KEGG   Oncorhynchus kisutch (coho salmon): 109897777
Entry
109897777         CDS       T09179                                 
Name
(RefSeq) host cell factor 1 isoform X2
  KO
K14966  host cell factor 1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03083  Polycomb repressive complex
oki04980  Cobalamin transport and metabolism
oki05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    109897777
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    109897777
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109897777
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oki01009]
    109897777
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oki03036]
    109897777
   03029 Mitochondrial biogenesis [BR:oki03029]
    109897777
Protein phosphatases and associated proteins [BR:oki01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109897777
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     109897777
   HMT complexes
    COMPASS/SET1 complex
     109897777
    MLL-HCF complex
     109897777
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     109897777
Mitochondrial biogenesis [BR:oki03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    109897777
SSDB
Motif
Pfam: Kelch_3 Kelch_5 Kelch_4 Kelch_1 Kelch_6 fn3
Other DBs
NCBI-GeneID: 109897777
NCBI-ProteinID: XP_020347947
Ensembl: ENSOKIG00005014244
LinkDB
Position
LG1:21010510..21025944
AA seq 1675 aa
MTFPGSMVSGTTGSTLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKSPKNGPPPCARLGHSFSLVGNKCFLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKESKKSHLIIYGGMSGCRLGDLWTLDIDT
LTWTKPSVNGTSPLPRSLHSAITITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMAWESVLMDTLEDNIPRARAGHCSVSINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPSRVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPAAAAATSPALTATSSL
PGNLPKSPAAPSAQNLPHTAILKVAAPQSGTGTSLVTVRANQAVKSPVTVTSLPPGVRMM
VPAQTAQGTPIGNSPQMSGMAALAAAAAATQKIPPSSGTGLNLPAGATLVKTMAVSPGST
TVKMSSPLMVSNPATRMLKTAAAQVGTVTVSSPNSPNRPIITVHKSGTVTVAQQHQVVTT
MVGGVTKTITLVKSPLTMGGSGTLISSLGKMISVVQTKPVQTSAVTGQASTNPLSQLIQT
KGSLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGMSPTTTKQGTTIIKTIP
MSAIMNQPGATVTNSTGKMPYTILTTKMMTTGTPGKIITTMPKLGTVTGQQGLTQVVLKG
ALGQPGTILRTLPMGGVRLVTPVTMTSVKPNVTTLVVKGTTGVTTLGTVTGTVSSSLAGG
SLASANASLATPITTLGTIATLPSQVINPTAITVSAAQACLTTVTTLSTSTMSVNQPTQV
TLITTPSGVEAQPVQDLPVSFLASPTSEQPSTEAGDAPGTVTMVCSNPPCETHETGTTNT
ATTASANMSVCSNPPCETHETGTTNTATTSSTNMGGAMRATTSAYPGTARGNQGPENLRT
GTTVTPATARSNMGSAQTGTVQSPKQPAVGLTVCSNPPCETHETGTTNTPSQASSNMAGN
QTGTVTVTGTTNTATQSSSGMGNGKTNTVQKVCSNPPCETHETGTTNTPSQASSNMAGNQ
TGTVTVQGVCSDPPCETHETGTTNTATTATADGADGGTSSTETPSTTASGTTPATIQSRA
ITTVTQSTPAPGPSVPSISSITEGAAVSTEEPMQTDAATEGGDNAMETGLPPELMSEGQI
GTGLSAEELAVTAAAQAAAQAAAQAAATEEAQARAIQAVLQAAQQATMNEGDSGLDRQQT
