KEGG   Oncorhynchus kisutch (coho salmon): 109897251
Entry
109897251         CDS       T09179                                 
Name
(RefSeq) bromodomain-containing protein 4 isoform X1
  KO
K11722  bromodomain-containing protein 4
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:oki01001]
    109897251
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oki03021]
    109897251
   03036 Chromosome and associated proteins [BR:oki03036]
    109897251
Protein kinases [BR:oki01001]
 Serine/threonine kinases: Other
  BRD family [OT]
   109897251
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Brd4/P-TEFb complex
     109897251
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    109897251
SSDB
Motif
Pfam: Bromodomain BET BRD4_CDT
Other DBs
NCBI-GeneID: 109897251
NCBI-ProteinID: XP_031689676
Ensembl: ENSOKIG00005034731
LinkDB
Position
LG10:47686851..47742540
AA seq 1654 aa
MDYKMHAKSNDLLDFQTLDALLEKIAHYSSVSVKREPSEECNGIIGALSVESSAPPSRLN
NWCPAASAAPTPTLTPAPAPVPAPPVTSARMGDGLDATTVQMSSSGSSSSSQGGQPQPST
YVPTVPEFNPPPPEYINSSQPKRQTNQLQYLLKVVLKTLWKHHFSWPFQAPVDAVKLNLP
DYYKIIKVPMDMGTIKKRLENSYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEQLEK
MFLQKITEMPQDETEIAVMTGKGRGRGRREGGLNLKPGPTMDSPSTTPQTRGFSSHSPGP
QTRGPPVQQQTQDQGPPSLPPQPLMQALPSRVPPTLPVHTHAHAPQLGAPYSLGPSDLPL
QAPPKLPIMTSVPPPPTQTTLPPTSIQSTAPILQNPVPMAKQRKSQKRKADTTTPTANDQ
LSESSPAESKSGKTLPRRESARPTKLIKKEAPDSQHHLGLGIGLGLGGPGGPGVGAHSPK
QQEQLRYCSSLVRDMLHKKHAAYAWPFYKPVNVDMLGLHDYHDIIKHPMDLATVKLKLDN
RQYRDAQEFAADVRLMFSNCYKYNPPDHEVVAMARRLQDVFEMRFAKMPDEPEEMLASAP
APVLLQSSTPIIKAQPPPILNPASSILGPASSVKHPASSSDSSSDSSSESESSTNDLEEE
RAQRLAELQEQLKAVHEQLAALSQPQASKPKRKEKEKKKDKHKRKGAVEEIPEPAIQFPK
KTKNNNSSSNNKELLPKKTKKPSKKEGGAVKNNHSAALGPQAVLQPPALQPVSGLGEGLE
DDPAAAGAPGEKGRPMSYEEKRQLSLDINKLPGDKLGRVVHIIQSREPSLKNSNPDEIEI
DFETLKPSTLRELERYVSSCLRKNKKKVPVAEKTMEAMTAAKIKASSSSDSDSSDSSSSD
SDEEKGIPPKQKQKKGHGTNEGKKPHLHHTMSGAGPLPHGIPHPQGHPHPQGHPHPQGHP
HPQGHPHPQGHPHPQGPVLQPSIHLKQQQHHNPSPATYMAPPPVTVTALESSQLLENTFD
LLPHFGQQPLMHLSQHHHSSSPALPPHLNVHSAVGPVSPETHPFLNQHPIHPNPPNPNPA
LHNALPQQPSRPSHRAAALPPKPPQQQQPATQPTLLLQQQQQLQPQAPPPQHHLQPHILH
PAPPQSLQQRPLSPPTLTPQGLMSSLPPQMLLEDDEEVIPPLPLSQVHLYLQQLQQGQSQ
GRPGQQPHNPQQIMQSLQIRQQQQNQAPLLQSVQVQPSQPSLQPPQLSVQLPQPQSKPTP
PPRQAQQILPPHQVARHLQQHAQMGYPSQGPGAQQTGQSDRHAAAGQHKGSMQSSAKAQH
IIQQHLSPRQIKADPYNSGHLRENPSPIMMHSPHLPQYPPITHQSPPHNLQPKKEQRAPP
ALVGLKEEKLPPSPVMRGGEPFSPAMRQDPHKHIDCHSKPSLPGHTQQNVKSMDSSRPVI
RSSEPSGPPSSSSLPDKDKFKQEPKTPVAPKKVQDVKLKNMGSWASLAQKPTSAPLSAVK
SSSDSFEQFRRAAREKEEREKALKAQAEQAERDKLRREQEKLRGRDRDDEDILEPQQQSR
RVHEEPRSRRLEQQQHIQAPQPQQQPQAPAPQAQPAALPQPPQAPTPPQPSAQDQQRELA
RRREQERRRREAMAATIDMNFQSDLMAIFEENLF
