Oncorhynchus kisutch (coho salmon): 109897126
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Entry
109897126 CDS
T09179
Name
(RefSeq) uncharacterized protein LOC109897126 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109897126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109897126
Membrane trafficking [BR:
oki04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
109897126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
TbpB_B_D
Motif
Other DBs
NCBI-GeneID:
109897126
NCBI-ProteinID:
XP_031685259
Ensembl:
ENSOKIG00005003673
LinkDB
All DBs
Position
LG7:complement(56152198..56245904)
Genome browser
AA seq
1083 aa
AA seq
DB search
MSSLNIDYDEDQRWVPTHVQVTVLRGRGLRAKGKHGTSDVYTIIQVGKEKYSTCVLEKTT
VPEWKEECSFELLPGVLEQVGDGGAYPPGSSDLVLTVMHRALMGLDVFLGQAVIPLDKVF
QDRICMKNEWYKLNSKTGKKEKERGDIQVTVQFTKNNLTASMYDLSLGKDKPRSTFGKIK
DRIKGKKRSSKDSDEDSASTIGGGYGPVSRMRNRLPSDGGGEEDYEDDEGGEGRRSKMRN
FFLRGKLRKSSDTRSSTSLGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNFTADS
PDHTAESSPKLASYTCEFTDESGEINIPVPQPVCINGSHVYNTTLDPCPGNPVVPLDPLA
LVKKNLPLSQSLQNLNQRREELPVLLPKGPAADGRRWSFDKAGKEEKVAIAAALEQAGQG
MGEGAREESDRDSRSRNCLDESEQASNSDSGPGEKHKGWFGSKDNHNKPSPVVSPSSGSH
LTPHTPGLTPLTPGLLSWGPPHLPVDPNSLGTPLHHTNPFSQSPMSPSNPFLSLLQCNPF
YEELLADQTLNLNSAQPHLPPCCSSFTSYFSVAPQTWSTNPNPVPILPPTHDSPVTPDCT
NTGMKEQRASLKLPPEEKSANTKDKEEEETVKTSQRPLPPLPKTDTVPSANSPLCEEDMS
YAKAETASFYSATGPDNMAALDLMGEFSDDRCWATCDDVIRSDTIDRATSHLGATCVVKE
KTTSPEARIDWPNGMDLESYNSAELSNALLHSVRSQAHSPLKTVQSTTGTSSGEKVDEDI
EDYRLEDQYSEHPRVESVVVQHSLSEEHPLQRSLSEEHPRVESVVVQHSLSEEHPLQHSL
SEEHPLQRSLSEEHPRVESVVVQHSLSEEHPLQHSLSEEHTLQRSLSEGTRRNSVEDLTL
SFGSDPGVVTLGSLSFVQQHDTSDLLAASSFSAPSSLTAERNTYSSPALSSLPAPPPATV
RSSVSTVSAATLFSTAQPVIGASHAGMPQETHPPANQQISPHPVKPLTPEEKRRAELSEG
RSVLDKLKSSIHPGRSSQPTEQQPEKKKSLTEGAGPYYHLTHSELVALLLQREGDLHPAE
GGV
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctaaatatagactacgacgaagaccagagatgggttcctacacacgtccag
gtcaccgttctgcggggcaggggcttgcgggcgaagggcaaacacggtaccagcgacgtc
tacaccattatccaggtgggcaaggagaaatactccacttgtgttctggaaaagaccact
gttcccgaatggaaggaggaatgttctttcgagttgttaccgggtgttctggagcaggtt
ggggacgggggcgcatacccccccgggagcagcgacttggtcctgacggtgatgcaccgg
gcgctcatgggactggacgtgtttctgggccaagccgtgatccctctggataaggtgttt
caggacagaatatgcatgaaaaacgagtggtacaagctgaactccaagactgggaagaag
gagaaggagcgaggggacattcaggtgacggtgcagttcaccaagaacaacctgacagcc
agcatgtacgacctctccctgggtaaggacaagccccggtccaccttcggcaagatcaag
gaccgcatcaagggcaagaagaggagcagcaaggactctgatgaagactccgcctccact
attgggggcggctacggccccgtttcccgcatgaggaaccggttgccgagcgatggcggc
ggggaggaagactacgaggacgatgaagggggggaggggcggaggagtaagatgaggaac
ttcttcctgcgagggaaactgaggaagtcgtccgatacgaggtcgagcacgtcgctaggg
