Oncorhynchus kisutch (coho salmon): 109896791
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Entry
109896791 CDS
T09179
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109896791
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109896791
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
OVT1
Motif
Other DBs
NCBI-GeneID:
109896791
NCBI-ProteinID:
XP_031687811
Ensembl:
ENSOKIG00005012258
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All DBs
Position
LG9:complement(14453918..14483341)
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AA seq
1781 aa
AA seq
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MLILHIASLLTLGWRSFAQLPEFGDVCTEGSCYPATGDLLIGRAHKLTASSTCGIEKPER
FCIVGHLEEEKKCFVCDSREKYDERMNHTTSHSIENLVTTFAPNRLKTWWQSENGVENVT
IQLNLEAEFHFTHLIMTFKTFRPATMVIERSMDFGEKWQVYRYYSYNCESAFPGISVGPM
VKVDDIICDSRYSDIEPSAEGEVIFRVLDPAFEIEDPYSPRIQNMLKITNLRVQFTKLHT
LGDNLLDSRDEVTEKYYYALFDMVVRGNCFCYGHASKCAPVDGIHVGTEGMVHGHCMCNH
NTEGLNCEHCKDFYNDLPWRPAEGRNTNACKMCECNHHSRSCHFDMAVYLSTGNVSGGVC
DECEHNTMGRQCEQCRPFYYQHPERHLRDPNICEPCSCDPTGSLQGGVCDGRTDVSAGLI
AGQCRCKTSVEGERCDHCRQGHYGLGQGPNGCLQCTCNPLGTLPGGSPCDMDTGNCFCKR
LVTGRNCDRCLPQHWGLSNDMDGCRPCDCDQGGAVNNDCSPISGQCQCREHMYGRRCDQV
ESGYYFFALDHYTYEAEEAKHGPGVTVVPRPYPLNRSPTWTGAGFVKVPEGAHLEFHINN
LPDSMDYDMLIRYEPQLPDQWEQVEIRVIRPYSMRVGQPASPCENTLQGGDQQLVSLLPG
SRHVLLPRPVCLEEGRNYTVRLSLPLYSSLSDVQSPYTLIDSLVLIPRVRKLLLFEGSQG
VEAWDTFQRYRCLESSQSVIKSPMTDICNNYIFSVSALLHQGAMACQCDSQGSFSAVCDP
SGGQCQCRPNVAGRNCDRCAPATFLFSPLGCRRCECSPPGSVNAFCHEATGQCECVPGAS
GRQCAHCLPGYWGFPQCQPCQCNGNSDYCHPQTGECQGCRAFTTGHMCERCLDGYHGDPV
LGLGGHCRPCMCPDGPGSGRQYADSCYQTADNYQLVCACSPGYRGARCDECAPGHYGNPQ
VPSGRCLPCQCNDNIDQLDPGSCDARTGVCLKCLHHTKGYGCQRCKLGYYGNAASQSCRR
CMCYSVGTMSEACPSPGECHCDLQTGQCPCRPNVIGQNCDRCALDTFNIGSGKGCQTCDC
DPTHSFGTSCNELSGQCSCRSGFGGRKCNECRDKFWGDPEVKCQACDCDLRGIASEQCHR
SSGQCVCVEGVSGPRCNQCARGYHGTFPACERCHQCFAEWDRVVGELSNQTQRLKDHVTE
LQTSGVTTPYKDTISSLEFSANAISAIVENNPAIQKMEDVQQMMQQATELVADLNERLNV
SEDSLSRLVVNANDTEASLDALRKQAQELERTVTDIRDHIKTVKNSNIEGAMDTITKAHL
ESKRAEIRANQTTSYPDNTLEQSATLRREAEARLSQNQAEFDLRQQKHTERLERLATELN
TLDLLELSKQTCGAAGGEEGCSASPCGGVGCVSEDGNLRCGGEGCEGLVTQTQSTLKTAK
DFDQEILSTLQEVDKLSRMVWEVKVRAGEAKLNAQEVLLKSNQSRDRVEQSNEQLRSLIK
EIRGLLTNDRAKVEVIEAVSNEVLALEMPTSPEQLEALTKEIRDRVGTLTSVEDILSQSA
NDIHTAERLLEQARTASQEVSEMKETAALVKEALETTERAQNAAIDAVKQAHNNTRGTLD
LITSVESETAESELCLSNATLRLLQLERDVTLLRESSLGTSHHTQHTERLSETARQDAEQ
ALQEFDLEVKGKYSVVEGLVVTKAEGVSDARKRAELLQQEAKELLTQSSVKLQRFRELER
SYAANQRTLEAKTVQLAGLEKTARQLLNDISQKVMVYSTCS
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgctgatattgcacatcgcatcacttttgaccctcgggtggcgctcctttgcccagctc
ccggagtttggggatgtgtgcactgaggggagctgctaccccgccaccggggaccttctg
atcggccgtgcgcacaagctcacggcctcctccacctgcggcattgagaagcctgagcgc
