Oncorhynchus kisutch (coho salmon): 109897190
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Entry
109897190 CDS
T09179
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109897190 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109897190 (usp24)
Enzymes [BR:
oki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109897190 (usp24)
Peptidases and inhibitors [BR:
oki01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109897190 (usp24)
Ubiquitin system [BR:
oki04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109897190 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
ubiquitin
Motif
Other DBs
NCBI-GeneID:
109897190
NCBI-ProteinID:
XP_031689302
Ensembl:
ENSOKIG00005019372
LinkDB
All DBs
Position
LG10:28438246..28487998
Genome browser
AA seq
2619 aa
AA seq
DB search
METEEEQHMTTLLCMGFPDAVAIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGPSGDGESSGRTGTGGFDPPPAYHDVVESERSNDENGNCSGSSMEFPTTNLYELENRVF
TDHWSIPYKREESLGKCLIAATCLAKHGLADADENCKQFMDRCMHEAFKKLLTSSAVHKW
GTEIHEGIYNMLMLLVELVAERVKRDPIPVGVMGVLTIAFNPDNEYHFKNRMKTCQRNWS
EVFGEEAMFAVSPSNSYQKEPHGWLVDLVNRFGEMGGFTAIQAKLNTQEIEIGCVSALVQ
PLSVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPELLSAIKLLCMRFQ
TTLVTVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTMSKTVKNAIDTDRLLDWL
VENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSKIWMIQAGQSSTVIENIHTI
MAAAAVKFNLDQLSHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLEVLW
ELAHLPTLPTSLVQQASEEHLAILTDAYAVKETVKRCYIIKCIEDIKKTQTEEEGKTSDI
QSSFLTGSWGKKKAKENSLAKSSQQGSPQAVWVVPALRQLHEITRSFIKQTYQKQDKQSI
IQDLKKNFEIVKLITGSLVVCHRLAVSAAGSNGLAGHTLVDGRYTYQEYLDGHLRFLAFF
LQEASLYLVWNRAKELWDCLVSGPEVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILK
LEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLSGMDFIWRIAMETPDEEI
ANEAIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATK
MLTATAMPTVATSVQSPSRSTKLVIIERLLLLAERYVITIEDLYSVPRTILPHGASFNGH
PVSLHVTYESTKDTFTLEAHSNETVGSIRWKIAEHLSCPVDNVQIFANDSVLTMNRDQKL
LSQLGFSDEQSLTVKSSGTGTPSGGSSESSASASSSSSAVFNSAYAMEQEKSLPGVVMAL
VCNVFEMLYQLANLDEPRTTLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQKTLFTL
GQGSGSRSPSLGSKQQHQPSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMPTSDDEM
AKTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQSMP
SLLDDDVIREGDTLSSRPFRNAGRPGRQLSLCGTPEKSSYRQMSLSERSSIRVEEIIPAA
RVAIQTMEVGDFTSTLACFMRLTWAAAAGRLDLVGSPQPIRPEHSSLLPLGVRTRVSSTG
SNCSSSSEGEAPPTALHAGICVKQQSVSIKDCIIAREALSLLVTCLQLRTQQLGSFYILP
CVSDFIIDILLGSASGEIRRVACDQLYTLSQSDSSAFPEIVKPNVFLLRVVLASQLPLWS
PTSVMRGVNQRLLSQCTEYFDLRCQLLDDLTSSEMEVLSVSAVAMLEDEISWLDNFEPSW
SSEMETSEADNILQAGHLRLIKTLLSLCGTEKEQLGHSLIQQLLDDFLFRASRIILNTSN
PASSSPPSHDFFPKCSTASSRLAAYEVLVMLADSSVANLQLITRELLSMHHQSDPSLSKE
FDFLPPVDSRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLAEAFLSIEDDTEQPDESVFC
QVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLDEHLKKIG
REQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVRGEVLEG
TNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYDEQIRFPWVLNME
PYTVSGMARQDGGAEGGEGRGEAGGSPRKKVTISENYELVGVVVHSGQAHAGHYYSFIKD
RRGSARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRRRYWNAYML
FYQRISDQNSPVLPKKSRVSVMRQEAEDLTLSAPSSPDVSPQSSPRPARANNDRLSVLTR
LVRKGEKKGLFVEKMPARIYQMVRDENLKFMKNRDVYNSDYFNFTLSLASVNATKLKHPA
YQAMARVSLQLAVHFLFHTYLHTKKKLRVDTEEWMTTVEVLLSKSSEACHWMAQYLVGPE
GREITKVCLLECGVREVRVVVAAILEKTLESALHFADSGLDSLTDALLSLLDKDVPENVK
NCNQYFSLFSNFAQRGSGPCHLLLKHSAYRRMLIFLLGPNRQNNQNRRWSPAQAREFLHL
HSTLALMTLHSDLNTQHTHDQGVCKLIVSSIPASSRLLPLNADIMASLFSPEGQPYLLEV
MFAVRELSGPLTVLIEMVTYCSFCNEPFSLGVLQLLKTQLETAPPHELKNVFQLLQELLV
VEDPLQTQRLKYAFESEKGLLALMHQSNNVDSSRCYQCVKFLVTLAQKCAPAKDYFKDLS
GHWSWAVQWLQKKMSEHYWTPQSNVSNETSTAKTFQRTISAQDTLAYATALLNEKEPSGS
SNGSDGSPANENADRSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7860 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaagaggaacaacatatgacaactctcctctgcatgggtttcccagatgca
gtggcgatacgcaaggcgctacgcctggcgaagaacgacatcaacgaggctgttgcgctc
ctgaccaacgaaagccccggtcttgggtatggatatgagccgatggagagtggccctgcc
ccaggcccgagtggagacggggagtccagtgggcggaccgggactggagggttcgaccca
cctcccgcataccacgatgtggtggagagcgagaggagtaatgatgagaatgggaattgt
tcaggcagcagtatggagttccccaccactaacctgtatgaactggagaacagagtgttc
actgaccactggtcaatcccctacaagagagaggagtcactgggcaaatgtctgatcgca
gccacctgccttgccaaacacggtctggcggatgcggatgaaaactgtaaacagtttatg
gacaggtgtatgcacgaggcctttaaaaagctcctgaccagtagtgcggtccataagtgg
gggacagagatccatgaggggatctacaacatgttgatgttactggtggagctggtggct
gagagagtgaaacgggaccccataccagttggcgtgatgggtgtactgactattgccttc
aacccagacaatgagtaccactttaagaaccgtatgaagacgtgtcagaggaactggagc
gaggtgtttggagaggaagccatgtttgctgtgtcacctagcaacagctaccaaaaggag
cctcatggctggctggtagatttggtcaatcggtttggagagatgggagggttcactgct
atccaggctaaactcaatacacaggagatagagattgggtgtgtgtctgctctggtccag
cctctatctgtgtgtgcagaatacctcaactccagcctggtgcagcccatgttggatcct
gttatccataagatgatcacctatgttcagaacctggaggagaaggacctgaaagacaag
aggctggtgagcatcccagaactgctgtcggccataaagctgctgtgtatgaggttccag
accaccctggtcactgtggtggatgacctgcgcctggacactctgctacgcatgctgaag
actcctcacttctctaccaagatgaactccctcaaagaggtgactaagctgattgaggag
agtactatgtctaagacggtgaagaatgccattgacacagacagactgctggactggctg
gtagaaaactctgtcctctcaatagcactggagggtaacatagaccaggcccagtattgt
gatcgaataaaaggcatcattgaattgctgggcagtaaactgtctctggacgagctctct
aagatctggatgatacaggcaggacagtcgtccacggtgattgagaacatccacaccatc
atggctgcggctgccgtcaagttcaacttagaccagctcagccacctgtttgtcctcata
cagaagagctgggaggtagagagtgaccgtgtgaggcagaagctgctcagtctgattggg
aggatcggtagagaggcccgctctgaggccaccacagggaaggtgctggaggtgctgtgg
gagttagcccacctgccaaccctgcccacctccctggtacagcaggcgtctgaggaacac
ctggccatccttactgacgcatacgctgtgaaggagactgtcaaacgctgctacatcatc
aaatgtatagaagacatcaagaagactcagactgaggaggagggtaaaaccagcgacatt
cagagctcgtttcttactggctcctggggcaagaagaaagccaaagagaactcattggcc
aaatcttcacagcagggcagcccccaagcggtctgggtggttccagctctgcggcagctc
catgagatcacacgttccttcatcaaacagacctaccagaaacaggacaagcagagcatc
atccaggacttgaagaagaactttgagatcgtcaaattgatcacaggatctttggtggtc
tgtcatcgactggctgtgtctgcagctgggagcaatggactggccggacacacactcgta
