Oncorhynchus kisutch (coho salmon): 109897280
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Entry
109897280 CDS
T09179
Name
(RefSeq) rho GTPase-activating protein 23-like isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109897280
Membrane trafficking [BR:
oki04131
]
Endosome - Golgi transport
Others
Others
109897280
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
109897280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PDZ_6
PH_9
PDZ
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109897280
NCBI-ProteinID:
XP_031689809
Ensembl:
ENSOKIG00005033552
LinkDB
All DBs
Position
LG10:complement(52336164..52436197)
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AA seq
1861 aa
AA seq
DB search
MLASGRPVSGNLCAPMPAAMPPYPALPAESEWCFQNPVGVDCSAAEPRCIWLAVLRGAPL
PSPSPPTMRPVLVGSGHGCTSRALQRSHQPRAKGWRDGLSSAGDNPRPAMGARGEGVAVG
WQGPRTLLLQKNSQGFGFTLRHFIVYPPESALHTSLKDEENGNGKGRSRLEPMDTIFVKN
VRERGPAHQGGLCTGDRLVKVNGESVLGKTYSQVIALIQNSESVLELSIMPKGEDVLQLV
SAYSQDAYLRGNEPYTGGARNLPVPPPLCYAPRTKSQPPAGAPAPMGQNQLDNWSRWAGS
ASPLSPLDNRSTVGSPASWQEGLGGELGGVCHSSPPYRTEEIQYGVTGQQPTGQTRGRSY
SSSSSSGGPLSSPLHVHYVNHNAAGTATTASQPQKGSQAWASPPQPSPSRSQHCQQALSE
WYYSQAAEQRQGRSGSMHQRHRSYSQDRLCETGPGCHRRGPGGWPHSASQDTLMLLQQSG
PGPHGDPSWTYGDWEGARDQSHPSSYGSRARSESLLVQYDRYGRSLEMLESPRSERPAWL
QQASQQAPRTEAYQRQGNHYGVAPAPSMGRQAQPHHKTTPQPHSQSHSQPQPQQPAPQSR
RLPTGQSLDDQPVGYRSYSPSFNRKTGRIMQQPSFRDPSYLGPHLSWAPTPKTSPPEGVV
PSVPSPLASTTPEPLDRAYRPTNHERGAVEGQAEVLAQTQEVKLRQKPPTGRRSAHAMRH
PHYTLPVDGTEPPVFPPDPHDTAPAPRPSGDGAPHRTNGNLAPLSVEDDAMASIPFIDEP
TSPSADLRARHVPASSVVSSGMSSAPAIVTSPASPTFTFPLTRLFSHDCSSIKSSRRSSY
LLAITTERSKSCDEGLNTFRGEEGRVFSRLPKRVKSFFTDGSLDSLGAAEEVRSKRHSTS
ELGSISYSDIWREGWLHYKQILTEKGKKVGSGMRPWRRVFSVLRSHSLFLYKDKREAVLR
GATLGGDADEEQPISIRGCLVDIAYSETKRKHALRLTTQDFCEYLLQAEDREDMLDWIKV
ISENSKTDNEELGFSRQALISKKLNDYRKQSPTGNKPDSSPRVSRAKPSFLLAKMENAAG
APRSPKPEGKDESSPPKSPWGINIMKKSKKSAPKAFGVRLEDCQPAANNKFIPMIVEICC
GLVEEMGLEYTGIYRVPGNNAVVSSLQDQLNKGSDINPAEEKWQDLNVISSLLKSFFRKL
PEPLFTDDKYNDFIDANRMENAGDRLKTMKKLIRDLPDHYYHTLKFLVGHLKTVADHCEK
NKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKIVETLIQHYLWFFSEDLDKDEKTP
VDTKDLVPAPNIDHLLSNIGKTALLGEASDSTNSDSAKSKGSWGSKRDLTAKDFLTLSIM
SAVTGRKRRNRHNGHLVGSSTDDDSEHEPIKASHLGVEEGEEAGLVVAGADTAPRAEGEE
EEEDDEEEEEEEEEEEESVVERVRVPVEVKEVVVPSMPCGGEKKKAGQTVMLLPEEEAVT
SEVKGRAWRGPEDARSIVSGYSTLSTLGRSLASEGRCDEADDERSELVSETDNESGFASR
SLTQERPEKHPPASITPTLTPPTPTQTPTQPPTAGQRSFLYTHYKPHPVSATPQHTTPTP
STHTQDPGERSEGGARSTTPSSSSFSSSSTTHRLHTRPSFNSHKLIQCDTLARKKLKDRG
KTKARSLDLLDLPGPSGEEEGAGAPGAQRDRSRTNPSTGSSQESLRPPRPKEPLPPSEAA
SFTPSGTGQGQGRGSLADQVRARLLGSADDLRIVGLRKPLSPETRRKRRAWRRHTVVVSP
TETGDKRPALATNMFPMSPATSKPQESPLDPQELDPRHSLPLGQNPPATRRAPASRFHQY
L
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atgttggcatcaggtcggcccgtgtcgggtaatctctgcgccccaatgcccgcggctatg
cccccctaccctgctttgccagctgagtcagagtggtgcttccagaatcccgtaggggtg