ttttgcatcgttggtcacttggaggaggagaagaagtgttttgtgtgtgactccagggag
aagtatgatgagaggatgaaccacaccaccagccacagcatcgaaaacttggtcaccacc
ttcgcccccaaccgcctcaagacctggtggcagtctgagaatggggtggagaatgtgacc
attcaactgaacctggaagctgagttccacttcacacatctcatcatgacttttaagacg
ttccgtccagctaccatggtgatcgagcgttccatggattttggggagaagtggcaggtg
taccgttactatagctataactgtgagtccgccttccctgggatatccgtgggacccatg
gtcaaagtggacgacatcatctgtgactctcgctactctgacatagagccatccgcagag
ggagaggtgatattcagggtgctggacccggcgtttgagattgaagacccttacagtccc
aggatacagaacatgctgaagatcactaacctgcgtgtccagttcactaagctccacaca
ctgggtgacaacctgctggactccagagacgaggtcacagagaaatactactatgccctc
ttcgacatggtcgtccgcggcaactgcttctgctacggacatgcctccaaatgcgcccct
gttgatgggatacacgtaggcacagagggcatggtccatggtcactgtatgtgtaaccac
aacacagagggtctgaactgtgagcactgtaaggacttctacaacgacctgccctggagg
cctgcagagggacgcaacaccaatgcctgcaagatgtgcgagtgtaaccaccactccagg
tcatgtcactttgacatggctgtgtatctgtctacggggaacgtgagtggaggagtgtgt
gatgagtgtgaacacaacaccatggggcgtcagtgtgagcagtgcagacccttctactac
cagcaccccgaaagacacctgagagaccccaacatctgtgaaccgtgtagctgtgacccg
acgggctccctgcagggtggtgtgtgtgacggcaggacagacgtgtccgctggtctgata
gcagggcagtgtcgctgtaagaccagtgtggagggagagcgctgcgaccactgtagacag
ggacactacggcctgggacagggaccaaacggctgcctgcagtgtacctgtaatcccctg
ggcacactgcctggaggaagcccatgtgacatggacacaggaaactgcttctgcaaacgc
cttgtcaccggcaggaactgcgaccggtgtctgccgcaacactggggcctgagtaatgac
atggacggctgcagaccatgtgactgcgaccagggcggagccgtcaacaatgattgttct
ccgatatcaggccagtgtcagtgtcgagaacacatgtatgggaggcgttgtgaccaggtg
gagtcaggatactacttcttcgccttggaccactacacctacgaggctgaggaagccaag
cacggccctggtgtgacggtggttcccaggccctatcctctgaaccgtagtcctacctgg
acaggggcagggtttgtcaaggtacctgagggagcccacctggagttccacatcaacaac
ttacccgactccatggactacgacatgctgattcgctacgaaccacagttgcctgatcag
tgggagcaggtggagatcagagtgatacgtccgtactcaatgagagtggggcagccagcc
agtccatgtgaaaacacgcttcaaggaggagatcagcagttggtgtctcttcttccagga
tccagacatgtgctgctcccgaggcctgtgtgtctggaggaggggcggaactacactgtg
cgtctcagtctgcctctttactcctcactcagtgacgtccaaagcccctacacgctcatc
gactccttggtgttgattccgcgggtgcgtaagctgctgttgtttgagggttctcagggc
gtggaggcgtgggatacgttccagaggtaccgctgtctggagagcagccaaagcgtcatc
aagagccccatgacggacatctgcaacaactacatcttcagtgtgtctgccctgctacat
cagggggctatggcgtgccagtgtgactcccagggctcttttagtgcagtgtgcgacccc
agcggcgggcagtgccagtgtcggcccaatgtggcaggcaggaactgtgaccgctgtgct
cccgccaccttcctgttcagccccttaggatgcagacgctgtgagtgtagtcctccgggc
tctgtgaacgctttctgccacgaggccacaggtcagtgcgagtgtgttccaggggcgtca
gggcgtcagtgtgcccactgcctgccaggctactggggcttccctcaatgccagccctgt
cagtgcaacggcaacagcgactactgccaccctcagaccggggagtgccagggctgccgc
gctttcaccaccgggcacatgtgtgaaaggtgtctggatggttaccatggtgacccagtg
ttgggtttggggggtcactgccgcccctgcatgtgtcccgacgggccggggagcgggcgc