NT seq 4965 nt   +upstreamnt  +downstreamnt
atggattacaagatgcatgctaagtctaacgatctactggattttcagactctggatgcc
cttttggaaaaaattgcacattattcttctgtctctgtgaaaagagagcctagtgaggag
tgcaatggaatcatcggtgctctctcagtggagtcgtccgcgccgccgtcgagactaaac
aactggtgtcccgcggcctccgccgcccctaccccaacccttacccctgctccagcccct
gtgcccgcgcccccagtcacctctgcaagaatgggggacggcctggacgcaaccacagtg
cagatgtcttcgtcgggcagcagtagtagcagccagggggggcagccccagccatccacc
tacgttccaaccgtgccagagtttaacccgccgcccccggagtacatcaactcatcgcag
cccaagcggcagaccaaccagttgcagtacctgctgaaggtggtgctgaagaccctgtgg
aagcaccacttctcctggcccttccaggcacccgtcgatgctgtcaagctcaacctgccg
gactactacaagattattaaagttcctatggatatgggaacaatcaagaagcgacttgag
aacagctactactggaacgcccaagaatgtattcaagatttcaacaccatgttcaccaac
tgctacatttacaacaagcctggggatgacatagtgttaatggctgagcagctggagaag
atgtttctccagaagattactgagatgccccaggacgagacggagattgctgtcatgact
ggcaagggacgaggccggggccgacgggaaggaggtctgaacttgaagccaggcccgact
atggattctccgtccaccaccccccagacacggggcttctccagccactccccaggccct
cagaccagaggaccaccagtgcagcaacagacccaggaccaggggccaccatctctacct
cctcagcccctcatgcaggccctgccctcccgcgtgcccccaacgctacctgtccacacc
catgcccatgcgccacagctgggggccccctactcactgggcccgtcggacctgcctctc
caggcccctcctaagctcccgattatgacctccgtgcctcctccacccacccagaccact
ctgccccccacctccatccagagcactgcccccatactgcagaaccccgtgcccatggcc
aaacagagaaagagccagaagaggaaagcagacacgaccacccccacggccaacgaccag
ctgagtgagtcttctccagccgagtccaagtcggggaagacgctgccgcgacgtgaaagc
gccaggcccaccaagctaatcaagaaggaggctccagactcccagcaccacctgggcctt
gggataggtctcggtctagggggacccggaggaccaggggtaggggctcatagccccaag
cagcaggagcagctacggtactgctccagcttggtccgagacatgttacataagaagcac
gcggcctacgcctggcccttctacaagccagtaaacgtggacatgctggggctgcacgac
taccacgacatcatcaaacaccccatggaccttgccaccgtcaagttgaagctggacaac
aggcagtacagagacgcccaggagtttgctgccgacgtgcggttaatgttctctaactgc
tacaagtataacccacccgaccacgaggtggtggctatggcacgcagactacaggacgtg
tttgagatgcgcttcgccaagatgccagatgagcccgaggagatgttggcttcggctcct
gcccccgtgctgctccagtcctccacccccatcatcaaggcccagccgccgcccatccta
aaccctgcctcttccatcctaggtcctgcctcctcggtcaaacaccctgcttcctcctcg
gacagctccagtgattcgtcttctgagtcggaatcctccacaaacgacttggaggaggag
agagcccagagactggccgagctacaagaacagctcaaagctgtccacgagcagctggcg
gccctctcgcagccacaggccagcaaaccaaagagaaaagagaaggagaagaagaaagac
aagcacaaaaggaaaggagcggtggaggagatcccggagccggccattcagttccccaag
aagaccaagaacaacaacagcagcagcaacaacaaggagctcctgcccaagaagaccaag
aaacccagtaagaaggagggaggtgcggtgaagaacaaccactctgcagccctgggccct
caggcagtgctgcagcccccagctctgcagcccgtgtcgggcttgggggagggcctggag
gatgacccggctgcagctggagcccccggggagaagggtaggcccatgtcgtatgaggag
aagaggcagctgagtctggacatcaacaagctgcccggcgacaagctgggtcgtgtggtc
