Oncorhynchus kisutch (coho salmon): 109896968
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Entry
109896968 CDS
T09179
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
oki03015
mRNA surveillance pathway
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109896968
09122 Translation
03013 Nucleocytoplasmic transport
109896968
03015 mRNA surveillance pathway
109896968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109896968
03041 Spliceosome [BR:
oki03041
]
109896968
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109896968
Spliceosome [BR:
oki03041
]
Complex C
Other components
EJC/TREX
109896968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
109896968
NCBI-ProteinID:
XP_020347036
Ensembl:
ENSOKIG00005015851
UniProt:
A0A8C7M8Z5
LinkDB
All DBs
Position
LG9:25010284..25037293
Genome browser
AA seq
1650 aa
AA seq
DB search
MADEDVTLNGKPLQSLRVADLKAALEQRCLPKSGAKNTLIKRLKGALMLENLQRTSTPHI
GLQPNSQIGEEMSQNSFIKQYLAQQQELLRQRLEREAREAAEADESPAGPEEEEHTEEGN
DSDSYNPDKHRPMPSQPPLTRAEEEGGGGPMMMGKGQGMMGQGMMSRRPDFGPGSVPQES
PDAPGGPGSWMQQRPSLQHGLHHEEPTTPSPPRAVASLSVRVLGDPERQGLPPSMPPRAQ
TQEKEGTAPADDDRPAHSVLHLSRSARAAAGSNRVQEDCDDDDDSSEEDEDEWGPAARRG
GGRGLAPPPHLQQPSPSVPAARERSRRKLQPPQHIPPQQVVHQPPMQLRQPTPPPSPPPE
LSFPLPDTPKQSPPDMDEDPEGAGVSVRPPPGGLQRQDSDSSSRSSSPEPRAKRRPGPLS
LLARKMASEGAYGKRGEGAPADSQTGPRGEASRPGDGVGTSPGAGAGPGVEVVMFPGAAI
THTGGSSSTGHTGFVTVPEVPAPVVIFGSGAQSHPLPLLSVTAVPSITLTTEPQDPSGET
AQKKTEKETKQAEEKERKMKQVVKEEESHLPPWQRGRDLTLPSAPSQFGSGGSEEPVMDQ
GDTQKKSPFGRDKPLSSASGSAMTTTTSPPAIAPKKPRMFSDTSSGSMTSPPKPVQQGSV
VVTTPGELPEPHCISVRPQVVLVSGAQQHTDDTMEVTALNKASVEKPGWKAGGDDEKMEK
ERDSLAQKERASLAEKERVSQVEKERASQVEKERASQAEKERASQAEKERASQAEKERAS
QAEKERASQAEKERASQAEKERASQAEKERASQAEKERASQAEKERASQAEKERASQAEK
ERACLAEKERASLAEKERASLAEKERASLAEKERASLAEKERASLAEKERASLAEKERAS
LAEKERASLAEKERASQAEKERASQAEKERASQEKGTSKPGETRRRGPEETVEVEPMGPV
LPPSYPGMGEDERKGKEDERMRRKEDERKKEAERGRRGERARRRRSSPSSGGDSSSSDSG
SSSSRSSGSTSSQDKKKKTGTGKGRGDEKRRLYKGGEKKQSVREVKQSSLSEPSGPMEVE
RPDPGQTQPTPVGDPQNSEGCMEESTTPKAFAARKISLTTGSKTSPEGAAAAAGGEAESG
TAAGRKRRWGSSTAVNTKKPSISITTDSLKSLIPDIKPSQDAVVDLHPDDIQLSGDEDTT
REDQGLDKGLKIRRTVTQVVPSENQENGQGEQDEEEEEKKPEHDRERTQKEKRKDSYSED
TMESQSSATHDTDAKKVTPSDTLVRRSISQQKSGVSVTIDDPVRTAKQPSPPRGKVSNIV
HVCNLVRPFTLGQLKELLNRTGSVVEDGFWIDKIKSHCYVTYSSTEEAVATRAALHGVKW
PQSNPKVLSVDFCEQNELDFHRGLLAVDPREEHRPQPGVGPGGPKVRPGVLPPLMDGRGD
RGVVGGVRDQWAEREREMERRERTRAEREWDRDKVRDFGGKPGEERERGRRSRSLDRERR
RKERDGREKKADKKDEPPAKLLDDLFNKTKAAPCIYWLPLTEEQANQRGKEREERQKERE
RRRKEQQEEEDKKREEERKERIKSREEGGAAVSTGSVSVRGSEGERERGREREGEKRRDS
GGFRPRGPDTKPSAGFRRSRSRSNPRDKRR
