Oncorhynchus kisutch (coho salmon): 109897042
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Entry
109897042 CDS
T09179
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha-like isoform X1
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04371
Apelin signaling pathway
oki04910
Insulin signaling pathway
oki04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
109897042
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
109897042
04920 Adipocytokine signaling pathway
109897042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
oki03029
]
109897042
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
109897042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
109897042
NCBI-ProteinID:
XP_020347145
Ensembl:
ENSOKIG00005003470
LinkDB
All DBs
Position
LG9:complement(30936661..31003806)
Genome browser
AA seq
1265 aa
AA seq
DB search
MAWDRCNQDSVWRELECAALVGEDQPLCPDLPELDLSELDVSDLDADSFLGGLKWYSDQS
EIISSQYGNEASNLFEKIDEENEANLLAVLTETLDSIPVDEDGLPSFEALADGDVTNASD
QSCPSTPDGSPRTPEPEEPSLLKKLLLAPANSQLSYNQYIGDKAQNHAASNHRIRPPPAV
VKTEISWNSKPRGGCPQQSRLVRRPCTELLKYLTATDDILLQTKASEAKSAWGGGGKDKG
GLLGASSSSSSPSSTTSFSSLSSSSSSIASKKKSSSSSVVSQQQQQQPHHQRGESRAAGE
CSVAGVGAGKWRRCAHGAGGTEGQSEPAAAPAPVPQARRNDSAHARPKLERRPSSEEGRP
PGLQPAVDAGRLAAARFIRYMHSYSLPPRETGQTGSCGRCHKAGAATRAIECWGRHDRGG
AAPRHIAVTVKKREEEPGHPLLSQLLTSKQRPARYQAHLLPPTTTPQPCKSRSSRMSSGV
LERDQCPSQAIEVEEKEHRGTVNIDPCRWGLRQAKEPDSDPLLAEGLGLGSWVSQPDQGL
DLGLGLGWLEVGLVEQADCFGEDVRDDDAIGSPMALSWGLPSPFFPDSRNPDPTPSVTQQ
HLHMQAVCRHPEDQSLPLLAKPTTLPLPLTPESPNDHKGSPFENKTIERTLSVEISGTPG
LTPPTTPPHKVSQENPFKASIKTKLSSCSPSALACKRARLSEAKPCRPLAPTSAPGRKGP
EQTELYAQLSKASTALPTSVVAATTGGCKEERCCGNNKRSVQPRCYGDHDYCQSTATSTK
QDPAAGANTAANATVTMTTTMTTPLKPNPGVAEDRHVECKDSAMPPSSSSSSSTSPPPSS
SSLAKQQQQSSSPVGKEARGQDRTPITQDKPHPPQTPEGDQHSASRKQPLRDQDIRAELN
KHFGRPQQAIYSQGEKGEEVVVEEGRRGGGEMAGALQTTKESPAGYENYPKLPSSGSGST
GYVHPGLSPFHEELEGQGVEGHFLYPWEGIPLDLLFESCSPSCSLSSCSPSRGSVSPPSS
LLLSPRHFHWPHSGSPSSRSHSRSRSRSSSSHHRRRSLSSSPDGRPSSRSRHNMDSSTLR
SRTHKSPHSQSRSPLSRRPRYDSYEEYQHECLKREEYRQDYQKREFERAEQRERQREKAI
EERRVVYVGRLRSDSTRTELKRRFEVFGEIEECAVNLRDDGDNFGFITYRYTCDAVAALE
NGHTLRRSNEPQFELCFGGQKQFCKSNYTDLDSHSDDFDPASTKSKYDSMDFDSLLKEAQ
CSLRR
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggacaggtgtaaccaagactcggtctggagagaattagagtgtgctgctttg
gttggcgaagaccaacctctctgcccggacctccccgaacttgacctctcagagcttgat
gtcagcgacctggatgcagatagcttcctgggcgggctcaagtggtacagtgaccaatca
gagataatttccagtcaatatggcaacgaggcttctaacttgtttgagaagatagatgag
gaaaatgaggccaacttgctggcagtgcttacagaaaccctggacagcatcccagtggac
gaggacggattgccttcgttcgaggccctggcagatggggacgtgaccaatgccagtgac
cagagctgtccctccacccctgacggctcgccgcgcacccccgaaccagaggaaccctcc
ctgctgaagaagctccttctggcgcccgcgaactcccagctcagctataatcaatacata
ggtgacaaggcacaaaaccatgcagccagcaaccaccggatcagaccaccacctgctgtt
gtcaagacggagatctcctggaacagcaagccgagggggggctgtccgcagcagagccgt
ctagtgaggcgcccgtgcaccgagctgctcaagtacttgaccgccaccgacgacatcctc
ctccagaccaaagccagcgaagccaagagcgcctgggggggcggcggcaaagacaagggc
ggcctgctgggcgcctcgtcctcctcctcctcaccgtcctccaccacttccttctcctcc
ctctcctcctcctcctcctcgatcgcctccaagaagaagtcgtcctcgtcgtctgtcgtg
