Oncorhynchus kisutch (coho salmon): 109896591
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Entry
109896591 CDS
T09179
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109896591
03036 Chromosome and associated proteins [BR:
oki03036
]
109896591
Membrane trafficking [BR:
oki04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109896591
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
109896591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
IQ_SEC7_PH
Beta-prop_RSE1_2nd
SOS1_NGEF_PH
RHG20_PH
DUF7675
Motif
Other DBs
NCBI-GeneID:
109896591
NCBI-ProteinID:
XP_020346461
Ensembl:
ENSOKIG00005030589
LinkDB
All DBs
Position
LG1:complement(28680524..28792058)
Genome browser
AA seq
1301 aa
AA seq
DB search
MSTVNYQQQQREEEEEEDEEQGEKFEFDDSADEKDPVEAMQTANESSMEATSQPQDNAVT
TPLAHSQQHLNAMPPAGQEDNPSQGQDSTASSDVPVSNPPRRVSGPVELIEPIAAAPSVG
EQPREESQERSGPGDMLPVENQTDSVDHSLETEKKSSSLREHSEGEGVDDDEADAALQTG
SPEVIYDDVPCEGPLSPDEGDMIYEDVHREEMPQGAGNGWSSSEFESYDEQSDTESKLPT
RSKQYSPDVRRLRERCARTKREIAMRLGGKNNYDTKVHQLMKAARSGTKDGLDKTKIAFM
RRVSFLHKKDHSEDVEDDAGYLDVAVSEVKQPPAQLSPMPEGLSSQQVVRRHILGSIIQS
ERSYLESLRRILQEYQRPLLEADPRILSPRKIRPIFHRLREITQCHSMFQIALASRVAEW
DSSEKIGDLFVASFSKSMVLDVYSDYVNNFTNAMALIKKACMSKPAFLEFLKKKQASSID
RITLYGLMVKPIQRFPQFILLLQDMLKNTPKGHVDRLPVQLALTELEMLAEKLNEQKRVA
DQIAETQQLARSVSDRLLCKQLNSDQGSLVLCETLIETVYGDRGQVLKSKERKVFLFNDI
LICANINIKGPPDISSLVPVGPKYTMKWSAPLLQVQVVEVGQEASQAKDTLFQHGGAKHP
GSACPPGKVILGPPRLYQELQELQHDLSVVEEISLLVGTLQGTYQNLNTTVAQDWCLALQ
RLIRIKEDQIQSANKCRLRLQVPGRPDKSGRPVSFMVVFNTPSPLSKISWVNRLHLAKVA
QREENTPGWFCAEDEGKTMAPFWPLLTCRVPVFSTKSSDRKLEAALHNPVQCALLGFSAA
STSLPQGYLWVASGGDATQGQVEIFSLNRPTPRPVKSLQVGAPVRCLEYVPEPSTPEEME
AVALRSPTGVGNTICLGLDDGSILVYGSVDTAAQCLLTLCNPQRCPVLCLKHSINFLFAG
LRDGTMMVYGRSNGGELWEPDTCRTVSVGPEPVRTLLVLEDSVWASCANSVTVIKGSSLS
TQRFEVHPEPMVSVAHMVRAGGGVWMAFSEGSSIRLFHTETLEHLQEINISTRVSLHNPG
QKSMRVTSLLLCQGLLWVGTAQGVIITLPVPKLEGIPKITGKGMTSLNAHCGPVDFLVAT
SSTLSAELLKRDSVGDGPDSACGGEDRSDSSSQESLQQSGCSQGEGRGKGRGVLLQYRLR
STSGLPGRALTARGDEASDSSLESLEQRLEDGSIYELSDDPEMWVRGRPCERDRGRRDRV
TSAAVISGGRGFQRLREGTAERTGVESSETTLMVWQLPLTV
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgtgaattatcagcagcaacagagggaggaagaggaggaggaagatgaagag
caaggagagaagtttgagtttgatgacagtgctgatgagaaagacccagtggaagccatg
caaacggcaaacgagtcatctatggaggccacaagccaaccacaggacaatgcagtaaca
acaccccttgcacactcacaacagcacctcaatgcaatgccccctgctggtcaggaggac
aatccttcacagggacaagactccacggcctcttcagatgttccagttagcaacccaccc
aggcgagtctctggcccggtcgagctgattgagcccatcgctgcagcaccttcagtggga
gagcagccccgggaggagtcccaggaaaggtctggtcctggagacatgttaccagtggag
aaccagaccgactcggtggaccatagcttggagactgagaagaagagctccagcttgaga
gaacactctgaaggtgagggggtggatgatgatgaggccgatgcagcactccagacaggg
agcccggaggtgatctatgatgacgtgccctgtgagggaccactctcccctgacgaaggg
gacatgatctacgaggatgtgcacagagaagaaatgccacagggtgcaggcaatggttgg
agctccagtgagtttgaaagttacgacgagcagtctgataccgagagcaagctaccaacc
cgcagcaagcagtactcccctgacgtgcgtcggctgagggagcgttgtgccaggaccaaa
cgtgaaatagccatgaggctgggtgggaaaaacaactatgacaccaaggttcatcagcta
atgaaggccgctagaagtgggaccaaggatggattggacaagaccaaaatagccttcatg
cggagagtctccttcctgcacaagaaggaccactcagaggatgtggaggatgatgcaggg
