Oncorhynchus kisutch (coho salmon): 109896725
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Entry
109896725 CDS
T09179
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109896725
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109896725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
109896725
NCBI-ProteinID:
XP_020346632
Ensembl:
ENSOKIG00005010624
UniProt:
A0A8C7DPA4
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All DBs
Position
LG9:complement(9997455..10005090)
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AA seq
941 aa
AA seq
DB search
MVQLSPSPARDVSPSPECSEKGRQGSPKIGSPGGLSPLQLALAASTTIYQGYESYIEDGL
ICLKHKIRNLEKKKIKLEDYRKRLKHGESLNQDQIDAVEKYDEVIHNLQFAQELHKTLGG
LTQELLKAQKKALRKEQMVKQEVERRRLCIVLQVKFLLQTLLQHEHIRKDLLSARNPQLK
VAELHSLLELAELLGVKRDNNVSLEDQMDRAALVYLDLLEGKNKAVAGTTYKVLKAKLAT
LMDCGYFDCVPPPPTKSPKEVEDPMTKKTVSETASLSTLMMSNKKDVPSREFLNRHYLPD
TDPNGCRDAPVTPNWKAEFQAMKEQEPPDSWDMESDSTQPVIQKPWRGAAVLISKVPVTS
KKQNAEPKQRRAKSKRERDATAALRVDTPVEVFNSQSSLPKDPILRKQQLEDLMTKIRGS
FSFMQDSLLDGEGSPTNGHPRLGRHASGSPSPLVQRDSRRSPVDLLPKTLHSTPLLSKLL
PVDDKPSLTNGDGGCLESCDLDLTTEDLAHVIAIDPCLLLSESETACPSPPAPPPLYRRE
SSISITLDEKTSARTPISESGKQSPCNGVVPPCTPTQGQPFSTPPSRRTLTMAPPVPFQT
MHSVFKVNAPLLPTVDFKSDIIPYSDSNGLCYVTTSTQTPPEFAPSEDEQLQSVNQSECL
VGSGGQIFLSPGQSGGTMGRSDQSYYRGSVRGIARGGKGLAHSYFRSSGGHRGGSFIPQA
HLYGARDIGYQHSYRRGGGNTGQRHNNSGWSDSSQVSSPDREGNYSLVDSAHGDSLQGVG
MDLTTQVTPHAPHTLMHVPMYPLPQHPQHLRVAFTAARTANYTPGTLDQPIAFDQLHSNL
GEMFNTNVGRFTCPANGTYVFLFHILKLAVNVPLYVNLMRNDEVMVSAYANDGAPDHETA
SNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctttctccatccccagcccgggatgtctctccttcacctgagtgctcagag
aaggggaggcaggggagccccaagattggctcccctggtggactgagtcctctccagctg
gccctggcagcctccaccaccatttaccagggctacgagagttacatcgaggacggcctc
atctgcctcaagcacaagatccgcaacctggagaaaaagaagattaaattggaagactac
aggaagcgtttgaaacacggggaatcactcaatcaagaccagatagatgcagtggagaag
tatgacgaagtgatccacaacctgcagtttgcccaggagctgcacaagacccttggtggc
ctaacacaggaactgctaaaggcccagaagaaggcgttgaggaaggagcagatggtcaag
caggaggttgagaggagaaggctgtgcatagtgctgcaggttaagttcctcctgcagacc
ctgctgcagcacgagcacatcaggaaggacctcctctctgcccgcaacccccagctcaag
gttgcagagctacatagcctgcttgagcttgctgaactactgggggtgaagagggacaac
aatgtgagtttggaggatcagatggacagagcagccctggtctacctggacctgctggag
gggaaaaataaagccgtagccggaaccacctataaggtcctgaaggctaagttggcgacg
ctgatggattgtgggtactttgattgtgtaccgccgccaccgaccaagagtcccaaggaa
gtggaggatcccatgaccaagaagacggtgtctgaaacagccagcctctctaccctaatg
atgtcaaacaaaaaagacgtgcctagcagagagtttcttaacagacactacctgcctgac
acagaccccaatgggtgtcgagacgctcccgttactccgaactggaaggctgagttccag
gctatgaaggaacaggagccaccggactcatgggatatggagtccgactccactcagcct
gtaatccagaaaccatggagaggggcggctgtgttaatctccaaagttccagttacctcc
aagaaacaaaatgccgaacccaaacagagaagagcgaagtccaaaagggagcgggacgcc
acagctgcacttcgtgtggacacccctgtggaggtgttcaactcccagtcttccttgccc
aaggaccccatcctgcgcaaacagcagctggaggacctgatgaccaagatcagaggctcc
ttcagcttcatgcaggattctcttctggatggggaaggatcacccactaacggccatcct
agactgggccggcatgcctctggatccccctctccactcgtacagagagattcgaggaga
agcccagtggaccttctccctaaaacactgcattccactccattgctttctaaactcctc
cctgttgatgacaaacccagtctgaccaatggagacgggggttgtctagagagctgtgac
ctggacctgactacagaggacctggctcacgtcatagccattgatccatgtctgctgctg
tctgagagtgagactgcctgcccctctcctccagctcctcctcccctctaccgtagggag
tcctccatctccatcaccctggacgagaagacatctgctcggactcccatctctgaatcc
ggtaagcaatccccctgtaacggggtggtgcctccttgtacccccacccaagggcagccc
ttttcaacccctcccagcagacgtacactcaccatggcgccccctgttcccttccagacc
atgcattcggtcttcaaggtgaacgcccccttacttccgactgtagactttaaatccgat
attatcccctattcggactccaacggcctgtgctatgtcaccaccagcacccagacccca
ccggagtttgctccgtcggaggacgaacaactacagtcggtgaaccagtctgaatgtctg
gtaggtagtggtgggcagatcttcctgtcccctggccaatcgggtggcaccatgggccgt
tctgaccaatcatactacagaggatctgttagaggtattgcacgtggtggcaaggggctg
gcacactcctactttcgctcttctggtgggcacagaggaggaagcttcatcccccaggct
cacctgtacggagctcgggacattggctaccaacacagctacaggcgcggtggaggcaat
acaggacaaaggcacaataatagtggttggagtgattcttcccaggtgagcagcccagac
cgggagggcaactactccctggtggactccgcccacggtgactcgctgcagggtgttggc
atggacctcaccacccaggtgacccctcatgccccccacaccctgatgcacgtacccatg
tacccgctcccccagcatccccagcacctccgcgtggccttcacagcagcccgcacagcc
aactacaccccgggcaccctggaccagcccatcgcctttgaccagctccacagcaacctg
ggggagatgttcaacaccaacgtgggtcgtttcacctgcccagccaacggcacatacgtc
ttcctcttccacatcctcaagctggcggtcaacgtgccgctctacgtcaacctgatgcgc
aacgacgaggtgatggtgtcagcgtacgccaacgacggggctccggaccacgagacggcc
agcaaccactccatcctgcagctgtaccagggagaccaggtgtggctgcggctgcaccgc
ggctccatctatggcagcagctggaagtacagcacattctctggctttctgctctaccag
gactga
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