tcacagcagcagcagcagcagccacatcaccagcgaggtgagagccgggctgctggcgag
tgtagtgtggctggtgtgggggctgggaagtggcgtcgctgcgctcatggggctggtggc
actgagggacagtccgaacccgcggcggcacccgctcctgtcccccaggcacgtaggaac
gacagcgcccatgcccgccccaaactggagcgcaggccgtccagtgaagaaggaaggccg
ccaggtctgcagcctgcggtggacgcggggcgcctggcagccgctaggttcattaggtac
atgcattcttattctctccctcctagagagacgggtcagacaggcagctgtgggcgttgc
cataaggcgggcgctgccactcgggcaattgagtgctggggcaggcatgaccgcggtggg
gcggcacctaggcacatcgcagtgaccgttaagaaaagagaggaggagccagggcatccg
ttgcttagccagctgctgacctccaagcagaggcccgcccgctatcaggcccacttgctc
ccgcccactactacccctcagccttgcaagagccgttcttcaagaatgagctctggagtc
ctggagagggatcagtgtcccagccaggctattgaggtggaggagaaggagcacagaggg
actgtcaatatcgatccctgcagatggggtctcagacaggccaaggagcctgattcggac
cccctgttggccgagggcttaggcctaggcagctgggttagccagccagaccaggggcta
gatttggggctggggctgggctggctagaggttggcctggtggagcaggctgactgtttc
ggggaggatgttcgcgatgatgatgccataggcagccccatggcgctctcatggggcctg
ccaagcccattcttcccagattctagaaatccagaccccactccctccgtcacacagcag
cacctacacatgcaggcagtctgcaggcaccccgaggaccagagcctcccgttgttagcc
aaaccaaccaccttgccacttcctttgaccccagagtctccaaatgaccacaagggatcc
ccgtttgagaacaaaaccattgaacgcacattgagtgtggagatctctggaaccccaggt
ttgacaccacctaccacgcccccccacaaagtcagtcaagagaaccctttcaaagcatcg
atcaaaaccaagttgtcttcatgctccccatctgccctggcgtgcaagagggctcggctg
agcgaggcaaaaccctgcaggcccctagccccaacctcggccccaggcaggaagggccca
gagcagactgagctgtacgcccagctaagcaaagcgtccactgccctccccacctctgtg
gttgctgcgacgacagggggctgcaaggaggagcggtgctgcggcaacaacaagcggagt
gtccagcctcgctgctacggtgaccacgactattgtcagtccacggcgaccagcacaaaa
caggaccctgccgccggcgctaacactgcggctaacgctaccgttaccatgacgactact
atgacaacccctctgaagcccaatccgggtgtggcggaggacaggcatgtggaatgtaag
gactcagccatgccaccctcctcctcctcttcatcctctacatctcctcctccatcttca
tcctctttggccaagcagcagcagcagagctcttcccctgtgggtaaggaggctcggggg
caggaccggacccccatcacccaggacaaaccacacccaccacagaccccagaaggggac
cagcactctgccagcaggaagcagcccctgcgagaccaggatatccgggcggagctcaac
aagcactttggccgcccccagcaagccatctatagccagggtgagaagggggaggaggtg
gtggtggaggaggggagacggggaggaggggagatggccggagccctgcagaccaccaaa
gagagccctgctgggtacgagaactaccccaagctccctagttctgggtctggttctact
gggtacgtgcacccgggcctctctcccttccacgaggagctggagggtcaaggcgtcgag
gggcacttcctctacccctgggagggcatccctttggacctgcttttcgagtcctgctcg
ccgtcctgctcgctgtccagctgctccccctcacggggctccgtctcgcccccctcctcc
ctcctcctctcccccagacacttccactggccccactcgggctccccctcctcccgctct
cactcccggtcccggtcccgcagttcctcctcccaccaccggaggcgctccctctccagc
tcacctgacggacgcccctcctccaggtctcgccacaacatggactccagcactttgcgg
tccaggacccacaaaagccctcactcacagtccagatcccccctcagtcgcaggccacgg
tacgacagctacgaggaataccagcacgagtgtctgaagcgggaggagtatcgccaggac
taccagaagagggagtttgagagggctgagcagagggagagacaaagggaaaaagcaata
gaggagagacgggtggtgtacgtggggagactgaggtccgacagcacgcggaccgagctg
aagcggcgctttgaagtcttcggcgagatcgaagagtgtgccgtgaacctgagagatgac
ggggacaattttggcttcatcacctaccgctacacttgtgacgccgtcgctgcccttgaa
aacggacacaccttgcgccggtcaaacgagccccagttcgagctgtgcttcggtggacaa
aagcagttctgcaaatcgaattatacagacttggactcccattctgacgactttgatcca
gcctccactaaaagcaagtacgactccatggatttcgacagcttgctgaaagaggcccag
tgcagcctgagaaggtaa
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