tacctggatgtggctgtgtcggaggtgaaacagcctcctgcacagctgagccccatgcct
gaggggctgagcagccagcaggtggtcagacgccacatcctgggttccatcattcagagt
gagcgcagttatcttgagtccctcaggagaatccttcaggagtaccagaggcccttgcta
gaggcggacccacgcatcctgagcccacggaagatccggcccatatttcaccgtctacgg
gagatcactcagtgtcactccatgttccagatcgcactggcatcacgtgtggctgagtgg
gacagcagtgagaagattggggacctatttgtggcctcgttttccaagtccatggtgcta
gatgtttacagcgactatgtcaataacttcaccaatgccatggccctcataaaaaaggca
tgcatgtccaaaccagctttcctggaattcttaaagaagaagcaggcgtccagtattgat
cggatcaccctgtacggcctcatggtgaagcccattcaacgctttccccagttcatccta
ttactgcaggacatgctgaagaacacacctaagggtcacgtagatcgcctgcctgtgcag
ctggctctgactgaactggagatgctggccgagaagctgaatgaacagaaacgtgtggcc
gaccaaatagctgagactcagcagctagcacgcagtgtcagcgaccgcttgctctgcaag
caactgaactcggaccaggggtcactggtgctttgtgagacgttgattgagacggtgtac
ggggatcgtggccaggtcctgaagtctaaggagcgcaaagtcttcctcttcaacgacata
ctcatctgtgccaacatcaacatcaaggggccccctgatatcagcagcctggtccctgtt
gggccaaagtacacaatgaagtggagtgcccccctgctgcaggtccaggtggtggaggtg
ggtcaggaggcctcccaggccaaggataccttgttccagcatggcggtgccaagcaccct
ggcagtgcctgtcccccagggaaggtgatcctgggtcctcctcggctctaccaggagctc
caggagctgcagcacgacctgtctgtggtagaggagatctcactactggtgggaacgcta
caggggacataccagaacctgaacacgaccgtggcccaggactggtgtctagctctccag
agactcatccggatcaaggaggatcagattcagagtgccaacaagtgccgcttacgcctg
caggtgcctggaagaccagacaagtcgggacgtcccgtcagcttcatggtggttttcaac
acccccagtcccctcagcaagatctcctgggtcaaccggctgcacctggccaaggtcgca
cagcgagaggagaacacaccaggatggttctgtgcagaagatgaagggaagaccatggca
ccattttggcctttactcacctgccgtgtgcctgtcttctccaccaaatcctcggacagg
aagcttgaagctgcccttcacaatccagtgcagtgtgctttgctgggcttctctgcagcg
agcacctcgctacctcaaggctatctctgggtggccagtggaggagatgctacccagggg
caggtggagatcttctccctgaacaggcccacaccacgcccagtgaagagcctccaggtg
ggggccccagtgaggtgtctggagtatgtgcctgaacccagcaccccagaggagatggag
gctgtggccctcaggagccctactggggtggggaacaccatttgtctgggactggatgat
ggaagcatcctggtgtatggcagtgtggacactgcagcccagtgcctgttgaccctgtgt
aaccctcagcgctgtcctgtcctgtgtctcaaacactccatcaacttcctgttcgctggg
ctcagagatggaaccatgatggtgtatggacgaagtaatggtggtgagctgtgggagcca
gacacctgcaggactgtgagtgtgggcccggagcctgtgcgaactcttttggtactggag
gactctgtgtgggccagctgtgccaactctgtgaccgtcatcaagggctccagcctttcc
actcagaggtttgaggtgcacccagaacccatggtgagcgtggcccatatggtgcgggct
ggaggaggagtctggatggcctttagtgagggctcttctattcgcctgttccacactgag
acactggagcatctgcaggaaataaatatctccacacgagtatctttgcacaacccaggc
cagaagagcatgcgtgtcaccagcctgctcctctgccaggggcttctgtgggtggggact
gcccagggagtcatcatcaccctgcccgtgcccaaactggagggcattcccaaaataaca
ggaaaagggatgacctctctgaatgcccactgtggtccggtggacttcttggtggccacc
tccagcaccctgtccgcagagctgctgaagagggactctgtgggggatggacccgactct
gcctgcggaggggaggaccgcagtgactcctcctcccaggagtctcttcagcagtcaggc
tgttcccagggggaggggcggggcaaggggcggggtgtgctgctacagtacaggctacgc
tccacgtcagggttgccagggcgagcactgacagcacggggcgatgaggcgtctgactcc
tctctggaatctctggaacaaagactggaggatggctccatctatgagctcagtgacgac
cctgagatgtgggtgcgggggcgcccctgtgagcgagatagggggcgtagggacagggtg
acctcggccgcggtcatatccgggggcaggggcttccaaagactgagggaagggacagca
gagcgcacgggtgtggagtcttcagaaacaaccctgatggtatggcaactgccactaact
gtgtga
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