Oncorhynchus kisutch (coho salmon): 109897777
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Entry
109897777 CDS
T09179
Name
(RefSeq) host cell factor 1 isoform X2
KO
K14966
host cell factor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03083
Polycomb repressive complex
oki04980
Cobalamin transport and metabolism
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109897777
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
109897777
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109897777
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109897777
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109897777
03029 Mitochondrial biogenesis [BR:
oki03029
]
109897777
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109897777
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
109897777
HMT complexes
COMPASS/SET1 complex
109897777
MLL-HCF complex
109897777
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
109897777
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
109897777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
109897777
NCBI-ProteinID:
XP_020347947
Ensembl:
ENSOKIG00005014244
LinkDB
All DBs
Position
LG1:21010510..21025944
Genome browser
AA seq
1675 aa
AA seq
DB search
MTFPGSMVSGTTGSTLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKSPKNGPPPCARLGHSFSLVGNKCFLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKESKKSHLIIYGGMSGCRLGDLWTLDIDT
LTWTKPSVNGTSPLPRSLHSAITITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMAWESVLMDTLEDNIPRARAGHCSVSINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPSRVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPAAAAATSPALTATSSL
PGNLPKSPAAPSAQNLPHTAILKVAAPQSGTGTSLVTVRANQAVKSPVTVTSLPPGVRMM
VPAQTAQGTPIGNSPQMSGMAALAAAAAATQKIPPSSGTGLNLPAGATLVKTMAVSPGST
TVKMSSPLMVSNPATRMLKTAAAQVGTVTVSSPNSPNRPIITVHKSGTVTVAQQHQVVTT
MVGGVTKTITLVKSPLTMGGSGTLISSLGKMISVVQTKPVQTSAVTGQASTNPLSQLIQT
KGSLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGMSPTTTKQGTTIIKTIP
MSAIMNQPGATVTNSTGKMPYTILTTKMMTTGTPGKIITTMPKLGTVTGQQGLTQVVLKG
ALGQPGTILRTLPMGGVRLVTPVTMTSVKPNVTTLVVKGTTGVTTLGTVTGTVSSSLAGG
SLASANASLATPITTLGTIATLPSQVINPTAITVSAAQACLTTVTTLSTSTMSVNQPTQV
TLITTPSGVEAQPVQDLPVSFLASPTSEQPSTEAGDAPGTVTMVCSNPPCETHETGTTNT
ATTASANMSVCSNPPCETHETGTTNTATTSSTNMGGAMRATTSAYPGTARGNQGPENLRT
GTTVTPATARSNMGSAQTGTVQSPKQPAVGLTVCSNPPCETHETGTTNTPSQASSNMAGN
QTGTVTVTGTTNTATQSSSGMGNGKTNTVQKVCSNPPCETHETGTTNTPSQASSNMAGNQ
TGTVTVQGVCSDPPCETHETGTTNTATTATADGADGGTSSTETPSTTASGTTPATIQSRA
ITTVTQSTPAPGPSVPSISSITEGAAVSTEEPMQTDAATEGGDNAMETGLPPELMSEGQI
GTGLSAEELAVTAAAQAAAQAAAQAAATEEAQARAIQAVLQAAQQATMNEGDSGLDRQQT
TTIPIVLTQQELAALVQQQQQLQEAQAQAQAQQQGNAQALPTEGLAPADSLNDPTSESNG
HNEMAAAASSDVASLLPRTSTETLAPSSTFAVSSPANLQPAASLAEVANGIEGGKLYPQP
APIKTLVKKENQWFDVGIVKVTNMVVTHFFIPGDDSQVEDDSGAIPDYNQMRKMELQPGT
AYKFRVAGINACGRGSFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKI
IEYSVYLAIQSTQTAEPKTSTPGQLAFMRVYCGPNPSCLVQSTSLSNAHIDYTTKPAIIF
RIAARNEKGYGPATQVRWLQESSKDGASAKPAPKRPAVSSPDVKAAGQKKARTDQ
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgacatttcctggttcaatggtgtctgggaccacaggctcaactctgcagccacgatgg
aagcgggttctaggatggtctgggcctgtgcctcggccaagacatggtcacagagccgtt
gctataaaggaattgatggttgtttttggaggaggaaatgaaggaattgtggatgaattg
catgtctacaacacagcaacaaaccaatggtttatccctgcggttcgtggtgatattccc
cctggatgtgctgcatacggttttgtttgtgatggcacccggcttctggtttttggtgga
atggtggaatatggaaaatacagcaacgatctctatgagctacaggccagcagatgggaa
tggaaaaagttgaaagctaagtctcccaaaaatggcccacctccctgtgctcgacttggt
cacagtttctctctggtgggcaacaagtgcttcctgtttggagggctggctaatgacagc
gaggaccccaaaaacaacatccctagatacctgaatgatctgtacaccctggagcttcgt
gctggctccagtgttgtaggctgggatataccaattacttatggcgttttgccgccacct
cgcgagagccacactgctgtagtgtacacagaaaaggagagcaagaaatctcaccttatc
atctatggagggatgagtggctgtcgtctgggagatctatggactcttgacattgacacc
ctgacctggaccaagccatcggtgaatggcacatcgcccctgcccaggagtctccactct
gccatcaccataacaaacaagatgtttgtttttgggggatgggttcccctggttatggat
gacgtgaaggtggcaacacatgagaaagaatggaagtgcacaaacactctggcctgccta
aatcttgactccatggcctgggaatcagtgttgatggataccttggaggacaatatcccc
agggcccgggcaggacattgttctgtgtccatcaactctaggttgtatgtctggagtggc
cgtgacggttaccgtaaagcatggaacaaccaagtctgctgtaaagacctctggtacctt
gagacagagaggccacacgctccctcgagagtgcagcttgtccgtgccaacaccaactcc
ctggaggtgagctggggcgctgtgtccaccgcagacacctacctgctgcagctgcagaag
tacgacatcccagctgccgctgctgccacctccccggccctcaccgccacctcttctcta
ccagggaacttgcccaaaagcccagcggctccctctgctcagaacctaccacacacagcc
atcttgaaggttgcagcccctcagtctggcacaggtacctcccttgtcactgtgcgagcc
aaccaggctgtgaaatcccctgtcactgtgacatcacttcctccaggggttcggatgatg
gttcctgcccagactgcccaaggaacgccaatcggcaatagccctcagatgagtggcatg
gcagctttggctgcagctgcagcagcaacacaaaagatcccgccctcttcaggcactggg
ctcaaccttccagcaggtgccacccttgtcaaaacgatggctgtctcccctggctccacc
acagtcaaaatgtcatctcctctcatggtcagtaacccagccactcgcatgctgaagact
gctgcagctcaggtgggcacagtgactgtatcatcacccaactcgcccaaccgacccatc
atcactgtgcacaagtcaggcacggtcaccgtagcccagcaacaccaggtggttaccacc
atggtgggaggagtcaccaagacaatcaccctggtcaagagcccccttactatgggaggc
agcggcactctgatctccagccttggcaagatgatatctgtggtacaaaccaagccagtg
cagacatcagctgttacaggccaggcttccactaaccctctatcacagctcatacagact
aagggttctctccctgctggcaccatactgaagctggtgacttcagcagatggcaagccc
accaccatcatcaccacgtcccaggcagggggcacagggaacaaacccaccatcctgaac
atcagcggcatgtcgcccaccacaaccaaacagggcaccaccatcatcaagaccatccct
atgtctgctattatgaaccagcctggagccacagtgaccaacagcacagggaagatgccc
tataccattctcaccaccaagatgatgaccactggcactccaggcaaaatcatcactacc
atgcctaagcttggcactgtaactggccaacaggggctgacacaggtggttttgaagggc
gctctgggccaacctggcaccattctgcgcactctacccatgggtggagtccgactcgtc