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaagatgttacgctgaatggtaaacctctacaatcgctccgtgtggcagac
ttgaaagccgctttggagcaacgatgcctccctaaaagcggggcgaaaaatacactcatt
aagcgactgaaaggggctctaatgttggagaatcttcagaggacctccactccccatatt
gggctccagccgaactcccagattggggaggagatgagccaaaacagctttataaagcag
tacctggctcagcagcaggagctcctccgccagaggctggagagagaggccagggaggca
gccgaggccgacgaaagcccagcgggccccgaggaggaggagcacacagaggagggcaac
gacagcgattcctataaccctgacaagcatcgccccatgccctcccagcccccactgacc
cgggctgaggaagagggtggaggagggccaatgatgatggggaaaggccaggggatgatg
ggccaagggatgatgtctcgcagaccagactttggcccaggctctgtgcctcaggagtct
cctgacgcccccggaggtcctggatcctggatgcagcagcgtccctccctccaacatggc
ctccaccacgaggagcccaccaccccctccccgccccgagctgtggcctccctctcggtg
cgcgtcctaggagaccctgagcgccagggcctgcccccatccatgcccccccgcgcccag
acccaggagaaggaaggcaccgccccagcggatgacgaccggcccgcccactctgtgctc
cacctcagccgctccgcccgagcagcagctggcagtaaccgtgtccaggaagactgtgac
gatgatgatgacagcagtgaggaggatgaagatgagtggggacctgcggcgaggagaggt
ggcggaagagggttagcccctcccccccatctccagcagccttcccccagcgtgccagcg
gcccgagagagatccagacgcaagctccagcctccgcaacacatcccccctcagcaggta
gtacaccagccccccatgcagctccgccagcccaccccgcccccctctccacccccagag
ctctccttcccccttcccgacacccccaaacagagcccgcccgacatggatgaggatcca
gaaggggctggggtgtccgtccgcccccctccaggtggtctccagaggcaggactctgac
tccagctcccgatccagcagcccagagccccgagccaagcgccgacccggacccctctcc
ttgctggcccgcaagatggcgtccgagggagcttacgggaagagaggcgagggtgcgccg
gcggacagccagacaggtcctcgaggggaggcttccagaccaggagatggagttggcacc
agcccaggagctggagcaggaccgggggttgaggtggtcatgttccctggggctgctatc
acccacacaggaggcagcagcagcacagggcacacgggattcgtcactgtacctgaggtc
cctgcaccagtggttatatttggatcaggagcccagtcccatcctctccctctgctgtct
gtgacagctgtccccagcataaccctcacaaccgagccccaggatccatctggagagacg
gcacagaagaagacagagaaagaaacaaagcaggcggaggaaaaggagaggaagatgaag
caggtggtgaaggaggaggagagtcacctgccgccatggcagcgtggacgtgacttgacg
cttccatctgcgccgtcacagtttgggtctggggggtcagaggagcctgtgatggaccag
ggagacacccagaaaaagtcacccttcggcagggacaaacccctctcctccgcttccggc
tcagccatgacgaccaccacctccccacctgccatcgcccccaagaagccccgcatgttc
tccgacacctcctccggctccatgacctcccctcccaaacctgtgcagcaggggtcagtg
gtggtgaccaccccaggggaactccctgaaccccattgcatatctgtgagaccccaggta
gtccttgtctcaggggcacagcagcacacagacgacaccatggaggtcaccgcactgaac
aaggcatctgtggagaagcctggatggaaagctggaggagacgatgagaagatggagaag
gagcgtgacagcctggcgcagaaggagcgtgccagcctggcggagaaggagcgagtcagc
caggtggagaaggagcgtgccagccaggtggagaaggagcgtgccagccaggcggagaag
gagcgtgccagccaggcggagaaggagcgtgccagccaggcggagaaggagcgtgccagc
caggcggagaaggagcgtgccagccaggcggagaaggagcgtgccagccaggcggagaag
gagcgtgccagccaggcggagaaggagcgtgccagccaggcggagaaggagcgtgccagc
caggcggagaaggagcgtgccagccaggcggagaaggagcgtgccagccaggcggagaag
