Oncorhynchus kisutch (coho salmon): 109896526
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Entry
109896526 CDS
T09179
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2-like isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109896526
Membrane trafficking [BR:
oki04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
109896526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
SH3_9
TPR_2
TPR_1
SH3_2
TPR_MalT
SH3_1
TPR_19
Motif
Other DBs
NCBI-GeneID:
109896526
NCBI-ProteinID:
XP_031653750
Ensembl:
ENSOKIG00005040449
LinkDB
All DBs
Position
LG19:54572093..54606215
Genome browser
AA seq
1058 aa
AA seq
DB search
MTNEVTGENRQQDRDISPAELDALWREPPYTLAGTNEHFPGNDVMNPGPGVESGGGEAEP
DSYWKRKEEFTRGSTVSLAVGERFSSDVVLVFSGRRRSGVIPDTELQEALRTRLRVVESN
SQDVIQLFKDLSARLLSVHAEKDSFVITFKTVEEMWKFSTYLALGYVARCLENFLCDQSF
WLDTELLRDLEITVTVDEEHLATLYLGLLLQEGSFFAKALVSSGEHSDEEEELCFRCNDL
LMVRDTGQDSHWEGTLLSTGKHGLVPVNNMQPLPYPFFQWFLRKYPGCAGCSPSERGQFD
HPIVTGSCEAVVDHNPVGCDELQLSRGDLIEIQGMLLRGLDLFIGTHCSTGNTGFVHKAH
VKPLNAKPLDGQLVFLTEEERASLSQVNPCSTEPRDSDLLERLFSSDISTVYKLDRLDQS
DFTYIRNQPEQEHKPPTSSRQSIISEKSDATLPYHFSYAPQNAVGRGGDGELLSFSLDDT
FREMNEFQDDPPLFLEEGEESEVCDPTLTLLNMHHFQEDFLPLYDLHHSFLWLTFSGQSE
EELLGHLEIVREGAKRMGMAWAHRRACFLLGRLCAKKLKYSQARVYYEEALGVSVDGFSD
LPLLIALYTNLTAIYLKQKMADKLPPALEKASALLLCLPSHTFTSLDEFELLKLVLRRSV
VEGNKHLEARACYLTASLFLLLRKIDDALPFAERLQFLTVTLSAEEGRPIAPLDLNWLLS
RLYHRKYMPYLALASLSLDTGQDHSLQDAFHRIELFSRNSVRLNPRWKEGTSLLPAQIVV
YLQQALAIAERGDDLKTQRDLCLGLACVYQQHGALEKALPCAQQAVQTGGGINEEEGFEA
SVLLGWLLVLTGQPERAQNTLQPLLQSLEGTDSPTQRGVIHNLLALCLRQQGGIPEAGSH
LHHALTISRESGNQRNQALALANLGCLALGVGAPTLAERFLFRSLWLFLEIWESPVDEEH
VQTYLWLGRSYKDRGRSQDARLCYEMGLLISLQARNLPSQMVVAKVLSRHYADVLLYGQS
ILYYEHCVSVSRDLKDKRLEGEYLEILSSLYLSLNTEK
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgaagtgacaggagagaacagacagcaggacagagacatctcccctgctgag
ctggatgcactatggagagaaccaccgtacacgctagcgggaaccaatgagcacttccca
ggaaatgatgttatgaatccagggccgggggtggagtctgggggcggggaggcggagccg
gacagttactggaagaggaaggaggagttcaccagaggaagcaccgtatcactggccgtg
ggtgagaggttctcctcagacgtggtgctggtgttcagcggtcggcggcgctcgggtgta
atacctgacactgaactacaggaggcgctccgtaccagactcagggtcgtcgagagcaac
agtcaggatgtcatccagctcttcaaggacctgtctgcccgtctgctgtctgtccacgct
gagaaggacagctttgtcatcaccttcaagactgtggaggagatgtggaagttctctacc
tacctggctctaggctatgtggcgcggtgcctggagaatttcctgtgtgaccagtcattc
tggctggacactgagctgctgagggacctggagatcactgtgactgtagacgaggaacac
ctggcaacactctacctgggactgctgctgcaggaggggtcgttctttgccaaggcgctg
gtgagcagtggcgagcacagtgatgaggaggaggagctgtgtttcagatgtaatgacttg
