Oncorhynchus kisutch (coho salmon): 109896275
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Entry
109896275 CDS
T09179
Name
(RefSeq) liprin-alpha-2-like isoform X1
KO
K26226
liprin-alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109896275
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109896275
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
109896275
NCBI-ProteinID:
XP_031687453
Ensembl:
ENSOKIG00005007307
LinkDB
All DBs
Position
LG9:4570346..4795008
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AA seq
1245 aa
AA seq
DB search
MMCEVMPTISEDTALSQRGSQSSASDPDSHFEQLMVNMLDERDRLLDTLRETQESLGMSQ
QHLEDVIYDRDSLQRQLSSALPQEFAALTKELNVCRENLLEKEEEISELKAERNNTRLLL
EHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVS
LERVSALEEELTSANQEIVALREQNAHIQRKVASGDGSEDMLEGTDASQKVHSKRLSNGS
MESAHEASQVVELQDLLEKQNYELAQMKERMSSLSSRVSEVEQELDTARKDLIKTEEMST
KYQRDIKEVRREAMCQKEDMEERIVTLEKRYLSAQRESTSLHDISDKLENELANKEAFLR
QMEDKNRQLLERLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEERMRH
LEGQLEEKHQELLRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNV
LIQDSEGYRKQYEDSIHEKTHLADEIDKLRSELDQFRLRTGSLTEPTLSRYGSHLDTSGE
LRFSLGSLAETQSDHYRSAKVIRRPRRGRMGLHRDESKAKSLGEHEWRSQQLGILGSHPF
ESEMSDMSDIDDDDRETMFSSMDLLSPGGHSDAQTLAMMLQEQLDAINKEIRLIQEEKES
TELRAEEIENRVASVSLEGLNLARMHHPGASITASATASSLASSSPPSGHSTPKLDHRST
TDMERMGIMTLPSDLRKHRRKIAATDDDGQDKATIKCETSPPPTPRTVRMTRTLPASSHN
EARGIAANLEAEASALSSVASSQDSINKQPKKKGIKSSIGRLFGKKEKTRLAQLHAHREA
IGQSQGVSDPDLGQDMAVGKLGTQAEKDRRLKKKHELLEEARRKGLPFAQWDGPTVVAWL
ELWLGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSP
SAPPTSRTPSGNVWVTHEEMETLAAPSSKTRSGESEEGSWAQTLAYGDMNHEWIGNEWLP
SLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMGLKKLNYDRKE
LERRREHSQHEMRDVLVWSNERVIRWVQSIGLKDYANILLESGVHGALVALDDNFDHTSL
ALLIQIPNQSTQARQILEREYNNLLALGTERRLDEYEDNDLRGPSWRRQFPPRDVHGISM
MPGSAETLPAGFRVTTGSHSRRLPPEVGPLAVQHLDSSTVRTYSC
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgaggacacggcgctgagccagcggggctcc
cagagcagtgcctcggacccagactcccactttgagcagctgatggtcaacatgctggat
gagagagaccgcctgttggacacgctgagggagacccaggagagcctggggatgtcccag
cagcacctggaggacgttatctacgaccgggactcactgcagcgccagctcagctccgcc
ctgccacaggagtttgcagccctgaccaaggagctgaacgtgtgcagagagaaccttttg
gagaaggaggaggagatctctgagctcaaggccgagaggaacaataccaggttgcttctg
gagcatctggagtgcctggtgtccaggcatgagcggtcactacgtatgactgtggtcaag
cggcaggcccagtccccctcaggcgtgtccagtgaggtggaggtcctcaaagcgctcaag
tccctgttcgagcaccacaaagctctagacgagaaggtgagggagagactgcgggtgtcg
ctagagagggtctctgcattggaggaggagctaacatcagccaaccaggagattgtggcc
ttacgggagcagaatgcccacatccagaggaaggtggcgtcaggggacgggtcagaggac
atgctggagggcactgatgccagccagaaggtacatagcaagcgcctgtccaacggctcc
atggagtcggcccatgaggccagccaggtggtggagctgcaggacctgctggagaagcag
aactatgagctggcccagatgaaggagcgcatgtcctccctgtcgtcccgcgtctccgag
gtggagcaggagctggacaccgcgcgcaaggacctcattaagacagaggagatgagtacc
aagtaccagagggacatcaaagaggtgaggagagaggctatgtgtcagaaggaggacatg