gactgtagtgccgccgagcctcgctgcatctggttggcagtgctgcgtggtgcccccttg
ccctcaccttcgccccccaccatgaggccagtcctggtcggcagtgggcacggctgcacc
agcagggccctgcaacgttctcaccagcccagggcaaaggggtggagagatgggctctcc
tcggcaggcgacaaccctcggcctgcgatgggggcgcgaggagagggcgtcgccgttggc
tggcaaggcccccggacgctactactccagaagaactctcagggcttcggcttcacgctg
cgccacttcatcgtctacccaccagagtctgccctgcacaccagcctcaaggacgaggag
aacgggaatgggaaggggagaagtagattggagccaatggacaccatatttgtcaagaat
gtgagagagcgaggtcccgctcaccagggtggcttgtgtacaggggatcggctggtgaag
gtgaatggagagagtgtcctggggaaaacttactcccaggtgatcgccctcatacagaac
agtgagagtgtgttggagctctctataatgccaaaaggtgaagacgtgctgcagctggta
agtgcatactcccaggatgcctacctgaggggcaacgagccttacacagggggagcccgg
aatcttccggtacccccgcccctctgctacgctccccgcaccaagtcccagcctcccgcc
ggggccccggcccccatgggccagaaccagctggacaactggagccgctgggcaggctcc
gccagccccttgtcccccctggacaaccgctccaccgtgggcagcccggccagctggcag
gagggactgggcggagagctggggggcgtgtgccacagtagccccccctacaggacagag
gagatccagtacggtgtgaccgggcagcagcctacgggacagaccaggggccgctcctac
tcctcatcttcttcttcaggagggcccctcagcagccctctgcatgtccattatgtcaac
cacaatgctgctggcactgccaccaccgcctctcagccccagaaaggcagccaggcctgg
gccagccctccccagccgagccccagccgcagccagcactgccaacaggccctgtctgag
tggtactacagccaagctgctgagcagcgtcagggccgcagtggcagcatgcaccaacgc
caccgcagctactctcaggacaggctgtgtgagacaggccctgggtgccaccgccggggt
ccgggcggctggccccacagcgcctcccaggacaccctgatgctactgcagcagtcgggc
cccggcccccacggggacccttcttggacatacggagactgggagggggcccgggaccag
agtcacccctcctcctacggcagcagagcccggtcggagagcctgctggtacagtacgac
cgctatggccgttcgctggagatgttggagtcgccccgttccgagaggcccgcctggctg
cagcaggcctcacagcaagcacccaggactgaggcctaccagaggcaggggaaccattac
ggtgtcgcaccggccccctctatgggccgacaagcacagccgcaccacaaaaccaccccc
caaccccactcacagtctcactcacagccccagccccaacaaccagccccccagagcaga
cgtctgcccaccggacagagcctggatgaccagccagtaggttaccgcagctacagcccc
tccttcaaccgcaagacaggccgcatcatgcagcaaccctccttcagggacccctcctac
cttggcccccacctcagctgggcccccacccccaaaaccagccccccagagggtgttgtc
ccctcagttccatcccccctggcctccaccacccccgagccccttgacagggcctaccgc
cccaccaaccatgagagaggggcagtggaaggccaggcggaggtgctagctcagacccag
gaagtcaaactgagacagaaaccccccacgggacgaaggagcgcccacgccatgcgccac
ccccactacaccctgcctgtagatggcacagaaccccctgtgttcccccctgacccccac
gacactgcccctgcccctcgcccctcaggagatggtgccccgcaccgtaccaatggcaac
ctggcccccctgtctgtagaggatgacgcaatggcatccattccctttatagatgagccg
acgagccccagcgctgacctccgtgcccgccacgtacccgcctcctccgtggtgtccagc
ggcatgagctcagcgcccgccatcgtcaccagccccgcctcccccaccttcaccttcccc
ctaaccaggctcttctcacacgactgcagcagtattaaatccagtcgccgttcctcctat
cttctagccatcaccacggaacgctccaagtcatgtgacgagggactcaacaccttcagg
ggagaggagggccgcgtcttctcgaggctgccaaagagagtgaagagtttcttcactgat
gggtctctggacagtctgggggcagcggaggaggtgcgctccaaacgccactccacctca
gagctgggcagcatcagctacagtgacatatggagagagggatggctgcactacaaacag
atcctcacggagaagggcaagaaggtgggcagcggcatgcgtccgtggaggcgggtcttc
tcggtgttgcgctcccactcgctcttcctctacaaggacaagcgggaggcggtcctgcgg
