KEGG   Oncorhynchus kisutch (coho salmon): 109897145
Entry
109897145         CDS       T09179                                 
Name
(RefSeq) period circadian protein homolog 1-like isoform X1
  KO
K21944  period circadian protein 1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oki03400]
    109897145
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    109897145
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 109897145
NCBI-ProteinID: XP_020347312
Ensembl: ENSOKIG00005027152
UniProt: A0A8C7MLW3
LinkDB
Position
LG9:39884759..39901402
AA seq 1372 aa
MSYDDSNSAPGDDTWGRVGSTNEEEEEAGTGLSSPGSNNNHGSQSGTSDLANRVRGSSPS
GSGSGGSSGGDQRGPSSDDGERESSEGGGGSRGHQSRSSHCSSSQKDSGMMLENTESNKS
SQSQSPSPPSSSLAYSLLSASSEQDPPSTSGCSSNEQHQTARVQTQKEMLKALKELKVRL
PAECKGKGRSSTLDALQYALNCVKQVRANQEYYHQWGVEECHGCSLDLSVYTTEELDNIA
SEYTLKNTDTFSMAVSFLTGKVVYISPQGSSLLRCKPERLQGAIFSELLAPQDVSTFYSS
TAPCRLPAWATCMGSVSPLTDCTQGKSMFCRISADRAQGSEIKYYPFRMTPYQLTLRDLD
TSDPQPCCLLIAERVQSGYEAPRIPADKRIFSTSHTPSCLFQEVDERAVPLLGYLPQDLV
GSPVLLYLHPEDRPLMVAIHRKILQSAGQPFDSSPMRMCARSGEYVTIDTSWSSFINPWS
RKVAFIVGRHKVRTSPLNEDVFTPLRGCEGRPVAPEIVQLSEQIHRLLVKPVHSGGSQGY
SSLTSNGSCSHEQQYRRTASSASDSKSTNAMEAMEAAVVALHKPMTFQQICKDVYMVKTS
GQQVFINSHNRALSRRHAVTALRATGEVEPIKSLIPEVVCPSKTPVFNAQQLMKEEPPSA
YSYQQINCLDSIIRFLDGCNVKRKFGSSSATSTSDEEKQQETAGNEKGGPATSVTLVGDS
AGVPPLAMHSHKAKSVASVTSQCSFSSTIVHVGDKKPPESDVVMGNAPPTPMPATPTTTR
SPPTAIINPPPPKTTSPPSRRGGGLTKEVLSAHTQQEEQAFLCRFSDLSQLRVIAPSSAL
RCPLPNTNPRRRRACSPDYPAAGGSSGRRGAKRLKQQESSEQRGPLALGLTGPLRSPNVV
PMNSPPSSTYTLPMMPLGPPTTSSWPVSVGSQASLPSVPYPSGTLPLYPIYPPLSQPIQN
QMVPPMMALVLPNYMFPQLHPNLPQMTTAINTMGSPMSQPGAAMVTPGPQQFFNPGAGFP
FPGTNVMPCPMPTMPSLMQTAMPIQTQRPASGSSTPQSCSQVPVDQEGAESPLFHSRCSS
PLNLLQLVEESPSNRLEVATALAASAQQATIPSQGTRGRSPDDSKENANDSNQDGESTPS
DLLDLLLQGDSRSGTGSAASGSASSGSGSDSLGTVSNGCSSSGSGTSRSRSSRTSKYFGS
IDSSENDHSRKQPTGGSRAGGDGEEKLIKCVLQDPIWLLMANTDHKVMMTYQLPTKDRET
VLRQDREALRATHKHQPRFTEDQKRELSQVHPWIRTGRLPRAINVSACMGCKSSPLPEST
VEQGGEARREEEGHAAHSETQGNDQEMTTEEQEVTWPTGEKKARAGETYMTH
NT seq 4119 nt   +upstreamnt  +downstreamnt
atgagttacgacgactcaaactccgcccctggcgatgacacttgggggcgagtgggaagc
accaatgaagaagaggaggaggcgggaacaggattgagctcccccggcagcaacaacaac
cacggcagccaatcgggaacttcggacttggccaatcgggtgcgaggatcctctccaagt
ggatccggctccggtggctcgtctgggggggaccagaggggtcccagctcagatgatggg
gaaagggagtcgagtgagggaggaggcgggtccaggggacaccagtccagaagttcccac
tgttcctccagccagaaggactcgggcatgatgctggagaacacagagagcaacaagagc
tctcagtcccagagcccgtctccccccagcagttctctggcctacagcctgctgtcagcc
agctcagagcaggaccctccttccacttccggctgcagcagcaacgagcagcaccagacg
gcccgcgtccagacccagaaggagatgctgaaagccctgaaggagctcaaggttcgcctg
ccggccgagtgcaagggcaaaggtcgctccagcaccctggacgccctccagtacgccctg
aactgtgtgaagcaggtgcgagccaaccaggagtactaccaccagtggggtgtggaggag
tgtcacggctgcagcctggatctgtctgtatataccacagaggagctggacaacatcgcc
tcagagtacaccctcaaaaatacagacaccttttccatggcggtatccttcctgacaggc
aaagtggtgtacatctccccccagggctcgtccctgctgcgctgcaagccagagaggctc
caaggggccatcttctccgaactgctggctccccaagatgtcagcaccttctacagcagc
actgccccctgccgcctgcccgcctgggccacctgcatgggctctgtgtccccactgaca
gactgcacccaggggaagtccatgttctgtcgcatcagtgccgaccgggcgcagggaagc
gagatcaaatactaccccttccgcatgaccccctatcagctaaccctgagggacttagac