tcggagagtagtgagtcgtcgtcgaggggagggagtctcagtcccaccgctgggatctct
gtagtggtgtctgacctgtctaactcgcctagcaacagcagcaacttcacagcagacagc
cctgatcatacggcagagtcgtctcccaagctggcctcctatacatgtgagttcactgac
gagtctggagagatcaacatccctgtgcctcagcctgtctgcatcaatggaagccatgtg
tacaacaccaccttggacccttgcccggggaaccctgtagtacccttagatcctctagcc
ctggtgaagaagaacctgcctctgtcccaatccctccagaacctcaaccagcggagagag
gagctccctgtcctcctccctaaaggtcccgctgcggatggccggcgctggtcctttgac
aaggcagggaaggaggagaaggtggccatcgcagcggccctggagcaggctggccaaggg
atgggcgagggggccagggaggagtcagacagagacagccggagcaggaactgtctggat
gagtctgaacaggcctcgaactctgactctggcccaggcgagaaacacaaaggatggttt
ggatcaaaggacaaccataacaaacccagcccggtggtgtcacctagctcaggctctcac
ctcaccccacatacccctggtctcaccccccttacccctggtctgctgtcctggggcccc
cctcacctccctgtagatcctaactcactgggcaccccactccatcacactaaccccttc
agccagtcccccatgtctccctccaacccgttcctctctctcctccagtgtaaccctttc
tacgaggagctcctagctgaccaaactctaaaccttaactctgcccagccccatctgcct
ccctgttgttctagctttacctcctatttctcagtagcaccccaaacctggtctaccaac
cctaaccccgtacccatcctgcccccaacccatgacagcccagtcacaccagactgcact
aacactggtatgaaggaacaaagagcctccctgaaacttcctccagaagagaagagcgcc
aacactaaggataaagaagaagaagaaacagtcaaaacgagccagagaccgctccctccg
cttccaaagactgacacggtgccctctgctaactctcccctctgtgaggaagacatgtcc
tatgctaaggctgagactgcatcattctactctgccactggcccagacaacatggctgct
ttagacttgatgggggagttctctgacgatcgatgctgggccacttgtgatgatgtcatc
cggtcagacacaatagatcgagccacatcccatctgggagccacctgtgttgttaaagag
aagaccacatcccctgaagcaaggatagactggccaaacggcatggacttagaatcatat
aactcagcagaactttccaatgcacttctacactctgtcaggtctcaagctcacagtcca
ctaaaaacagttcagtccactactgggacatctagtggtgagaaggtcgatgaagacatt
gaggattacagattagaggaccaatactcagaacaccctcgtgtggagtctgttgtagtg
caacattctctctcagaagaacaccctctccaacggtccctctcagaagaacaccctcgt
gtggagtctgttgtagtgcaacattctctctcagaagaacaccctctccaacattctctc
tcagaagaacaccctctccaacggtccctctcagaagaacaccctcgtgtggagtctgtt
gtagtgcaacattctctctcagaagaacaccctctccaacattctctctcagaagaacac
actctccaacggtccctctcagagggcacaaggaggaacagcgttgaggacctgactctg
tcgttcggcagcgaccctggcgttgtaaccctggggtctttgtcctttgtccagcagcat
gacacttctgacctcctcgctgcctcctccttctccgctccttcctctctaactgctgaa
cgtaacacatattcctctccagctctctcctctctccctgccccgccccctgctactgtg
aggtcatcagtaagcactgtctcggccgcaacccttttctccactgcacagccagtgatt
ggtgcatcgcatgctggcatgccccaggagacacatccgccagccaatcagcagatcagt
cctcacccagtgaagcccctgaccccagaggagaagaggcgggcggaactttctgagggg
cggtcggtgctggacaaactcaagtcctctatccacccagggaggagcagccagcccacc
gagcagcagcctgagaagaaaaagtctctgacggagggagctgggccttactaccacctg
acccacagtgagctggtcgccctcctcctccaacgggaaggcgacctacacccggcagag
ggtggagtttga
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