gaagagaggatcgtcactctggagaagcggtacctcagcgcccagagagagtccacctcc
ctgcacgacatcagtgacaaactggagaatgagctggccaataaggaagccttcctcaga
cagatggaggataagaacaggcagctgctggagcgtttggagctagcagagcagaagctg
cagcagaccatgagaaaggctgagaccctgccagaggtggaggctgaactggcccagagg
atagcagcactcaccaaggcagaggagcgtcacggcagtatcgaggaacgcatgaggcac
ctggagggccagctggaggagaagcaccaggagttgctcagagctcggcagagagaaaag
atgaacgaggaacacaacaagcgcctgtcggacacggtggacagacttctcacagagtcc
aacgaacgtcttcagctccacctgaaagagaggatggctgctctggaagagaagaacgtt
ttaatacaagactcggaaggctacagaaaacagtacgaggattcaatccatgaaaaaact
catctggcagatgagatagacaagctgagatcagagttggaccagttccgactgagaaca
ggctcactcacagaacccactctgtcacggtatgggtctcacctggacacgtcgggggag
ctccgattctcccttggctccctggctgagacccagtcagaccactaccggtcagccaag
gtcatccgcaggcccaggagaggacgcatgggtctccacagggacgagagcaaggctaag
tcactgggggagcacgagtggcgctctcagcagttaggcatcctgggtagccaccccttt
gagagtgagatgtctgacatgtcggacattgatgacgatgaccgggagaccatgttcagc
tccatggacctgctgtcccccggcggtcactcagacgcccagaccctagccatgatgctg
caggagcagctggacgccattaacaaagagatacgactgatccaggaagagaaggagtcg
acagagctacgggcggaggagatagagaaccgcgtggccagcgtcagcctcgagggtctc
aacctggcccgtatgcaccaccccggagcctccatcaccgcctcggccaccgcctcctcc
ctggcctcttcctccccgcccagcggacactccacccccaagctggaccaccgtagcacc
acagacatggagcgcatgggtatcatgacactgcccagtgatctgaggaaacacaggaga
aagattgcggccaccgacgatgacggccaggacaaggctaccatcaagtgtgagacgtcc
cctcctcccacgccccggaccgtacgcatgactcgcacactgccagcctcctcacacaac
gaggcccgaggcattgctgccaacctggaggcagaggccagtgctctgagcagcgtagcc
agcagtcaggactccatcaacaagcagcccaagaagaagggcatcaagtcctccatcgga
cgcctgtttggcaagaaggagaagaccagactggcacagctgcatgcccacagggaggcc
atcgggcagagccaaggagtatctgatccagacctgggtcaggacatggctgtggggaag
ctggggactcaggctgagaaagaccgccggctgaaaaagaagcacgagttgttggaagag
gcgaggaggaaaggcttacctttcgcccaatgggacggccccacagtggtggcctggctg
gagctgtggctggggatgcccgcctggtacgtggcggcgtgtcgtgccaacgtgaagagc
ggtgccatcatgtcggccctgtcggacacagagatccagagggagattggcatcagtaac
cccctgcaccgcctcaaactacggctggccatccaggagatggtgtccctcaccagtcca
tctgccccgccaacctccagaaccccgtcaggcaatgtatgggtgacccacgaggaaatg
gagaccctcgcagcaccctcctccaaaacgaggtccggggagtccgaggaggggagctgg
gcgcagactctagcgtatggtgacatgaaccatgagtggatagggaacgagtggttgccc
agtctaggactacctcagtaccgcagctacttcatggagtgcctggtggacgcccgcatg
ctggaccacctcaccaagaaggacctccgggtgcatctcaaaatggtggacagctttcac
aggacgagtttgcagtatggtatcatgggtctgaagaagctcaactatgacaggaaagag
ctggagagacgcagagagcacagccagcatgaaatgagagacgtgctggtttggagcaac
gagcgggtgattcgctgggtccagagcatcggcctaaaggactatgccaacatcctgctg
gagagcggcgtgcacggggccctggtcgccctcgatgacaactttgaccacaccagcctg
gcgctgctcatccagatccccaaccaaagcactcaggcacgtcagattctggagagggaa
tataataacctgctagccctgggcactgagagacgactggacgagtatgaagataatgac
ctccgggggccatcgtggaggaggcagttccccccgcgggacgtccatgggatcagtatg
atgcccggctcggcagagaccctccccgctggcttccgcgtcaccaccggctcacactcc
cgtaggctaccccccgaagttggccccttagcagtgcagcatctggacagctctacagtg
aggacctactcctgctga
DBGET
integrated database retrieval system