Oncorhynchus kisutch (coho salmon): 109897276
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Entry
109897276 CDS
T09179
Name
(RefSeq) syntaxin-1B
KO
K08486
syntaxin 1B/2/3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109897276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109897276
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109897276
Membrane trafficking [BR:
oki04131
]
SNARE
Syntaxin (Qa)
Stx-PM
109897276
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
109897276
Exosomal proteins of other body fluids (saliva and urine)
109897276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
GNVR
Spectrin_Anc-1
VBS_C3G9
Lzipper-MIP1
Lge1
YtxH
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
109897276
NCBI-ProteinID:
XP_031689765
Ensembl:
ENSOKIG00005010007
LinkDB
All DBs
Position
LG10:51593484..51660157
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AA seq
288 aa
AA seq
DB search
MKDRTQELRSAKDSDDDEEVVQVDRDHFMDEFFEQVEEIRVCIDKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQIDKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DFVERAVSDTKKAVKYQSQARKKKLMIIVCCTILGVVLASTIGGYLGF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcgtacacaagaactacgaagtgctaaggacagcgatgatgatgaagaagtt
gtccaggttgatcgggatcacttcatggatgagttcttcgaacaggtggaagagatccga
gtctgtatagataagctgtcagaagatgtggagcaggtcaagaagcagcatagcgccatc
ctggcagcgcccaaccctgacgaaaagaccaagcaggagttggaggacctcacagctgac
atcaagaagacagccaataaagttcgctcaaaattaaaagcaatcgagcagagcattgag
caggaggaggggctgaacagatcatctgcagacctgcgaattcgtaagacacagcactcg
acgctgtcacgcaagtttgtagaggtgatgaccgagtacaacaccacgcagtccaaatac
agggaccgctgcaaggaccgtatccagagacagctggagatcactgggagaacaaccacc
aacgaggagctggaggatatgctggagagtggcaagcttgccattttcaccgatgacatc
aagatggactctcagatagacaagcaagctctgaatgagattgagacccgacacaccgag
atcatcaagctggagaacagcatccgtgagctgcacgacatgtttgtggacatggccatg
ctggtcgaaagccagggagagatgattgacagaattgagtacaacgtggagcactccgtg
gactttgtggagcgggcggtgtctgacaccaagaaggctgtcaaataccagagccaggct
cgcaagaagaagctcatgatcatcgtctgctgtactattctgggagttgtcttggcgtcc
actatcggcggatacctgggcttttaa
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integrated database retrieval system