Oncorhynchus kisutch (coho salmon): 109897025
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Entry
109897025 CDS
T09179
Name
(RefSeq) thyroid receptor-interacting protein 6-like isoform X2
KO
K12792
thyroid receptor-interacting protein 6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109897025
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Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
109897025
NCBI-ProteinID:
XP_020347107
Ensembl:
ENSOKIG00005015469
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Position
LG9:28232203..28244535
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AA seq
587 aa
AA seq
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MCSPNKQLNKHVITNPDMSGPTWPPPKTLGSPVRPVPRMSQSGPAVYRQLPMKVSSDTRP
KYVVHDQNRGGGGMATRYLATRSTAGPMPHHHQEDPGFHSKSNDHYYQPPPHRLKEDPSL
NPHMDRYQLMHHSNIDAEIDSLTCMLADLDSHPQNSAQLYDNVPYDKHISGDCYKPSAQP
GEPSQGRQSMGFSPHPQSQSQYPPASPYPSDPHQGLQYFPQPDYTDAQVSKRYPQPVPAP
YTTTSTPTGPRFSVQVKTAQPVTNSQTVRQAEQAYTPPPHRQHTLWPPSQNQTGPLGWYP
PQPDSQAQELHSEKGYKGSDAGSGGRATQCPVSNRGPETHQSGSGSAPSSAYQPSKGTAA
LRPEEELDQLTKELVYDMNHPPTEEYFGRCARCGDNVLGDGSGCIAMEQVFHVECFTCIT
CHTRLRGQPFYALDKQSYCESCYISTLERCSKCSKPILDRILRAMGKAYHPRCFNCVVCG
CCLDGVPFTVDATYQIHCIDDFHRKFAPRCSVCGQAIMPEPGQEETVRIVALDRSFHVNC
YVCEECGLLLSSEGEGRGCYPLDGHILCKGCSARRIQDLSAKISTDC
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagcccaaacaaacaactaaacaaacatgtcattacgaaccctgacatgtctggt
cctacctggccgcctccaaagactctgggtagcccagtgagaccggtacctcgaatgtcc
caatctggaccagccgtgtacagacagctgcccatgaaggtctcctcggacacccggccc
aagtatgtggtccatgaccagaacagaggaggaggcggaatggccactaggtacttggct
acaagatccacagctgggcccatgccgcaccaccaccaagaggacccagggtttcactct
aaatctaatgaccactactaccaaccacctccccaccggctcaaagaagacccatccttg
aaccctcacatggaccgctaccagctgatgcaccactccaacatcgatgcagagattgat
tcgctcacctgcatgctggccgatctggacagccatccacaaaacagcgcacagctgtac
gacaacgtgccttacgacaaacacatctcaggggactgctacaaaccctcagcccagcca
ggagaaccctctcagggcaggcagtccatgggattctcccctcacccccaatcccagtcc
cagtaccctcctgcatccccataccccagtgatccccaccagggtctccagtacttccct
cagccagactacactgacgcccaggtatccaaacgctacccccagcctgtccctgcaccc
tacactaccacctccactcctactggcccgaggttcagtgtccaggtcaaaacagcccag
cctgtcaccaactcccagactgttaggcaagccgaacaggcttacacccctcccccacac
cgccagcacacgttgtggcccccatcccagaatcagactggccccctgggctggtaccct
ccacaacccgattcccaagcccaggagctgcactctgagaagggttacaaggggagtgat
gcagggtctggagggagagctacccagtgccccgtgtccaatagaggcccagagactcac
caatcagggtcaggctcggcaccaagctccgcctatcagcccagtaaggggacagcagct
ctgaggccagaggaggagttggaccagctcactaaggagttggtgtatgacatgaatcat
ccccctacagaagaatactttggtcgctgtgcacgttgcggtgacaacgtccttggcgac
ggcagtggctgtatcgccatggagcaggtgttccacgtggagtgtttcacttgcatcacc
tgccacactcgtcttcgggggcaaccgttctacgccctggacaagcagagctactgcgag
agctgttacattagtaccctagagcgctgctccaagtgctccaagcccatcctggaccgt
atcctacgggccatgggcaaggcctaccacccgcgctgcttcaattgtgttgtgtgtggc
tgctgcctggacggtgtgcccttcaccgtggacgccacctaccagatccactgtatagac
gacttccacaggaagtttgccccacgctgctcagtgtgtggccaggccatcatgcccgag
cctggccaagaggagacggtcaggatagtggcgctggaccgcagcttccacgtcaactgc
tatgtgtgtgaggagtgtggtctgctcctgtcgtctgagggtgaggggcgaggctgttac
cccttggacggtcacatcctgtgtaagggctgcagcgcccggcgcatccaggacctctct
gctaaaatatccactgactgctaa
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