cacatcatccagtccagagagccctcgctgaagaactccaaccccgacgagatcgagata
gactttgagacgctcaagccgtccacgctgagagagctggagagatacgtgtcatcgtgc
ctccgcaagaacaagaagaaggttcctgtggcagagaagaccatggaggccatgactgcc
gccaagatcaaggccagctcctcctctgactccgacagcagcgactccagctcctcagac
agtgatgaggagaagggaatccctcctaaacagaaacagaagaaaggccatgggaccaac
gaagggaagaagccccatctccaccataccatgtctggagctgggcccctcccccatggc
atccctcacccccagggccaccctcacccccagggccaccctcacccccagggccaccct
cacccccagggccaccctcacccccagggccaccctcacccccagggtcctgtcctgcag
cccagcatccacctgaagcaacaacagcaccataacccctcccccgccacctacatggcc
cctcccccggtaacggtcacggcgttggagtcctcccagttgctggagaacacgtttgat
ttgctgccccacttcggccagcagccactcatgcacctgtcccagcaccaccactcctcg
tcgcctgccttgcccccccacctcaacgttcactcggcagtggggccggtgtccccggag
acgcacccctttctcaaccagcaccccatccaccccaaccctcccaaccctaacccagct
ttgcacaacgccttgccccagcagccatctcgacccagccacagggcagcagctctacct
cccaaacccccgcagcagcagcaaccagcgacccagccaaccctactactacaacaacaa
caacagctccagccacaagcccctccaccccagcaccacctccagccccacattctccac
cccgcccccccccagtccctgcagcagcggcccctttccccccccaccctcacccctcag
ggcctgatgtcctccctgcccccccagatgctcctggaggacgatgaggaggtgattccg
cccttacccctcagccaggtgcatctctacctgcaacagctccagcagggacagagccag
ggaagacctggccaacaaccacacaatccccagcagatcatgcagtctctccagattcgc
caacaacaacagaaccaggctcccctactgcagtctgtacaggtccagccctcccaaccc
tctcttcagccaccccagctctcagtccagcttccccagccccagtccaaacccaccccc
cccccgcgccaggcccagcagatcctacccccgcaccaggtagcccgccacctgcagcag
catgcacagatgggttacccctcccaggggcctggggcgcagcagacgggtcagtcagac
aggcacgccgctgcagggcaacacaagggttccatgcagtcctccgccaaagcacagcat
atcatccagcaacacctctcccctcgacagatcaaggctgatccatacaacagcgggcac
ctgagggagaacccctcccccatcatgatgcattccccccacctcccccagtatcccccc
ataacgcaccagtctccgccacacaacctgcagcccaagaaagagcagcgtgcgcccccg
gccctggtaggcttgaaagaagagaagttgcctccctctccagtgatgagaggaggagag
cctttcagcccagccatgagacaagaccctcacaaacacatagattgccacagcaagccc
tctctaccaggtcacacacagcagaatgtaaagtcgatggacagctctcggccagtcatt
cgttcctcagagcccagcggtcctccctcctcctcctccctgccagacaaggacaagttc
aaacaggagcccaaaacgcccgttgcgcccaaaaaggtacaggatgtgaaactgaagaac
atgggttcgtgggccagcctggcccagaagcccacgtcagcgcccttgtctgcagtgaag
tcgtctagcgacagcttcgagcagttccgccgggccgcccgggagaaagaggagagagaa
aaggctcttaaggcccaggcagagcaggctgagagggacaaactgcgccgggagcaggag
aaactacgtggtcgtgacagggatgatgaggatatcctggagcctcagcagcagtcgagg
agagttcatgaggagcctcgaagcagacgtctggagcagcagcaacacatccaggccccc
caaccccagcagcaaccccaggcaccagccccccaggcccagcccgctgccctcccccag
cccccacaggcccccacgccgccccagccctcagcccaggaccagcagagggagctagcg
cgacgccgcgagcaggagaggaggaggagagaagcgatggcggcaaccattgacatgaat
ttccaaagcgacctgatggctatctttgaggagaacttgttctga

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