accccggttacgatgacttctgtcaagcccaatgtaactacactggtcgtcaagggaaca
actggtgtcaccaccctggggacagtcacaggcacagtctcctccagcctggcagggggc
agtttagccagtgccaatgcctctctggcaactcccatcaccaccctgggcaccattgcc
accctgcccagccaagtcatcaaccctacggccatcactgtgtcagcggcccaggcctgt
ctgaccacagtcactaccctgtccacctccaccatgtcggtgaaccagccaacccaggtg
actctcatcaccacccccagcggggttgaggcccagccagtgcaggacctgcccgtgtcc
ttcctggcctcccccacctctgagcagccctccactgaggccggggatgcccctggtact
gtcactatggtctgctccaacccaccctgtgagacccacgagacaggaaccaccaacaca
gccaccactgcgtctgctaacatgtcggtgtgctccaaccctccctgtgagacccacgag
actggaaccaccaacaccgcaacaacctcttccaccaacatgggaggggcaatgagggca
accacctctgcttaccccggaaccgccagaggcaaccagggaccagagaacctgcgcacc
ggaaccaccgtcacccccgccacagcacgctctaacatgggctcagcccagaccggcact
gtgcagagtcccaagcagccagccgtgggccttacagtttgctctaacccaccctgcgag
acacatgaaacggggaccaccaacaccccatcccaggccagttccaatatggctgggaac
cagacaggaacagtgacggtgacgggcacaaccaacactgccactcagtcctcgtccggc
atgggtaacgggaagactaacactgtgcagaaagtgtgctcaaacccaccctgcgagacc
catgaaacggggaccaccaataccccatcccaggccagttccaacatggctgggaaccag
acaggaacagtgacggtgcagggggtgtgttcagaccccccctgtgaaacccacgagact
ggcaccaccaacacggcaactactgccacagcagatggagcagacggtggcaccagcagt
acagagactccctccactactgcatcaggaacaaccccagccaccatccagagcagagcg
atcactactgtgacccagtccacaccagccccagggccctcagtaccttccatttcttcg
atcactgagggtgcagcagtttccacagaagagcccatgcagactgatgcggccacagag
gggggagacaacgctatggagactgggctgcccccagagctgatgtcagagggacagata
ggaacaggtctgtctgcagaggagctggctgtgactgcagcagcacaggcagcagcacag
gcagcagcacaggctgcagccactgaggaggcccaggcccgggccatccaggcagttctc
caggcagcacagcaggccaccatgaacgagggtgattctggcttggacagacagcagacc
accacaatccccatcgttctgacccagcaagagctggcagccctggtccagcagcaacag
cagctccaggaagctcaggcccaggctcaggcccagcagcaaggaaacgcccaagccctg
cccactgaaggcctggcccccgcagacagcctgaatgaccccacgtctgagagcaatgga
cacaatgagatggctgcagccgcttccagcgatgtggcatcactgctgccgcgcacctcc
acggagaccctggccccctcaagcacatttgcggtttccagtccagccaacctgcaacct
gcagcttctctagcagaggtggccaatggcatcgagggcgggaagctataccctcaacca
gcgcctatcaagacacttgtaaaaaaagagaaccagtggttcgatgttggaatcgttaag
gtgacaaacatggtggtcacacacttcttcatcccaggggatgattctcaagtagaggat
gactcgggcgccattccagactataaccagatgaggaaaatggagctgcagcctggcaca
gcttacaagttccgtgttgctggcatcaatgcttgtggtcgtggttccttctcagagatc
tctgctttcaagacctgtctaccaggcttccccggagcaccttgtgccatcaaaatcagc
aagagcccagatggtgcccaccttacctgggagcctccttcggtgacatcagggaagatc
attgagtattctgtgtacctggctatccaaagcacccagacagctgagcctaagacctcc
accccaggccagctggccttcatgcgggtgtactgtgggcccaacccctcctgcctggtg
cagtccaccagcctttcgaacgcccacatagactacaccaccaagcccgccatcatcttt
cgtattgccgcacgcaatgagaagggctatggccctgccacacaagtccgatggctgcaa
gagtccagcaaagatggtgcctcggcaaaacctgccccaaaaagaccagcagtgtcctca
cctgatgttaaggctgctggtcaaaagaaagcaagaacggaccagtga
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integrated database retrieval system