gatggacgatacacctaccaggagtatctagacggccacctgaggttcctggccttcttc
ctccaggaggccagcctctacctggtctggaacagagccaaagaactatgggattgcctg
gtctctggacccgaagtctgcgagctggacagagagatgtgttttgagtggttcactaag
ggccagcatgatctggagagtgatgttcagcagcagctcttcaaagagaagatcctcaaa
ttggagccctacgagattactatgaatggcttcaatctgttcaagaccttttttgagaac
gtcaacctgtgtgaccatcgcttgaaacgccaggggactcaactgtgtgtggagcggctg
gacctgtctgggatggactttatctggcgcatcgccatggaaacgcctgacgaagagatc
gctaacgaggccatccaactcatcatcacctacagctacaccaacctcaacccaaagatg
aaaaaggattctgtgtctttacacaagaagttcattgctgattgttacaaacgactggag
gcagccagttcagctctaggaggccccacgttgactcatgctgttaccagggcaaccaag
atgctgacggccaccgccatgccaactgttgctacgtcggtccaatcaccttccaggtcc
accaaactggttatcattgagaggctgctgctattggctgagcgttacgtcatcactatc
gaggatctgtactctgtgcctcgtaccattctacctcacggagcgtcgttcaacggccac
cctgtctctctacacgtcacctatgagtccaccaaagacaccttcaccctggaggcccac
agtaatgaaactgtaggcagcatccgatggaagatcgccgagcacctcagctgtccagtt
gacaatgtccaaatctttgccaatgacagcgtgttgactatgaaccgggaccagaagctg
ctgtcccagctggggttcagtgatgagcagtctctgacagtgaagagctctggcacaggg
acaccctcaggtggcagctctgaatcctccgcctccgcctcctcctccagctctgcggtc
ttcaactcagcctacgctatggaacaggagaagtcccttccaggtgttgtcatggcattg
gtgtgcaacgtgtttgagatgctctaccagctggccaacctggacgaaccccggacaacc
ctgcgtgtgcgtaagctgctgctgctgatcccaacagacccagaggttcaggatgctcta
gataactttgttcccaaagagtccagtgtatggagtcaccagaagacgctgttcaccctg
ggtcaggggtcaggctctcggtctccgtctctgggttctaagcagcagcaccagcccagt
gctgcctccatcttggaatcactcttcagatcctctgctcccgggatgtccaccttcaga
gtcctctacaacctggaggtgttgagttctaagttgatgccgacctcagatgatgagatg
gctaagaccagtgtcaagtctttctgtgagaacttcctgaaagctggaggtctcagtttg
gtggtgaacgtgatgcagcgagactctattccctctgaggtggactatgagaccagacag
ggagtctactccatctgcctacaactggccaggttccttttggttggccagagtatgccg
tcgttgctggatgatgatgtcatccgagagggcgacacgctgtctagtcggccgttccgt
aatgcggggcgaccggggaggcagctgtcgctgtgtggaacgccagagaagagctcctat
agacagatgtctctgtctgaacgctcctccatcagagtagaggaaatcatccctgctgca
cgcgtagctatacagacgatggaggtgggggacttcacctcgacgttggcgtgcttcatg
cgtctgacatgggcagcagccgctggccgattggacctcgtcggcagtccgcagccaatc
agacctgagcacagctcgctcctcccacttggggtccgcacccgtgtcagcagcactgga
agtaactgcagctccagcagtgagggtgaagcgccacccacagctctgcatgctgggata
tgcgtgaagcagcagagtgtttctattaaagactgcatcatcgctagagaggccctgtca
ctactggtcacctgtctacagctacgaacacagcagctaggctcattctacatcctcccc
tgtgtcagcgacttcatcatcgacatcctgctaggatcagccagtggagagatccggcgt
gtggcatgtgaccagctgtacactctgagccaatccgacagctctgcgttccctgagatc
gtcaaacccaacgtgttcctgctccgagtcgtcctcgcctcccagctgcctctctggagc
cccacgtctgtcatgagaggagtcaaccagaggttgctgtcacagtgtactgagtacttt
gacctgcgatgtcaactactggatgacttgaccagttcggagatggaggtgttgtcagtg
agtgcggtggccatgttggaagatgaaatcagctggttggataactttgagcccagctgg
agctctgagatggagaccagtgaggctgacaacatcctgcaggctggacacctccgcctc
atcaaaacactactgtcactctgtggcacagagaaggaacaactgggtcactctctgatc
cagcagctgttagatgacttcctcttccgagcatcgcgcatcatcctgaacacgtctaac
cccgcctccagctccccccccagccacgacttcttccccaagtgcagtacggccagcagc
agactggcagcctacgaggtgctggtgatgctagcagacagctctgtggccaacctacag