TTIPIVLTQQELAALVQQQQQLQEAQAQAQAQQQGNAQALPTEGLAPADSLNDPTSESNG
HNEMAAAASSDVASLLPRTSTETLAPSSTFAVSSPANLQPAASLAEVANGIEGGKLYPQP
APIKTLVKKENQWFDVGIVKVTNMVVTHFFIPGDDSQVEDDSGAIPDYNQMRKMELQPGT
AYKFRVAGINACGRGSFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKI
IEYSVYLAIQSTQTAEPKTSTPGQLAFMRVYCGPNPSCLVQSTSLSNAHIDYTTKPAIIF
RIAARNEKGYGPATQVRWLQESSKDGASAKPAPKRPAVSSPDVKAAGQKKARTDQ
NT seq 5028 nt   +upstreamnt  +downstreamnt
atgacatttcctggttcaatggtgtctgggaccacaggctcaactctgcagccacgatgg
aagcgggttctaggatggtctgggcctgtgcctcggccaagacatggtcacagagccgtt
gctataaaggaattgatggttgtttttggaggaggaaatgaaggaattgtggatgaattg
catgtctacaacacagcaacaaaccaatggtttatccctgcggttcgtggtgatattccc
cctggatgtgctgcatacggttttgtttgtgatggcacccggcttctggtttttggtgga
atggtggaatatggaaaatacagcaacgatctctatgagctacaggccagcagatgggaa
tggaaaaagttgaaagctaagtctcccaaaaatggcccacctccctgtgctcgacttggt
cacagtttctctctggtgggcaacaagtgcttcctgtttggagggctggctaatgacagc
gaggaccccaaaaacaacatccctagatacctgaatgatctgtacaccctggagcttcgt
gctggctccagtgttgtaggctgggatataccaattacttatggcgttttgccgccacct
cgcgagagccacactgctgtagtgtacacagaaaaggagagcaagaaatctcaccttatc
atctatggagggatgagtggctgtcgtctgggagatctatggactcttgacattgacacc
ctgacctggaccaagccatcggtgaatggcacatcgcccctgcccaggagtctccactct
gccatcaccataacaaacaagatgtttgtttttgggggatgggttcccctggttatggat
gacgtgaaggtggcaacacatgagaaagaatggaagtgcacaaacactctggcctgccta
aatcttgactccatggcctgggaatcagtgttgatggataccttggaggacaatatcccc
agggcccgggcaggacattgttctgtgtccatcaactctaggttgtatgtctggagtggc
cgtgacggttaccgtaaagcatggaacaaccaagtctgctgtaaagacctctggtacctt
gagacagagaggccacacgctccctcgagagtgcagcttgtccgtgccaacaccaactcc
ctggaggtgagctggggcgctgtgtccaccgcagacacctacctgctgcagctgcagaag
tacgacatcccagctgccgctgctgccacctccccggccctcaccgccacctcttctcta
ccagggaacttgcccaaaagcccagcggctccctctgctcagaacctaccacacacagcc
atcttgaaggttgcagcccctcagtctggcacaggtacctcccttgtcactgtgcgagcc
aaccaggctgtgaaatcccctgtcactgtgacatcacttcctccaggggttcggatgatg
gttcctgcccagactgcccaaggaacgccaatcggcaatagccctcagatgagtggcatg
gcagctttggctgcagctgcagcagcaacacaaaagatcccgccctcttcaggcactggg
ctcaaccttccagcaggtgccacccttgtcaaaacgatggctgtctcccctggctccacc
acagtcaaaatgtcatctcctctcatggtcagtaacccagccactcgcatgctgaagact
gctgcagctcaggtgggcacagtgactgtatcatcacccaactcgcccaaccgacccatc
atcactgtgcacaagtcaggcacggtcaccgtagcccagcaacaccaggtggttaccacc
atggtgggaggagtcaccaagacaatcaccctggtcaagagcccccttactatgggaggc
agcggcactctgatctccagccttggcaagatgatatctgtggtacaaaccaagccagtg
cagacatcagctgttacaggccaggcttccactaaccctctatcacagctcatacagact
aagggttctctccctgctggcaccatactgaagctggtgacttcagcagatggcaagccc
accaccatcatcaccacgtcccaggcagggggcacagggaacaaacccaccatcctgaac
atcagcggcatgtcgcccaccacaaccaaacagggcaccaccatcatcaagaccatccct
atgtctgctattatgaaccagcctggagccacagtgaccaacagcacagggaagatgccc
tataccattctcaccaccaagatgatgaccactggcactccaggcaaaatcatcactacc
atgcctaagcttggcactgtaactggccaacaggggctgacacaggtggttttgaagggc
