Oncorhynchus kisutch (coho salmon): 109897322
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Entry
109897322 CDS
T09179
Name
(RefSeq) zinc finger BED domain-containing protein 6-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109897322
04121 Ubiquitin system [BR:
oki04121
]
109897322
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
109897322
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109897322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
Gly_radical
hAT-like_RNase-H
DBD_Tnp_Hermes
DUF5371
Motif
Other DBs
NCBI-GeneID:
109897322
NCBI-ProteinID:
XP_031690052
LinkDB
All DBs
Position
LG10:58361020..58377790
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AA seq
650 aa
AA seq
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MMTEFKRAFSLVWDHFTLVTPNKVQCALCSQRLSFNKNTSAMLRHLRSRHPSEAWYSNST
SGAHSSTSNSTSGVHSTFSNSIISGSGVHSSFSGTTGLNSMFTNSAAAGHHIQVRTTRQE
DLDDALVNMLVKDTQPFSVVEEEGFTAFVQKLDPSYNLPNKQALKKMVGSRCEFINDNVV
SQMVISDFVSLTSDMWTSIDKHSYISVTGHLVAENAKLSTFLLGISKLPENHKVIHIEEA
KNQLVASWGLHSRVAALVTENSENMVATVQKLGILQLPSFAHVLNLVIKRSMEASLELQD
IRSQARAIVSFFKSNQNAEMRLAEVQGQLGRPEQKLIQEVDSRWNSSFSMLERVFDQRES
VAAALSTLDTDIIPLGSADYEVIHQCLGVLGSFNQATAELASEKRVSASKVIPLVRMLKI
TLENKHGAIIHSTATQLASNLQRELQTSCSMVETEPILGLSALLDPRFKMLAFGNQGYAQ
EAVKLLTSECASLIRINPDKDAILPPSTTRSMTPSLTSPHTSSWAMETASISMATSPSKS
HDGGLWEMFDSKVGETQSVQSSTADAAVEVQHYLSDPYLNRVENPMHYWEKHSKVYPHLF
QLARKYLSVPASSVPCERIFTKAGDVFNKKRSCLSMKAVEQIMLLNKGLV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgatgactgaatttaagagagccttctcactggtgtgggatcacttcactctagtgaca
cccaataaggtccagtgcgccctctgttcacaacggcttagcttcaacaaaaacacctcc
gccatgttaaggcacctacgttcaaggcacccaagcgaggcttggtacagcaactcaaca
tctggggcccactcaagcacaagcaactcaacatctggagtccactcaacgttctcaaac
tcaataattagtggttctggagtccactcatcgttctctggtactacaggactaaactca
atgtttacaaacagtgctgctgctggacaccacatccaagtcaggaccaccagacaagag
gacctggatgatgccctagtcaacatgttggttaaagacacccagccattttcagtagtc
gaggaagaaggattcactgctttcgtccaaaagctagacccaagctacaatcttccaaac
aagcaagcactgaagaaaatggtggggtctcggtgtgaattcatcaatgataatgttgta
tctcagatggtaatttctgactttgtcagcctgacttcggacatgtggacatctatagac
aagcacagttacatttcagtgacggggcatttggtagcagaaaatgccaagttatccact
ttcctccttgggatttctaagctgcctgaaaaccacaaagtgatccacattgaggaggcc
aaaaaccaactggtggcaagctggggcctccacagcagggtcgctgcattggtcacagag
aacagcgaaaatatggtagccacggttcagaaattaggaatcctccagttgccctctttt
gcacacgtcctgaaccttgtgattaagaggtccatggaggcttctttggagctgcaggac
atccgctcccaagcgcgggctatcgtgtctttcttcaagtcgaatcagaacgcagagatg
aggttagctgaggtgcaggggcagctaggcaggccggagcagaagctgatccaggaagtg
gactcgagatggaacagtagcttttctatgctggaacgcgtctttgatcagagggagtct
gtggctgctgctctcagcaccctggacacggacatcatccctctgggatctgctgactat
gaggtcatccaccagtgtctcggagtgctgggttccttcaaccaggccacagctgagctc
gcctcagagaaacgcgtctcggcttccaaggtcattcctcttgtccggatgctgaagata
acccttgagaataagcacggtgccatcatacactctacggctacacagctggcgtctaac
ctgcagagggagcttcagacgagctgcagtatggtggagaccgagccaatcctaggtcta
tcggctctcctagacccgcgcttcaaaatgttggccttcgggaaccaaggctacgctcag
gaggcggtgaagctcctcacctccgagtgcgcctcattaatccggataaatcccgacaag
gacgccattctaccgccctccaccaccaggtcgatgacgccctccctgacatcaccccac
acctcctcctgggcaatggaaacagcttccatctccatggcaacatctccgtctaagtcc
cacgatgggggtctgtgggagatgtttgacagtaaagtgggtgagacacagagcgtccag
agcagcacagcggatgcagcggtggaggtacaacactacctcagtgacccgtacctgaac
cgagtggagaaccccatgcactactgggagaagcactccaaggtgtacccgcacctgttc
cagctggctcggaaatacctcagcgttcccgcctcgtctgtgccatgcgagcgcatattc
accaaagctggagatgtgttcaataaaaagaggagttgcctcagtatgaaggctgtagag
cagataatgctgttgaataaaggtctagtatag
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