gagcgtgcctgcctggcggagaaggagcgtgccagcctggcggagaaggagcgtgccagc
ctggcggagaaggagcgtgccagcctggcggagaaggagcgtgccagcctggcggagaag
gagcgtgccagcctggcggagaaggagcgtgccagcctggcggagaaggagcgtgccagc
ctggcggagaaggagcgtgccagcctggcggagaaggagcgtgccagccaggcggagaag
gagcgtgccagccaggcggagaaggaacgtgccagccaggagaaggggacttctaaaccc
ggggagaccaggagaaggggacctgaagagactgttgaggttgagcccatgggacctgtt
ctacccccttcttacccaggtatgggagaagatgagaggaaggggaaggaagatgagagg
atgaggaggaaggaagatgaaaggaagaaggaagcagagcgaggcaggcgtggggagagg
gcgaggcgcaggaggtcatctccctctagtggtggcgactcttcatcctcggactctgga
tcctcttcgtcacgttcctctggctccacctcctcccaggacaaaaaaaagaagactggc
acaggaaaaggaagaggggatgaaaagagaagactgtacaaaggaggagagaagaaacaa
tctgtcagggaggtaaagcagtcttccctgtcagagccatctggccctatggaggtggag
aggccagacccaggccagacccagcccacccctgtcggggacccacagaacagtgagggc
tgcatggaggagagcaccactcctaaagcgttcgctgcacgcaagatctccttgaccaca
ggcagtaagacgtctccagagggagcagcagcagcagcagggggggaggcagagtccggg
accgctgctgggaggaaaaggaggtggggatccagcacggccgtcaacaccaagaaacca
tccatcagcatcaccacagactcactcaagtctctgatcccagacatcaagcccagtcag
gatgctgtggtggatctccaccctgatgacatccagttgtctggggacgaggacaccacc
agggaggaccagggcctggacaagggcctcaagatcagacgcactgtcacacaggtggtc
ccaagtgaaaaccaggagaatggccagggagaacaagatgaagaggaggaggagaagaaa
ccggagcatgacagagagaggacacagaaagagaagaggaaggacagctactcagaagac
accatggagtctcagtcctccgctacgcacgacaccgatgctaagaaagtcactcccagt
gatacgctggtgcgtcgctccatcagccagcagaagtcaggtgtgtctgtcactatcgac
gacccggttcgcaccgccaaacagccctctccgcccagaggcaaagtctccaacatcgtc
cacgtctgtaacctggtgcgacctttcaccctggggcagctgaaggagctgctgaacagg
acaggctcagtggtagaggatggcttctggatcgacaagatcaagtctcattgctacgtc
acttactccagcacagaggaggctgtggccacacgagctgcgctccacggggtgaagtgg
ccccaaagcaaccctaaggtcctcagtgtggacttctgtgagcagaacgagctggacttt
cacagaggcctactggccgtggatcccagagaggagcaccgcccccagcctggtgtgggt
cctggaggtcccaaagtccgaccgggcgtgctgccccctctgatggacgggcgcggggac
cgcggcgtggtcggaggggtgcgggaccagtgggcggagagagagagggagatggaacgc
cgggagaggaccagggcggaacgtgagtgggaccgggacaaggttcgagacttcggaggc
aaaccaggagaggagagggagagggggaggagatctcgctccctggatagagagagaagg
cggaaggagagggacggcagggagaaaaaggccgacaaaaaggatgagcctcctgccaaa
ttactagacgacctcttcaataagaccaaagcagctccctgtatatactggctccctctc
actgaagaacaggcaaaccagaggggaaaagaacgggaagagcgacagaaagaacgagag
aggaggcggaaagaacagcaggaggaggaggacaagaagcgagaggaggagagaaaggag
agaattaaaagcagagaggagggaggagctgcggtaagcactggaagtgtgagtgtccgg
ggatctgagggagagagggagcgtgggagggagagagagggggagaagaggagggacagt
ggtggattcagacccagaggtcctgatactaaaccctctgctgggttccgacgctcccgt
agccgtagcaaccctcgagacaaacgccgttga
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integrated database retrieval system
