Oncorhynchus kisutch (coho salmon): 109897220
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Entry
109897220 CDS
T09179
Name
(RefSeq) VWFA and cache domain-containing protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCache_1
VWA_N
DUF6744
DUF3685
Motif
Other DBs
NCBI-GeneID:
109897220
NCBI-ProteinID:
XP_031689523
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Position
LG10:complement(39552274..39651702)
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AA seq
1293 aa
AA seq
DB search
MARRVGGEGSVILTRIPSTVWNKSSRLHWCNFMAVFWSSVAVLSLLCCGFCGAETEFSIL
EEAQVLAVQMKKLSSQELGVFTMQRIFNSFVYTEKTSNGETEVQQLAKKIREKFNRYLDV
VNRNKQVVEASYTAHLTSPLTAIQDCCTIPPSMMEFDGNFNTNVSKTICCDRLSPTVNSR
AFNPGRDLNSVLADNLKSNPGIKWQYFSSEEGIFTVFPAHKFHCKGNYEHRCRPVYVSAV
RPQSKHIVVIIDHGVTITDTQLQIARDAALVVLSSVDEHDKVSILSSAEAVRSCSLDPCY
KSYLSPATSETKRKMSTFVNNLKASDSPTLHALGFQKAFQLLRNTSNITRQLTNTDMVII
YLSSGITSRDASEHEKRDTLRVVKEENRHLNNSVMILTYALMNEGVTGLKELAFLRDLAE
QNSLKYGVPDRSALPVVKGSMMVLNQLSNLETTVGRFYINLPNRMIDLARFSLSYQDAMG
DGFIMTASRPCYFGNLLLGVVGVDVNLAYILEDVTYHQDSLASYTFLIDNKGYTLMHPSL
TRPYLMTEPPLHTDIIHYENIPGFPVVRDNILRLPLGSQVIAVPTNSSLSWHTNRLRDPS
REAYNVSYAWKLVQDTSFILCIVYVQPEIPVKHLKNLNTAPSSKLLYHRLDLLGQPSSCL
HFKQLATVESPTVMLSAGSFSSPYDHLSQPETKRMVEHYTAYLSDNTRLIANPGLKSSVR
NEVMATSHVTDEWMTLMEMSSLNCYIVRRYIATPNGVLRIYPGSLMDKAFDPTRRQWYQH
AVANPGLITFTGPYLDVGGAGYVVTISHTIHASSSQMAPGYAVAVMGIDFTLRYLYKVLL
DLLPICNQDKGNKIRCFIMEDRGYLVAHPTLIDPKGHAPAEQQHITHKEPLVANDILNHP
NFVKKNLCNSFSDRTVQRFYKFNSSIIGDLTNLVHGSHCSKYRLTRIPGTNAFAGIVNET
CDSLAFCACSTVDRLCLNCHRMEQNECECPCECPLEVNECTGNLSYAENRNPSCEVHQEP
LSLTVMDSSLQDTLPQCINTRCSQRFTSSDCFGVLDCEWCMVDSDGKTHLDKPYCALQKE
CFGGIVGAKSPYMDGMGMLDEEVVSLNMMKSAPVGPVAGGIMGCIMVLVLAVYAYRHQIH
RRSHQHMSPLAAQEMSVRMSNLDNERDERDEDSHEDRGIISNTRFIAAVIERHTHSPERR
RRYWGRSGTESDHGYSTMSPQEDSENPPCNNDPLSAGVDVGNHDDDLDLDTPPQTAALLS
HKFHPYRHPPYHHPLHTHRLQAAVTVHSVDAEC
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggcgagtagggggagaaggatccgtgattttaacacgaattccatccacggtt
tggaataagagctcgagactccactggtgtaacttcatggctgttttttggagctctgtg
gcagtattgtcgcttctatgttgtggattttgtggcgctgaaacggagttttcgatcttg
gaggaggcacaagttttagccgtacaaatgaaaaaactgtcctcgcaggagcttggagtc
ttcaccatgcagagaatcttcaactcgtttgtgtacacagagaagacctcaaacggagag
acggaagtacagcagcttgcgaagaagatccgcgagaagtttaaccgttacctggacgtg
gtgaacaggaacaagcaggtggtggaggcatcctacacggcccacctgacctcccccctc
accgccatccaggactgctgcaccatcccgccctccatgatggagttcgacggtaacttc
aacaccaacgtgtccaagaccatctgctgtgaccggctgtcccccaccgtcaacagtcga
gcctttaaccctggacgggacctcaactcagtgttggcagataacctgaagtccaacccg
ggcatcaaatggcagtacttcagctcagaggagggcatcttcactgtgttccccgcccac
aagttccactgcaagggcaactacgagcaccgctgcaggccagtgtacgtgtcggcggtg
cggccccaatcgaaacacatcgtggtgatcatcgatcacggcgtgaccattacagacaca
cagctgcagatcgccagagacgctgcgctcgtcgtcctcagctccgtagacgaacatgac
aaggtctcgatcctgtcctcagcggaggcggtgcggtcctgttcactggacccgtgctat
aagagctacctgtctcctgccaccagcgagaccaagaggaagatgagcaccttcgtcaac
aacctcaaggcttccgacagtcctaccctgcacgcactgggcttccaaaaggccttccag
