Oncorhynchus kisutch (coho salmon): 109897411
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Entry
109897411 CDS
T09179
Name
(RefSeq) TBC1 domain family member 17-like
KO
K19945
TBC1 domain family member 17
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109897411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109897411
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109897411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
109897411
NCBI-ProteinID:
XP_031683740
Ensembl:
ENSOKIG00005027998
LinkDB
All DBs
Position
LG6:complement(81466391..81477430)
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AA seq
642 aa
AA seq
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MEPKAETIHKLVFEKEGVYLHTNAKRSNQDTTIPGFIRIVERGGEPALEWSALEDEGRNA
AAVFYTKKDGEGGVEDTNFDPGYEPDWAVISTVKRDQVREHPPVKETSQWSFSLPLSELY
SLRRSRFSLGRNFLVFTSRGGHPLPPLHFHRGGTRELLRAMQRYIILAPSPVDGRLFLAY
PHDSGALSQSFDELHLFDDGSSDLVSRFIQDPYATTFGGFSKVTNFFRGALRPPDSPFHP
RGPQDHHGPPSADDEPGFELITCGVELGPKPDVTRGQPLDKWEEFLDPEGRVKDPQQIKE
LVFRGGITPSLRKDVWKFLLGFYPWNSTVKEREDILRMKTDEYFRMKVQWKSVSEEQEMR
NSLLRGYRSLIERDVSRTDRHNTFFSGNDNPGLTLLNDVLMTYCMFNFDLGYVQGMSDLL
APLLFVTQNEVESFWCLTGFMEMVHQNFEESQEAMKQQLLQLSLLMKALDPELLDYLDSQ
DSGSLCFCFRWLLIWFKREFSFEDILSLWEVLWTRLPCENFHLLMAASILESQRGEFIGS
DHDFNTILKHINELTMKLDLQTVLRGAEANYLQLACCKELPVKVQEVIGLYVPPSPDDET
SAESESHETQQLLSQSQAAATETSQSSNSTAAAAARPRPTYP
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggagccaaaggctgagactattcacaagctggtgtttgagaaggagggggtttacctt
cacaccaatgccaagaggagcaaccaggacaccacaatcccaggattcatccgtatagtg
gaacggggtggggagccagctttggagtggagcgcactagaggatgagggccgcaatgcg
gctgctgtattctacactaaaaaggatggagaaggaggggtggaggacaccaactttgac
cctggctatgagccagactgggcagtcatcagcacagtgaagagagaccaagtcagagag
cacccccccgtcaaagagacaagccagtggtcgttctccctgcctctgtcggagctgtac
tctctgcgacggtcccgtttctccctgggccgtaacttcttggtttttaccagcaggggt
ggccaccccctccctcctctgcacttccacagggggggcaccagggagctgttgagggcc
atgcagcgttacatcatcctggccccatcacctgtagatggtcgtctcttcctagcgtat
ccccatgactctggggctctctctcagtcctttgatgagctgcacctctttgacgatgga
agctctgaccttgtctctaggtttatccaggacccttatgccaccacctttgggggattc
tccaaggtcaccaatttcttcagaggggctctacgaccaccagattcccccttccacccc
cgtggccctcaggaccaccatgggcccccctcagctgacgacgaaccaggctttgagctc
atcacctgtggggtggagcttggccctaaaccagacgtaaccaggggacagcctctcgac
aaatgggaggagttcctggatccagaggggcgtgtgaaggacccacagcaaatcaaagag
ctggtcttcagggggggtatcacaccctccctgaggaaggacgtgtggaagtttctgctg
ggtttctatccctggaatagtactgtgaaagagagggaggacattctgaggatgaaaaca
gatgagtatttcagaatgaaggttcagtggaagtcagtcagtgaagagcaggagatgagg
aactccctcctcagaggataccgcagcctgatagaaagggacgtgagtcggacggacaga
cacaacaccttcttctctggcaacgacaacccaggcctgactcttctcaatgacgtgctg
atgacatactgcatgttcaactttgatctgggctatgtccaggggatgagtgacctcttg
gctcctctcctttttgtcactcagaacgaagtggagtccttctggtgtctgacaggtttt
atggagatggtgcaccagaactttgaggagtctcaggaggccatgaagcaacagctcctt
cagctcagcctgctgatgaaggctctggaccctgagctccttgactacctggactcccag
gacagtggctctctgtgcttctgtttccgttggttactgatttggtttaagagagagttc
tccttcgaggacatcctgtccctttgggaggttctttggactcgtctgccctgtgaaaac
ttccatctgctgatggccgcttccattctggaatcacagaggggggagttcatcggctct
gaccacgacttcaacactattttgaagcacatcaatgaactgaccatgaagctggatctg
cagacagtcctacgaggagcagaagctaactacctacagttggcctgctgcaaagagctg
ccggtgaaggtgcaggaggtcattggtttgtacgttccccccagccctgatgacgagacg
agcgcagaatcagagtcacatgagacgcagcagcttctcagccaatcacaggcagcagct
acagaaacgagccagtcaagtaacagcactgctgctgcagcagcacgccctcgccctacc
tacccgtaa
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