ggcgccactctgggaggcgatgccgacgaggagcagccaatcagcatccggggctgcctg
gtggacatagcgtacagcgagaccaagcgcaagcacgcactgcgtctgaccactcaggac
ttttgtgagtacctgctgcaggccgaggacagagaggacatgctggactggatcaaggtc
atcagtgagaacagcaagaccgacaatgaggagctgggattctcaagacaggctctgatc
agtaagaagctcaatgactacaggaaacagagtccaacaggcaacaagccggactcctcg
cccagggtgtcccgtgccaagccgtccttcctgctggccaagatggagaacgctgccggg
gcgccgcgctcacccaaacctgagggcaaagatgagagcagcccccctaagtcaccatgg
gggatcaacatcatgaagaagtccaagaagtcagcgcccaaggcttttggagtgcggcta
gaagactgccagccagccgccaacaacaaattcatccctatgatcgtggagatctgctgt
gggctggtggaggagatgggtctggagtacaccggcatctacagggtcccagggaacaac
gcagtggtgtccagccttcaggaccagctcaacaaggggtcggacatcaaccctgcagag
gagaaatggcaggacctgaacgtgatcagcagcttgctcaagtctttcttcaggaaactt
ccggagcccctcttcactgacgataagtacaatgacttcatcgacgctaaccggatggag
aatgccggggaccggctaaagaccatgaaaaaactgatccgtgacttaccggaccattac
taccacactctcaagttcctggttggccatctgaagacggtagccgaccactgtgagaaa
aacaagatggaacctcgcaacttggccctggtgttcgggcccacgctggtgcggacgtct
gaagacaacatgacagacatggtgactcacatgcctgaccgctacaagatagtcgagacg
ctcatccaacactatctctggtttttcagtgaggacctggacaaggatgagaagactcca
gtagacacgaaggacctggtgcctgcccccaatatcgaccacttgctctccaacattggc
aagaccgctctgctaggggaggcgtcagactcaaccaacagtgactcagctaaatctaag
ggttcgtgggggtcaaagcgagacctcactgccaaggactttctgaccctgtccatcatg
tccgccgtcaccggacgcaagcgcaggaatcgccacaacggccacctcgtgggcagcagc
acagacgacgactcggagcacgagccaatcaaagccagccacctgggggtggaggaggga
gaagaggcggggttggtggtggcaggagcagacaccgccccacgagcagagggagaggag
gaggaggaagatgatgaggaggaggaggaggaggaagaagaagaagaagagtctgtagta
gagagagtgagagtgccggtggaggtaaaggaggtggtagttcccagcatgccgtgcggt
ggtgagaaaaagaaagcagggcagacggtgatgctgctccctgaggaagaggcagtgacg
tcagaggtgaagggcagggcgtggcgggggccagaggacgctcgttctatcgtctccggt
tactccaccctctccacactggggcggagcctggcatctgagggacggtgtgatgaagct
gacgacgagcgcagtgagctggtgagcgagacggacaatgagagcggattcgcctcgcgc
tcccttacccaggagagacctgagaaacacccccctgcatccattacacccacactcaca
ccccctacccccacacagacccccacacaaccccccacagcaggacaacgaagcttcctc
tacacacactacaaaccccaccctgtctctgccacaccccagcacaccacccccaccccc
tccacacacactcaggaccctggggagaggagcgagggtggggcgcgatccaccaccccc
tcctcctcctccttctcgtcgtcctccaccacccacagactgcacacccggccctccttc
aactcccacaagctgatccaatgtgacacgctggccaggaagaagctaaaggacagaggg
aagaccaaggctcgttctctggacctgctggacctccctgggccttcaggagaagaggag
ggagctggggcaccaggggcccagagggaccgatccaggaccaacccttccacagggagc
agccaggagagcctacgtccaccccggcccaaagaacctctgccgcccagcgaggctgcc
tctttcacccccagcgggacagggcagggtcaggggcgagggtctctggctgaccaggtg
cgtgcgcgcctgctgggctcggctgatgacctgcgtatcgtggggctgaggaagccactc
tccccggagacgaggaggaagagacgggcctggagaagacacactgtggtggtctcacct
accgagactggcgacaagaggcctgcgctagccaccaacatgttccccatgtcgccggcc
acttccaaaccacaggagtcacccctcgacccccaggagcttgacccaagacattctctt
cccctgggccagaatccccccgccacacgccgagcaccagcctccaggttccatcagtac
ctgtaa
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