ctgctccggaacaccagcaatatcacccgccaactcaccaatacggacatggtgatcatc
tacctgtcgtctggcatcacgtcccgagacgcgtcggagcacgagaagagggacaccctg
cgcgtggtcaaagaggagaaccgtcacctcaacaactcagtcatgatcctcacctacgcc
ctcatgaacgagggcgtgaccggtctgaaggagctggcgttcctgcgtgacctggcggag
cagaactcgctgaagtacggcgtgcccgaccgctcggcgctgccggtggtgaaagggagc
atgatggtcctgaaccagctcagtaatctggagaccaccgtgggacgcttctacatcaac
ctgcccaaccgcatgatagacctggcccgcttcagcctgtcataccaggacgccatggga
gacggtttcatcatgacggcgagccggccatgttactttggcaacctgttgctaggcgtg
gtgggagtagacgtgaacctggcctacattctagaggacgtcacctaccaccaggattcc
ttggcctcctacaccttcctcatagacaacaaaggttacaccctgatgcacccgtccctc
acacggccctacctgatgaccgagcctccactgcacactgacatcatccactatgaaaac
atcccagggttccccgtagtacgggacaacatactccgtctgcccctgggcagtcaggtg
atagctgtgcccaccaactcctctctgtcctggcacaccaaccggctacgagaccccagc
agggaggcctacaacgtcagctacgcatggaaactggtccaggacacatcgttcatcctg
tgcatagtgtacgtccagccagagatcccagtgaaacacctgaagaacctgaacactgct
cccagctccaaactgctctatcaccgcctggacctgctgggacaaccctcctcctgtctg
cacttcaaacagctggccaccgtcgagagccctacggtgatgctgtctgcagggagtttc
tcctctccctacgatcacctcagtcagccagagaccaaacgcatggtggaacactacaca
gcctacctcagtgacaacacacgcctcatagccaaccctggccttaagtcgtcggtcagg
aacgaggtgatggcgaccagtcacgtcacagatgaatggatgacactcatggagatgagt
agcctcaactgctacattgtgcgccgttacatagcaacgcccaatggggtgctgcggatt
taccccggctcgctaatggacaaagccttcgacccaacccggagacaatggtaccagcac
gctgtagccaacccaggcctcatcaccttcactgggccttacctggatgtgggcggggct
ggctacgtggtcaccatcagccacaccatccacgcctcaagttctcagatggccccaggg
tatgcggtagccgtgatgggcatagacttcaccctgcgttacttgtacaaggttctgctg
gacctgctacccatctgcaaccaggacaagggtaacaagatccggtgtttcatcatggag
gacaggggttacctggtggcccaccccaccctcatcgaccctaaaggccacgcccccgcc
gaacagcagcacatcacccacaaggaaccgctggtggccaacgacatcttgaaccacccc
aactttgtcaagaagaacctctgcaacagcttcagtgaccgcacggtccagcgcttctac
aagttcaacagcagtatcattggcgacctgacgaacctggtccacgggagccactgctcc
aagtaccgtctgacccgtatcccagggaccaacgctttcgcgggcatcgtcaacgagacg
tgcgactcgctggctttctgtgcctgcagcaccgtggaccgcctctgtctcaactgtcac
aggatggagcagaatgagtgtgagtgtccatgtgagtgccccctggaggtcaatgaatgt
actggcaaccttagctacgctgaaaacaggaaccccagctgcgaggtgcaccaggagccc
ctgtctctgacggtgatggactccagtctgcaggacaccctgccccagtgtatcaacacc
cgctgcagccaacgcttcaccagcagtgactgttttggcgtgctggactgtgagtggtgc
atggtggacagtgatgggaagacccacctggacaagccttactgtgccctgcagaaagag
tgcttcgggggcatcgtgggggccaagagcccttacatggatggcatggggatgctggat
gaagaggtagtgtctctgaacatgatgaagagtgccccggttgggccggttgccgggggt
attatgggctgcatcatggtgctggtgttggctgtctacgcctacagacaccagatccac
cgacgctcacatcaacacatgtcccctctggctgcacaggagatgtccgtcaggatgtct
aacctggataacgagagagacgagcgagacgaggacagccacgaagacagggggatcatc
agcaacacccggttcatcgcggcggtgatcgagagacacacccacagccctgaacgccgg
aggaggtactggggacggtcagggacggagagtgaccacggctacagcaccatgagtcct
caggaggacagcgagaaccctccctgcaacaacgaccccctgtcggccggcgtggacgtg
ggtaaccacgacgatgacctggacctggacacgccccctcagacggcggcgctgctcagc
cacaagttccacccgtaccgccacccgccttaccaccacccgctccacacgcaccgcctg
caggcggccgtcaccgtgcacagtgtggacgcagagtgctga
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