acatcagatccccagccctgctgcctgctcatcgctgagcgggtacagtccggatacgaa
gctcccaggatccctgctgacaagcggatcttttccaccagtcacacgccgagctgtctc
ttccaggaagtagatgaaagggctgtgccgttgttgggctaccttccccaggacctggtg
ggaagccctgtactcctctacctccacccagaggacagaccgctcatggtggccatacat
aggaagatcctccagtctgcaggccagccctttgacagttctcccatgaggatgtgtgcc
cgcagtggggagtacgtgaccatcgacactagctggtcctccttcatcaacccctggagc
aggaaggtggccttcatcgtgggccgccacaaagtccgaaccagccccttgaacgaggac
gtgttcacccctctgcggggctgtgagggccgccccgtggccccagagatcgtgcagctg
agcgagcagatccaccgtctcctggtgaagccggtccacagtggagggtcgcagggctac
agcagcctgacctcaaatggatcctgctcccacgagcagcagtaccgacgcacggcctcc
tccgcctccgacagcaagtccaccaacgccatggaggccatggaggcagccgtggtcgcg
ctgcacaaaccgatgacgttccagcagatctgtaaggacgtgtacatggtcaagaccagt
gggcagcaggtctttatcaactctcacaaccgagccctgtcccggcgacacgctgtcaca
gcgctccgggccaccggagaggtggagcccatcaagagtctgatcccggaggtggtgtgt
ccatccaaaaccccggtgttcaacgcccagcagctgatgaaggaggagcctcccagtgcc
tacagctaccaacagattaactgtctggacagcatcattaggttcttggacggctgtaac
gttaagaggaagtttggctcgtcctctgccacgtccacatcggacgaagagaaacaacag
gaaaccgctgggaatgaaaaaggtggtccagctacctcagtcactctggttggggactca
gcgggggtaccccccctggccatgcacagccacaaggcgaagagtgtagcctcagtcacc
tctcagtgcagcttcagcagtaccatcgtccacgtgggagacaagaagccccccgagtca
gacgttgtcatgggaaatgctcctcccactccaatgccagccactcccactacgaccagg
tctccaccgaccgccatcattaaccctccaccgcccaaaacaacctctccacccagccgg
agaggaggtggcctgaccaaggaggtgctctctgctcacacgcagcaggaggagcaagcc
ttcctctgtcgcttcagtgacctgagccagctgagggtgattgctccatcctcggccctg
cgttgcccgctccccaacaccaacccccgccgcagaagagcgtgttcccctgactaccct
gcagctggaggcagcagtggtcgccgtggagccaagaggctgaagcagcaggagtcctca
gaacagaggggccctctggctttaggcctgaccggacccctccggagccccaacgtcgtc
cccatgaattccccccccagctccacctacaccctcccaatgatgcccctggggcctccc
accacatcctcctggcccgtctccgtaggatcccaggccagcctgccctctgtgccctac
ccctcgggtacactccccctgtaccccatctacccccctctctcccagcccatacagaac
cagatggtgcctcctatgatggccctggtgctgcccaactacatgttcccacagcttcac
cccaacctcccccagatgaccacagccataaacacaatgggaagtcccatgtcccagccg
ggagccgccatggttacccccggcccacagcaattcttcaaccccggcgctggtttcccc
ttccccgggaccaacgtcatgccatgccccatgcctacgatgccctcgctcatgcaaact
gccatgcctatccagacccaacggccagcctctgggtccagcacccctcagtcatgtagt
caagtaccagtcgaccaggagggtgcagagtcgcccctcttccactctcgctgctcctcc
ccactcaacctgctgcagcttgtggaggagtcgcctagcaaccggctggaggtcgccacg
gctctggctgcttccgcgcaacaggccacgatcccctcacaagggactcgggggagatcg
ccagatgactccaaggagaacgccaatgattccaaccaggatggtgaatccacccccagt
gacctactggacctgctcctgcaaggggactcccgctcaggcaccggctcagctgcctca
ggctccgcgtcctctgggtcgggttctgactccttgggcactgtgtccaacggctgcagc
tcctcaggcagtggaactagtcgcagtcggagtagccgcaccagcaagtactttggcagc
atcgactcgtcagagaacgaccactcccgcaagcagccaacaggtggcagcagagcagga
ggagacggggaggagaagttgattaagtgtgtcctgcaggatcccatctggctcctcatg
gccaacaccgaccacaaggtgatgatgacgtaccagctgccgaccaaggacagggagacg
gtgctgcggcaggaccgcgaggccctaagggccacgcacaaacaccagccccgcttcact
gaggaccagaagagagaactgagccaggtccacccctggatacgtaccgggcgcctgccc
cgtgccatcaacgtctcggcatgtatggggtgcaagtcttcccccttaccggagagcacc
gtggaacagggaggagaggctcgcagagaagaggagggacatgcggcgcactctgaaaca
caaggcaacgaccaggaaatgacaacagaggagcaggaagtgacctggccaacgggggag
aagaaagcaagggctggtgaaacctacatgacccactga

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