gctctgggccaacctggcaccattctgcgcactctacccatgggtggagtccgactcgtc
accccggttacgatgacttctgtcaagcccaatgtaactacactggtcgtcaagggaaca
actggtgtcaccaccctggggacagtcacaggcacagtctcctccagcctggcagggggc
agtttagccagtgccaatgcctctctggcaactcccatcaccaccctgggcaccattgcc
accctgcccagccaagtcatcaaccctacggccatcactgtgtcagcggcccaggcctgt
ctgaccacagtcactaccctgtccacctccaccatgtcggtgaaccagccaacccaggtg
actctcatcaccacccccagcggggttgaggcccagccagtgcaggacctgcccgtgtcc
ttcctggcctcccccacctctgagcagccctccactgaggccggggatgcccctggtact
gtcactatggtctgctccaacccaccctgtgagacccacgagacaggaaccaccaacaca
gccaccactgcgtctgctaacatgtcggtgtgctccaaccctccctgtgagacccacgag
actggaaccaccaacaccgcaacaacctcttccaccaacatgggaggggcaatgagggca
accacctctgcttaccccggaaccgccagaggcaaccagggaccagagaacctgcgcacc
ggaaccaccgtcacccccgccacagcacgctctaacatgggctcagcccagaccggcact
gtgcagagtcccaagcagccagccgtgggccttacagtttgctctaacccaccctgcgag
acacatgaaacggggaccaccaacaccccatcccaggccagttccaatatggctgggaac
cagacaggaacagtgacggtgacgggcacaaccaacactgccactcagtcctcgtccggc
atgggtaacgggaagactaacactgtgcagaaagtgtgctcaaacccaccctgcgagacc
catgaaacggggaccaccaataccccatcccaggccagttccaacatggctgggaaccag
acaggaacagtgacggtgcagggggtgtgttcagaccccccctgtgaaacccacgagact
ggcaccaccaacacggcaactactgccacagcagatggagcagacggtggcaccagcagt
acagagactccctccactactgcatcaggaacaaccccagccaccatccagagcagagcg
atcactactgtgacccagtccacaccagccccagggccctcagtaccttccatttcttcg
atcactgagggtgcagcagtttccacagaagagcccatgcagactgatgcggccacagag
gggggagacaacgctatggagactgggctgcccccagagctgatgtcagagggacagata
ggaacaggtctgtctgcagaggagctggctgtgactgcagcagcacaggcagcagcacag
gcagcagcacaggctgcagccactgaggaggcccaggcccgggccatccaggcagttctc
caggcagcacagcaggccaccatgaacgagggtgattctggcttggacagacagcagacc
accacaatccccatcgttctgacccagcaagagctggcagccctggtccagcagcaacag
cagctccaggaagctcaggcccaggctcaggcccagcagcaaggaaacgcccaagccctg
cccactgaaggcctggcccccgcagacagcctgaatgaccccacgtctgagagcaatgga
cacaatgagatggctgcagccgcttccagcgatgtggcatcactgctgccgcgcacctcc
acggagaccctggccccctcaagcacatttgcggtttccagtccagccaacctgcaacct
gcagcttctctagcagaggtggccaatggcatcgagggcgggaagctataccctcaacca
gcgcctatcaagacacttgtaaaaaaagagaaccagtggttcgatgttggaatcgttaag
gtgacaaacatggtggtcacacacttcttcatcccaggggatgattctcaagtagaggat
gactcgggcgccattccagactataaccagatgaggaaaatggagctgcagcctggcaca
gcttacaagttccgtgttgctggcatcaatgcttgtggtcgtggttccttctcagagatc
tctgctttcaagacctgtctaccaggcttccccggagcaccttgtgccatcaaaatcagc
aagagcccagatggtgcccaccttacctgggagcctccttcggtgacatcagggaagatc
attgagtattctgtgtacctggctatccaaagcacccagacagctgagcctaagacctcc
accccaggccagctggccttcatgcgggtgtactgtgggcccaacccctcctgcctggtg
cagtccaccagcctttcgaacgcccacatagactacaccaccaagcccgccatcatcttt
cgtattgccgcacgcaatgagaagggctatggccctgccacacaagtccgatggctgcaa
gagtccagcaaagatggtgcctcggcaaaacctgccccaaaaagaccagcagtgtcctca
cctgatgttaaggctgctggtcaaaagaaagcaagaacggaccagtga

DBGET integrated database retrieval system