Oncorhynchus kisutch (coho salmon): 109896969
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Entry
109896969 CDS
T09179
Name
(RefSeq) LIM domain-containing protein ajuba-like isoform X1
KO
K16682
LIM domain-containing protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109896969
03036 Chromosome and associated proteins [BR:
oki03036
]
109896969
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109896969
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
109896969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
109896969
NCBI-ProteinID:
XP_020347039
Ensembl:
ENSOKIG00005015869
LinkDB
All DBs
Position
LG9:complement(25037967..25049878)
Genome browser
AA seq
724 aa
AA seq
DB search
MDRLGSKLLEKLKLTDSGSVKFASSKKKNELVNNTNNNSNGNTSSGLPPTLSTATSSPST
PGQFSLTSPTSTEACRPVSGRGGNGLGERVSATQHLSPSTSSSAPQTADCEHQPYSLSTL
APLRRRSPQQRASCYLGEGVDIQMRRESGLGDCDPAGSKASLNQRRYSLELQQLVRRQQL
LSHPPLSHSSGPPPAYPTSSTSSGYGSAPRGGAMAELHYLPEPERHKRLSLQEALFYKRL
SAGGELWESTRPASLSHPPHRPSEMGGGVGGGFFFPPGPTLSPCSSFSLQESVLVSPRSS
FASSTASGGSPMGSRCSSNRTSGISLGYDTRYSAAPQLQFSSLHAGGSTSGQGYTVSGRA
GAHSGSGGWQDYLDGVSSPGGTGVQDSRHSYPPAVGSPAAACYRAGPEWWDERGAGTARG
EETGMGAGRERARYSDLPGTRYQEELTRLLLRDAALEGEGLHLGGLMLKEHAKALSKPVT
LVNTATAAGPIKAQEEPGTGREALSENRQEFFGTCVKCGKGVYGADNACQALDSLYHTRC
FTCVSCGRTLRNKDFYNVNGSVYCKEDYMFSGFQAAAEKCSVCGHLILEQILQAMGNSYH
PGCFRCVVCSKALDGVPFTVDHLSNIYCVSDYNRSTCRSILPLELLLPRRTFAPKCAACL
QPILPAEGSEEILRVMSMNNDYHFECYHCEECGKQLSDQQGSQCFPLDSHLLCHSCHMTR
VCAS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggaccgacttggaagtaagttattggagaagttgaaactgactgactcagggagtgtg
aaattcgccagttctaaaaagaaaaacgagttggtcaacaacaccaacaataacagcaat
gggaacaccagtagtggactaccaccaaccctgagcactgcaacctcctcaccatcaaca
cccggccagttctctctcacctctccaacctcaacggaggcatgcagaccggtcagtggc
agaggtgggaatggactgggagagagagtctccgctacccagcacctctccccctctaca
agctccagcgccccccaaactgctgactgcgaacatcaaccctactccctctcgactctc
gccccccttcggcggcggtcgccccagcagcgtgcctcctgctacctgggggagggcgtt
gacatccagatgaggcgtgagtcaggcctgggggactgtgacccggctgggtccaaagcc
tctctgaaccagcgacgctactctctggagctccagcagctggtccgacgccagcagctc
ctctcccaccctcctctgtcccactcctctggcccccctccggcataccccacctcctcc
acctcctcgggttacggctccgctccccgtggtggcgcaatggccgagctgcactacctc
cctgagccggagcgccacaaacgcctctccctccaggaggcgctgttctacaagcggctg
agcgccggaggggaactctgggagagcaccaggccggcctcgctctctcaccccccacac
cggccctctgagatggggggaggggtgggtggaggtttcttcttccccccaggcccgaca
ctgagcccctgctcgtccttcagtctccaagagtcggtgctggtcagtcccaggtccagc
tttgcctccagtactgccagcggtggaagccccatgggcagccgctgtagcagcaaccgc
accagcggaatcagcctgggctatgacacccgctactctgcggcaccgcagctgcagttc
tcctccctgcatgcagggggctccaccagtggacagggatacacagtctctggcagggcc
ggggcacactctgggtcaggaggctggcaggactacctggacggggtctcctcacctgga
ggaacaggggttcaggacagccggcattcatacccgcctgcggtgggtagcccggcagcg
gcctgttaccgggctgggcccgagtggtgggatgagaggggagcaggaacagcacgaggg
gaggagactggcatgggcgctggcagggaacgggcgcgctactcggacctcccggggacc
cgctaccaagaggaactgacgcgcctgttgctaagagatgcagcactggagggggagggg
ctacacctgggtggtctgatgctcaaagaacatgccaaggccctcagcaagccagtgact
ctcgtcaacacagctacggctgccggaccaatcaaagcccaggaggagccaggaacgggg
agggaggcgttgtctgagaatcgccaggagttctttggtacatgtgtgaagtgtgggaaa
ggtgtgtatggagcggataatgcttgccaggctctggacagcctctatcacacacgctgc
ttcacctgtgtgtcctgtggtcgcaccctgagaaacaaggacttttacaacgtcaatggc
tctgtgtactgtaaagaggattacatgttctcagggttccaggctgcagcagagaaatgc
agtgtgtgtggccaccttatcctggaacagatcctccaggcaatggggaactcttaccac
cccggttgtttccgctgtgtggtgtgttccaaagccctggacggagttcccttcaccgtc
gaccacctcagcaacatctactgtgtctcggactacaacaggtctacatgtcgttctatt
ctgccattggaactcttgttgccccgcagaacgtttgctcctaaatgtgctgcctgctta
caacccatcttacctgctgagggcagcgaggagatactccgggtgatgtctatgaacaac
gattatcactttgagtgctaccactgtgaggaatgtgggaagcagctctcggatcagcag
ggctcccagtgcttccctctggactctcatctcctctgccattcatgtcacatgacccgg
gtgtgcgcctcataa
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