Oncorhynchus kisutch (coho salmon): 109897348
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Entry
109897348 CDS
T09179
Name
(RefSeq) ran GTPase-activating protein 1-like isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109897348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109897348
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109897348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Nop14
CobT
Tim54
BUD22
CPSF100_C
SDA1_dom
Motif
Other DBs
NCBI-GeneID:
109897348
NCBI-ProteinID:
XP_031683425
Ensembl:
ENSOKIG00005007651
LinkDB
All DBs
Position
LG6:complement(75516373..75522851)
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AA seq
583 aa
AA seq
DB search
MATDAVAQLADSLAKTQVTEGELSYKGQGRKFDNAQSVEEMVKEIQEFKGLQALRLEGNT
YGVEAAQAIAKALEIKSEFKYCYWSDMFTGRLRSEIPPALNSLGAALMTAGARLTVLDLS
DNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGIGGGKILAAALTECYKQSSAQGTPL
GLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHPGVTALATAMQHNPQLRV
LNLNDNTFTKKGAIAMAQALKHLRSIQVINFGDCLVRSEGAIAIAEAVTEGLPILKELNL
SFGEITGEAALLVAQSVEGKATLEKLDLNGNCLGDEGCDAVREVMDGLNMGDLLGSLSDD
EGEPEEDEDEEEGDEDEEGDEDEDDDEDDEEDEDDEEDEDDVEEEEDSIVNQVSSPPLVP
RSPDAASFLCFPSPDKLLKLGTKRALLFEQQVDVADAGKTAEAFLKISSVYNEEDEQVKS
AVLDSIDAILRKAFASPSFQGYNFVSSLLVMLGLLKSEDEVKPVHVVPGHLQALEYVVRQ
DYFPQDHIAVLEAFMSRHVQALESCSSARNILKSTLEQVRSEN
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatgctgttgcacagttggccgactctctggcaaaaactcaggtgactgag
ggagagttgagttataaaggccaaggacgcaaattcgacaatgcacaatctgtggaagag
atggtgaaagagatccaggagttcaaggggttgcaagcgctcaggctggaggggaacact
tatggggtggaggcagcacaggccatcgctaaagccctggagataaagagtgaatttaag
tactgttactggagtgacatgtttactgggcgactgcgttctgagatccctccagccctg
aactccctgggtgcggcgctaatgacagcaggcgccagactgaccgtgctggacctcagt
gacaatgcctttggaccagacggggtgaagggcatcgagaagttgctcaagagcactgcc
tgtcacacactgcaggaactgaggctcaacaactgcggcatgggcattggtggaggcaag
atcttagctgcagcgttgactgagtgctataagcagtccagtgcacagggcacccccctt
gggctgaaggtgttcatcgcaggcagaaaccgtctggagaacgatggggccactgccctt
gcccaggccttccagctgatgggtagtctggaggaggtgcacgtgccccagaatgggatc
aaccaccctggggtgactgctctggccactgccatgcaacacaacccccagctccgggtc
ctcaacctcaatgacaacaccttcaccaagaaaggagctatcgccatggcacaggctctg
aaacatttgcgcagtatccaggtgataaactttggagactgtctggtgcgttccgagggg
gctatagccatcgcagaggcagtcactgaggggcttcccatcctcaaggagctgaatctg
tcatttggggagatcacaggagaagctgcactgctggtggcacaatcagttgagggcaaa
gccacactggagaaactggacctaaatggtaactgcctgggggatgagggctgtgatgct
gtcagagaggtaatggatggcctgaacatgggagacctgctgggatcactcagcgacgat
gaaggggagccggaggaggatgaagacgaggaggagggtgatgaagacgaggagggtgat
gaagacgaggatgatgatgaagacgacgaggaggatgaagatgacgaggaggatgaagat
gatgtggaggaagaagaggacagcattgtgaatcaggtttcctctcctccgttagtgccc
cgatccccagatgccgcctccttcctctgcttcccctcccccgacaagctgctcaaactg
ggcaccaagagggccctgctctttgaacagcaggtagatgtggctgatgctggtaagaca
gcggaggctttcctgaaaatctcctctgtgtacaatgaggaagatgaacaggttaagagt
gctgtcctagacagtattgatgcaattctcaggaaagccttcgcaagcccctccttccaa
ggttacaactttgtatcatcgctgttagtaatgctgggactcctcaagagtgaggacgag
gtgaagccggtacatgtggtgcctggtcatttgcaggccctggagtacgttgtgcgtcag
gactacttcccccaggaccacatcgctgtgctggaggccttcatgtcccgacatgtccag
gccctggagtcgtgcagcagcgccaggaacatcctcaagtccacgctggagcaggtcagg
tctgagaactga
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