Oncorhynchus kisutch (coho salmon): 109897783
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Entry
109897783 CDS
T09179
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109897783
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109897783
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oki00535
]
109897783
Enzymes [BR:
oki01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
109897783
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
109897783
Proteoglycans [BR:
oki00535
]
Cell surface proteoglycans
Others
109897783
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
PTPlike_phytase
DSPc
PTP-NADK
GUN4_N
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
109897783
NCBI-ProteinID:
XP_020347935
Ensembl:
ENSOKIG00005031860
LinkDB
All DBs
Position
LG10:complement(14063213..14162901)
Genome browser
AA seq
1501 aa
AA seq
DB search
METAASRCFLLLTQLLLVSKLAEPVQGYRRRAQAAQRKFADDIDWSYAGTLNQNNWANKY
PSCSNARQSPINIEEELTQVKVQFQKLEFEGWEEAMSDMTTIKNDGKTVAVNPEGDFYVS
GGGLRGRFKVGRITFHWGLCKASTEGSEHSLSGVKYPLEMQIYCYEALHFESIDQAIKDG
GRITALSVLLETGIEDNDNYVAIIDGINSVSRFGKSGMVGPFSLRGLLPNSTDKYFTYNG
SLTTPPCTDTVEWIVFKNTVAISDTQLEMFCEVMTMQQAGYVMLMDYLQNNFREQQQQFM
GQVFSSYTGTEEVLTPICSSEPENVQADPHNLTSLLVMWERPRAVYDAGIEKYSVTYRLA
QGEDSATFQYLTDGDQDVGAMLQDLIANTSYVVQVVAVCTNGLYGHVSEQLSVDMPFEDP
EVTPYPDSTEFEGEEDYGPWAKPGEELDNDMDWTTQSTTRTRPTSTTGPPSLPLPAIRTT
TPFVQRRTLTPGTPSRTTQPNRAQTSTEQSERYRSTARAPAEGAVSAGSRGRGRTQKYTT
TVTTPQSRTDVINTSSTKTGKGRGVAYPVTVPSGKGSGVSMATSASSLSQGEPPWPTSPS
MPLFSSTASSFAGALLQTTQPVFNATPSSSKDHWVSALRTSAPSSSYSASPLTPTLPPEL
QTVDSSASGSTLFGEAQKELDEEWDRVQSSASGEGALPYIPTFTPSLTSEATATPNIDTE
ELSSSFYFESENGSAVTNDTAGSTATVSGVTAAAPWSLGGEVESGSGQGESLYDNETSSD
FTITERTERDSEEEEPVAEASNSSHESRVGLARERERRTMVPLAVISTLTFLGLIVLVGI
LIYWRKCFQIAHFYIEDNTSPRVISVSPTSMRTDTDKQEALPVKQFVKHVTELHHTNAFS
REFEILKECYEEVQACPVDLGITTDGSNHPDNKNKNRYVNILAYDHSRVRLSTQADQDGK
SGDYINANYVDGFNKSRAYIAAQGPLKSSTVDFWRMVWEQNVGVIIMITNLVEKGRRKCD
QYWPLDSQEEYGGFLVTVKSSKVLAHYTQRTFTLRNTKVKKVSLKGRINERTVTQYHYTQ
WPDMGVPEYTLPVLTFVQKSSKARTDDMGPIVVHCSAGVGRTGTYIVLDSMLKQIKEEGT
VNIMGFLKHIRTQRNYLVQTEEQYVFIHDALVEAILGKETEVPSSRIHSYVNDLLTPGPS
GRTQLEKQFKLISSSNAIQYDYSAALKECNREKNRNSSLIPDERSRVCLSTVAGETTSDY
INASYLTGYRQSTEFIVTQNPLAGTVTDFWRMIWDHNAQVIVTLPRTPSLAEGEEPYVYW
PRKEQPISYEAFTVTLQSENHMCLANEEMLVVQHYVLEATQDDYVLEVRHYRAPHWPNPD
SPISSTFELLSLVKEESSSKEGPTVVHDQVGGVTAGTFCALSTLVRQLEAESSVDVYQVA
KMFNLMRPRTFTDVEQYQFLYTAMLSLVGTQEDERMLQSSDNNGTVPGGTASTAESLESL
V
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggctgcttcaagatgtttcctattgctcactcagctcttgctcgtctctaaa
ttagctgaacctgtgcaaggatacagacgccgggcccaggctgcccagcgcaaattcgct
gatgacatcgactggtcctatgcagggactctaaaccaaaacaactgggccaacaagtac
ccatcatgcagcaatgctagacagtcgcccatcaacatcgaggaggagctgacacaggtc
aaagttcagttccaaaagctggagtttgagggctgggaggaggcgatgtctgatatgacc
accatcaagaatgacggcaagaccgtggcggtgaacccagagggggacttctatgtgagt