ctcatcaccagagagctgctgtccatgcaccaccagtcagacccttcgctcagcaaggag
tttgacttcctcccgccggtggacagtcgctctgtgtcggggttcgtagggttaaagaac
ggtggagccacctgctatatgaatgctgtgttccagcagctgtacatgcagcctggcctg
gctgaggcctttctgtctatagaggacgacacggagcagccagacgagagtgttttctgt
caggtccagtctctgttcggacacctgatggagagcaagctgcagtactacgtccctgag
aacttctggaagatctttaagatgtggaataaggagctgtatgtacgagagcaacaggat
gcctatgagttcttcacttcactggtggaccagttggacgagcaccttaagaaaatcggc
cgtgagcagatctttaagaacactttccagggaatcttctctgatcagaagatctgcaaa
gactgtcctcaccgatatgagcgagaggagacgtttatggcgctgaacctaggtgtgact
tcgtgtcagagtcttgagatctcactggaccagttcgtcaggggggaggtgctggaagga
accaacgcctactattgcgagaagtgcaaggagaagcgtaccacagtgaagcggacctgc
ataaagtccctgcccagtgttctctgtatccatctgatgcgcttcggattcgactgggag
agcggacgctccatcaaatacgacgagcagatcaggtttccctgggtgctgaacatggag
ccctacacagtgtctggcatggctcgtcaggatgggggggcggaggggggagagggccgg
ggggaggcaggtggctcacccaggaagaaggtcactatctctgagaactacgagctggta
ggagtcgtagtccacagcggacaggcacacgctggacattactactccttcataaaggac
cgacggggaagtgctagaggaaggtggtataagtttaatgacaatgtggtcgaggagttt
gacatgaacgacgagacactggaatatgagtgctttggaggagagtaccggcctaaagtc
tatgatcagtctaacccctacccggatgtgcggcggcggtattggaacgcctacatgttg
ttctaccagaggatcagtgaccagaactctcctgttctccctaagaagagcagagtcagc
gtcatgaggcaagaggcagaagacctcacgctttcggcgccctctagcccagacgtcagt
ccccagtcgtcccctcgccctgccagggccaacaatgaccgtctctctgtcctgacccgt
ctcgtacggaagggagagaagaaaggactgtttgtggagaaaatgcctgctaggatctac
cagatggtgagagatgagaacctgaagtttatgaagaacagagatgtgtacaacagcgac
tacttcaacttcactctgtcactggcctccgtcaacgcgacaaagctgaagcacccagcc
tatcaggccatggccagagtcagtctccagctagcagtccacttcctgttccacacctac
ctccacaccaagaagaagctgcgggtggacacagaggagtggatgactacggtggaggtg
ctgctgtctaaaagcagtgaagcctgtcactggatggctcagtacctggtgggacctgag
ggacgagagatcaccaaagtgtgtctgttggagtgtggggtgagggaggtgagggtcgta
gtggcagccatcttagagaagaccttagagagtgcgctccacttcgctgactctggattg
gacagcctgaccgacgcgctcctctccctattggacaaagacgttcctgagaacgtcaaa
aactgcaaccaatacttcagcctcttcagcaactttgctcagagaggctctggtccgtgc
catttgttgttgaaacactcagcgtatcgtaggatgctcatctttctcctcggacccaac
agacagaacaaccagaatcggaggtggagtccagcccaggccagagagttcctgcacctc
cactccactctggccctgatgactctccactcagacctcaacacacagcacacacatgat
caaggtgtgtgtaagctgattgtgagcagtatccctgcctcctcccgccttctccccctc
aacgctgacatcatggcctcgctcttcagccccgagggacagccttacctgctagaggtg
atgtttgcggtgcgggagttgtcaggccctctgactgtgctgatagagatggtgacgtac
tgctccttctgtaacgaacccttctccctcggagtactacagctgctcaagacccagttg
gagaccgctccaccccatgagttgaagaacgtgttccagctgctgcaagagctgctggtg
gtagaggaccctctccagacccagagactgaagtacgcctttgagtcagagaaaggcctg
ctagcgttgatgcaccagagtaacaacgtggacagcagccgctgctaccagtgtgtcaag
ttcctggttaccctggcacagaagtgtgctcctgctaaggactattttaaagatctgtct
ggtcactggagctgggcagtgcagtggctgcagaaaaagatgtcagaacactactggact
cctcagagcaacgtgtccaatgagacgtccacagccaaaacgttccagcgcaccatctca
gcccaggacacgctggcctacgccacagcgctgctcaacgagaaggagccatctggcagc
agcaacggctctgacggcagcccagccaacgagaacgcagaccgcagcctccgacagggt
tccgagtctcccatgatgctcggtgattcaaagagtgatctggaggatgtcgatccttag
DBGET
integrated database retrieval system
