtagccatgatgatccaacacattgtggctgagaaggagcaccggctcaaagag
gtgatgaagatgatgggcctgaacaatgcggtccactgggtggcctggttcatcactggc
ttcgtccagctgtccatctcagtgaccgccctgacggccatcttgaagtatggcagagtg
ctcctccacagtgacatcctcatcatctggctcttcctctccatctacgccatcgcaacg
atcatgttctgtttcctggtgtcagtgatctactccaaggccaagctggcgtctgcctgt
ggcgggataatctacttcctaagctacgtcccttacatgtacgtggccatcagggaggag
gtggcccatgacaagatcaccgcctttgaaaagtgcattgcttctctgatgtcgaccaca
gcgttcggcctgggctctaagtactttgccctgtatgaggtgtcaggtgttggcatccag
tggcgcaccatcaaccagtcacctgtagagggcgatgactttaaccttggtctgtccatg
atgatgctcatcatcgatgccagtgtgtatggagttctcacctggtacatagaagctgtg
catccagggatgtatgggctgccccggccgtggtacttccccctgcagaagtcctattgg
ctgggcagtgggcgtgtggagacgtgggagtggccttggggaggagcagccaggctgagt
gtcatggaagaggaccaggcatgtgccatggaacaccggcgatctgaggagatgcgtggt
atggaagaggagcccagccacctgcccctggtggtgtgtatagacaagctgaccaaggtg
tacaagacgggcaataaactggccctcaacaagctgagcctcaaccttcatgagaaccag
gtggtctccttcctgggccacaacggagccggcaagacaaccaccatgtctattctgaca
ggtctgttcccgcccacctcgggctcagccaccatctacggccatgacatccgtactgac
atggagcgtatcaggcagaacctgggcatgtgtccccagcacaacgtgctctttgacaag
ctcagtgtggaggagcacctgtggttctactccaaactcaaaggcatggccgaggaggac
atccgcaaggagatggacaagatgatcgaggatctggagctgaataataaacggcacagc
ctggtccagactctgtctggaggaatgaaacggaaactgtctgtagccatagcgtttgtg
ggcggctcccgggcagtcatcctggatgagcccacggcaggtgtcgacccttacgcacgc
agagccatctgggacctcatcctcaagtacaaacagggccgcaccatcctgctgtccacc
caccacatggatgaggctgacctgttaggagaccgcatagccatcatctcccatgggaaa
ctcaagtgctgcggctccccactctttctcaagagcacctacggagatggctacaaactc
accctggtcaagaaacagagtgagagcggcgaccaggtcacccagcctccattcttcctg
tctccctgctcctcctcctccctgtctccctcctcctccctgtccccctcctccctgtct
ccctgctcggaggcccgggtcaccaagttcatccgtcagttcgtggggtcctgtctgctg
gtgtctgactccaacactgagctgtcctatgtgctgccttcggaggctgtcaagaagggc
tgcttcgagaggctctttcaggagttagagcagagtctggacctcctggctctgaccagc
ttcggggtgatggacacgactctggaggaggtcttcctcaaggtgtcagaggaggaccag
tccctggagaacagtgatgctgacatgaaggattccccgggcggtagctcagtggggaag
cctgctgctgcggtggtgggtctgggggcccctgggccgcagggtgatggcccggggccc
gggggtcctgcaggaggcagcagcagtgtgctgagaccaggggtagagctcagtaacctg
ctaaactgctccaggctcagccagagtcagtcgtccctgcgctcatcctcctccctgggg
tccgtgcggggggacgagggggggctctacacagacttctatggagactactgccccctc
ttcgacaacggacaagaccctgactctaccagcctgacggcggaagcggatgagacccct
ggccctgagcagcctgtggtcctggaggaccagggcagcttcaagctggacggttggtgg
ctgaagctacgtcaattccatggcctcatcgtgaagaggttccactgtgccaagaggaac
accaagggtcttttctctcagatcctgctgcctgcattcttcgtctgtgtggccatgacc
gtagccctgtctgtgccttccatcggagatctgccaccattggtcttatctccatcccag
taccacaactacacccagcctcgtggcaacttcatcccctacgccaacgaagaccgccca
cagtacagcagtaaactgtccccagacgccagccctcagaagatcgccaacacgctccgt
ctgccttctggcgtgggcgccacctgcgtcctcaaaacgcccttcaacagcaccctggac
cagctggcacagacgctcaaccccagtgccaacaactccaaaaccctagctgcccgctac