cagtacgcagacagctgctaccagaccgccgacaactaccagctggtctgtgcctgcagc
cctggatacagaggagccaggtgtgacgagtgtgccccaggtcactatggtaacccccag
gtgcccagcgggcgctgtctgccctgccagtgtaacgacaacatcgaccagctggacccg
gggtcctgcgacgctcgcacaggcgtctgcctcaaatgcctgcaccataccaagggctat
ggctgccagcgctgcaagctgggttactacggcaacgccgccagccagagctgcaggagg
tgtatgtgttattcagtgggcacaatgtcggaggcgtgtccgtctccgggggagtgtcac
tgtgacctgcagactggccagtgtccctgccggcctaacgtgattggccagaactgcgac
cgctgtgcccttgatacgttcaacattggaagcggaaagggctgccagacctgtgactgt
gacccaacccactcctttgggacgtcgtgcaatgagctgtcagggcagtgctcgtgcagg
tcaggttttgggggaagaaaatgcaacgagtgccgagataagttctggggagaccctgag
gtcaaatgtcaagcgtgtgactgtgacctgcgtggcatcgccagcgagcagtgccaccgt
tcgtccggccagtgtgtgtgtgtggagggtgtgtctgggcccaggtgtaaccagtgtgcc
agagggtaccatgggacgttccccgcctgcgaacgatgccaccagtgctttgccgagtgg
gaccgcgtggtaggggaactgtccaatcagactcagcgtttgaaggatcatgtgacagag
ctccagaccagtggggtgacgacgccgtacaaagacaccattagcagtctggagtttagt
gcaaatgctatcagtgctatagtagagaacaaccctgctatacagaagatggaagatgta
caacagatgatgcagcaggccactgagctggtggcagacctgaacgagaggctgaacgtc
tcagaggattccctgtcccgtctcgttgtcaatgccaacgacaccgaggccagtctggac
gcactgagaaagcaggcccaagagctagagagaacagtcacagacattcgagaccacata
aagactgtgaagaactctaacatagagggagcgatggacaccatcaccaaggcccacttg
gaatctaagagggcggagatccgtgccaatcagaccaccagttaccccgacaacactttg
gaacagtcggctacactacggcgtgaagcggaggccagactgagccagaaccaggcggag
tttgacctgagacaacagaaacacacagagagactggagaggctcgccacagagctcaac
actcttgacctattagagctcagcaagcagacatgtggagcagctgggggggaggagggg
tgttctgcgtccccctgtggaggggtggggtgtgtgtcggaggacggcaaccttcgctgt
ggtggggaggggtgtgagggtttggtcacacagacacaaagcactctgaaaacagccaag
gacttcgaccaggaaatcctctccaccctgcaggaagtggacaagctctctaggatggtg
tgggaggtgaaggtgcgtgcgggcgaggccaagttgaatgctcaagaggtgctgctgaag
tccaaccagagcagagatagagtggaacagagcaacgagcagctccgcagcctcatcaag
gagatacgaggcctactcactaacgaccgtgccaaagtggaggttattgaagcggtttca
aatgaggtgttggccctggagatgcccacatcgcccgagcagctggaggccctgaccaag
gagatcagagacagggtgggaaccctcaccagcgtggaggacatcctcagtcagagtgcc
aacgacatacacactgcagagaggctgctggagcaggcccgcaccgccagtcaggaggtg
tctgagatgaaggagacagctgccctggtgaaggaagctctggaaacgactgagcgtgct
cagaatgctgccatcgatgccgtcaaacaggcccacaacaacaccaggggaacacttgac
ctcatcacatctgtagagtcggagacggcggagtcggagctgtgtctgagtaacgccaca
ctgcgtctgctgcagctggagagagacgtgactctgctgagagagagcagcctgggcacc
agccaccacacacagcacactgagagactgtctgagaccgctaggcaggacgcagagcag
gccctgcaggagtttgacttggaggtgaagggtaaatacagtgttgtggagggcttggtg
gtgacgaaggcagagggcgtgtctgacgccaggaagagggcggagctactgcagcaggag
gccaaggagttgctcacccagtccagtgtaaaactacagagattcagagagttggagagg
tcgtatgcggccaaccagcgtactctggaggccaagacagttcagctggccgggctggag
aaaacggcacgccagctgctcaatgacatcagccagaaagtaatggtctacagcacctgt
tcttag
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