ctgatggttagagacacggggcaggacagtcactgggagggcacccttctctccactgga
aaacacggactagtgcctgtcaacaacatgcaaccgctgccataccccttcttccagtgg
ttcctgaggaagtaccctggctgtgccggatgctccccatcagagagaggacagtttgac
caccctatagtaactggttcctgtgaggctgtagtggaccataacccagtaggatgtgat
gagctccagctgagtcgaggtgacctgattgagatacagggaatgctactccgaggtctg
gacctgttcataggaacacactgctctacaggaaacacaggcttcgtacacaaggctcac
gtgaagccactcaacgccaaaccactagatggacaacttgtgtttctgactgaggaggaa
cgtgcgtctctgtcccaggttaacccctgtagtactgagcccagagacagtgacctccta
gagagactcttctcctctgacatcagtactgtctacaaactagacagactggatcagtct
gattttacgtacatcagaaaccaacctgaacaagagcataagccccccaccagtagccgg
cagtccatcatctcagagaagagtgacgctacactcccataccacttctcctacgcaccc
cagaatgctgtagggcgtggcggtgacggggagttgctgtccttcagtctggacgacacc
ttcagagagatgaacgagttccaggatgacccaccccttttcctggaggagggggaggag
tcggaggtctgtgaccccaccttgaccctgctcaacatgcatcactttcaggaggacttc
ctgcccctgtatgacctccaccactcattcctgtggctgacgttctcagggcagagtgag
gaggagttactgggccacctggagattgtcagggagggggccaagagaatgggcatggcc
tgggcacaccgacgggcatgcttcctactggggaggctctgcgccaagaagctcaagtac
tcccaggcccgtgtgtattacgaggaagcccttggagtctctgtcgacggtttctctgac
ctccctctcctcatcgccctctacaccaacctcacagccatctacctcaaacagaagatg
gccgacaagctgcccccggccctggagaaggccagtgctctgctcctctgtctccccagc
cacaccttcacttccctggatgagtttgagctgctgaagctggtgctgcggaggtctgtg
gtggaagggaacaaacacctggaggcacgggcctgctatctcaccgccagcctcttcctg
ctccttagaaagatagatgatgccctgcccttcgcagagcgtctccagttcctcactgtt
accctgtctgctgaggaggggcgccccatcgcccccctggacctcaactggctcctgtcc
cggctctaccaccgtaaatacatgccctacctggccctggcatccctcagcctggacact
ggacaggatcactcactacaggacgccttccacaggatagaactgttcagcaggaactcg
gtacgtctgaacccgcgatggaaagaagggacgtctcttctcccagcccagatcgtggtg
tacctgcagcaggctttggcaattgcggagcggggtgacgaccttaagacccagagagac
ctatgtctgggcctggcctgtgtttaccagcaacacggggccctggagaaggccctgccc
tgtgcccagcaggctgtacagactgggggcggtattaacgaggaggaggggtttgaggcg
tcagtactgctgggatggctgttagtcctgacgggacagcctgagagggcacagaacacc
ttgcagccactattacagtctctagagggaaccgacagcccgacccagaggggagtgatc
cacaacctgctggctctgtgtctgcggcagcagggtggcatccccgaagccggcagccac
ctccaccatgccctcaccatctccagggagagtggcaaccagaggaaccaggccctggcc
ctcgccaacctgggctgcctggcactgggcgtgggggcacccacactggcagaacgattc
ctattcaggtctctgtggttgttcctggagatctgggagagtcccgttgacgaggaacac
gtccagacctacctatggttggggcggagctacaaggacagggggaggagccaggatgcc
aggctgtgttatgagatgggcctcctcatctccctccaggccaggaatctacccagtcag
atggtggtggctaaagtcctgagtcgtcactatgccgacgtgctgttgtatggacagagt
atcctctactatgagcactgtgtgtctgtgtccagggacctgaaggacaagagactagag
ggagaatatctagagatcctcagtagcctctacctgtccctcaatactgagaagtag
DBGET
integrated database retrieval system