tttgactccatgtgtctggattccttcacccagggagtgcccctgtccaacttcgtaccc
cctcccccctcgccagccccctcagatgaccccgaccctcgttttgaggatagactgtgg
aacttcactgctgccactcttaccactgtacgggaaacagtgacctctccccccaccttg
cctctgtctatccgggagccggttcgttgtatctgttccatgcaggggacgggcttctcc
tgccccagtggggtcggggggcggccgccccttatgaaggtggtcactggggacattctg
gtggacatcaccgggcgcaacgtgtcagagtacctcctctacacctctgacagactgcgc
ctgcacagatatggaggactcactgtaggcaacatacagaaatcagtcccagcatccttt
gggaaaaataatccgcccatggttcgcaaaatagccgtgcgcagatcagctcaggtgctg
tacaataataaagggtaccacagcatgccaacctatctcaatgtcctcaacaacgccatc
ctgcgcgccaacctgcctccaggcaagggcaaccctgctgcatacggaatcaccctgacc
aaccaccctatgaaccgtaccagtgcaaggctctctttggactacctgctccagggcact
gatgtggtgatagccatctttatcatcgtggccatgtcctttgtaccagccagctttgtg
gtcttcctagtggcagaaaagtctaccaaggcgaagcacctgcagtttgtctctggatgt
gacccagtcatctactggctggccaactacgtatgggacatgctgaactacctggtgcca
gccacgtgctgtgtccttatcctgtttgtctttgaccttcctgcgtacacatccccaacc
aacttccccgcggtcctctctctcttcctcctctacgggtggtctataactcctgtcatg
taccctgcctccttctggttcgaggtgcccagcacggcctatgtgttcctcatagtcatc
aacctcttcataggaatcactgccactgtagccaccttcctgctgcagctctttgaacat
gacaaggatctgaaactggtgaacagctacctaaagtcctgtttccttatcttcccaaat
tacaaccttggtcatggcctgatggaaatggcctacaacgaatacatcaatgagtactat
gctaaaataggtcagtttgacaagatcaagtctccatttgagtgggatattgtgactcga
ggtctggttgccatgacaatcgagggctttgtaggcttcttcataaccatcctgtgccag
tacaacttcctcaggaaaccctcgagagtaccagtcagcagccagcccatagaggacgat
gatgaggatgtggcctctgagagaaggagagtactgagaggagaagctgacaatgacatg
ctgaagattgacaacctcaccaaggtgtacaaatcgaggaagatggggcgtatcttggct
gtggaccggctatgtttgggcgtgcgtcctggggagtgtttcggcctcctgggtgtgaac
ggagcagggaagaccaccaccttcaagatgctgactggagacgagagcaccacgggagga
gaggccttcataggggggagcagtatcctgaaggagctgttgagggtgcagcagagcatt
ggctactgtcctcagtttgacgcgctgtttgaagacctgacagccagagagcacctggag
ttgtacacacgcctccggggcatcccttggaaggacgaggaaagggtggtctcatgggcc
ctggagaaactggagctgtccaagtatgcagacatgcccgctggcacctacagtggggga
aacaagcgcaagctgtccactgccatcgccctcatcggatacccctctctcgtattcctg
gatgaacccactacagggatggatcctaaggcccgcagattcctctggaacctcatcctc
gacatcctcaagacgggacgctctgtggtgctgacatcacacagtatggaggagtgtgag
gctctgtgtaccagactgggcatcatggtcaacggcaggttcaaatgcctgggtagcatc
cagcacctcaagaacaggtttggtgatggttatatgatcacagtccggaccaagaccagt
tccagtgtgaaggaggtggtgagattcttcaacaggaatttccctgaggctgtactaaag
gagagccaccacactaaggtccagttccagctgaagtcagagaggatctccctggcccag
gtgttcagtaagatggagcaggtggtggaggtgctgggaatagacgactactctgtcagc
cagaccacactggacaatgtatttgtgaactttgcaaagaagcagagcgacaacctggaa
cagcaggagagttcaccacctggtggaggccagtcgccactgcagcgcctgctaaccctg
ctcagaccccggctggccaacacggagctcgacgccctggtcagcgaagaaccggaggaa
ctagagagtgatgacgatgagggcctcatcagcttcgaggaggagagggtgcagctctcc
tttaacacagatacactctgttga
DBGET
integrated database retrieval system