ggaggggggctgaggggcaggtttaaggtcgggagaatcaccttccactggggcctctgc
aaggcttccacagagggctccgagcacagtctcagtggggtcaagtaccccctggagatg
cagatctactgttatgaagcgcttcactttgagtccatagaccaggccatcaaggacggg
ggcaggatcacagctctctctgtgctgttagagacaggcatcgaagacaatgacaactac
gtggccattatcgacggaatcaacagtgtcagccgattcggtaagagtgggatggtgggt
cccttctctctccgtggcctcctgcccaactcaacagataagtacttcacctacaatggc
tccctcaccaccccaccctgcactgataccgtggagtggattgtcttcaagaacactgtg
gccatctccgacacgcagctggagatgttctgtgaggtgatgaccatgcagcaggcaggc
tatgtgatgttgatggactacctgcagaacaacttcagggagcagcagcagcagttcatg
ggacaggtcttctcctcctataccggcacggaggaggtcctcactcccatctgtagttca
gagccggagaatgtgcaggcggacccccataacctgaccagcctgctggtgatgtgggag
cggccgagggcggtgtacgacgccgggatagagaagtactcagtcacctacaggctggcc
caaggagaggactctgcaaccttccaatacctgactgacggcgaccaggatgtgggggcc
atgctgcaggacctgatagccaatactagctatgtggtgcaggtggtggccgtgtgcacc
aacggtctatacggtcacgtgagcgagcagctgtccgtcgacatgcccttcgaagacccc
gaggtaacaccttatccagattctactgagtttgaaggggaagaggactatggaccctgg
gctaaaccaggtgaagaactggacaatgacatggactggacaacccaaagcactacgaga
accaggcccacttcaaccactggcccacccagcctccccttgcctgctatcagaaccacc
accccatttgtccagaggagaaccctcacaccaggcactccatccaggaccactcaaccc
aaccgagcacagacttccacagagcagagtgagaggtatcgcagtacagccagagcacca
gcagagggtgccgtctcagcaggcagcagaggcaggggaagaacccagaagtataccact
acagtgaccactccgcaatcacgcactgatgtcatcaacacttcatcaaccaagaccggg
aagggcagaggggtggcgtatcctgtgaccgtcccaagcggaaaaggcagcggtgtttcc
atggccacttccgcctcctccctctctcagggagaaccaccatggcctacaagtcccagc
atgcccttgttttcatccactgcctcctccttcgccggggcactcttgcagaccacgcag
ccggtgttcaacgccacaccgtccagctccaaggaccactgggtctcggccctccgaacc
tcggccccctcctcttcctactcggcctcccccctcacacccaccctcccccctgaactg
cagacggtagacagtagtgcctctggctcgaccctgtttggagaagcccagaaggagcta
gatgaggagtgggacagggttcagagttcagcctcgggggagggcgcgctcccttacatc
cccaccttcaccccctcactcacctctgaagccaccgccactcccaacatcgacacagaa
gaactctcctcatcgttctactttgagagcgagaacggcagtgccgtcaccaacgataca
gcgggcagcacagcaacagtatctggggtgaccgcggcggcgccctggtcgctaggtggg
gaggtggagagtggctcggggcagggcgagagcctgtacgacaacgagacgtcatcagac
ttcactatcaccgagcgcacagagagagactctgaggaggaggagccagttgcagaggcc
agtaacagcagccatgagtccagggtgggtctggccagggagagagagaggaggaccatg
gtccctctggcagtgatctccaccctcaccttcctgggactcatcgtcctggtgggaatc
ctcatctactggaggaagtgtttccagattgcccatttctacatagaggacaacacatcc
cccagagtcatatctgtttcacccacatccatgcgtacagatacagataaacaagaagcc
cttccagtgaagcagtttgtcaagcacgtgacagagctccaccacaccaatgcattctcc
agagagtttgagatattgaaagagtgttatgaggaggtgcaggcgtgcccggtggacctg
ggtatcaccacagacggctccaaccatccagacaacaagaacaagaaccgatacgttaat
atcctggcctatgaccacagccgagtaagactctcaacccaggctgaccaagatgggaag
agtggagattacattaacgcaaactacgttgacggtttcaacaagtccagggcctacatc
gcagcccagggccctctcaagtccagcaccgtggacttctggaggatggtgtgggaacag
aacgtgggcgtcatcatcatgattaccaacttggtagagaagggacggaggaagtgtgac
cagtactggcccctggatagccaggaagagtacggtggtttcctggtgacggtgaagagc
agtaaggttctggcccactacacccagagaaccttcaccctcaggaacaccaaggtcaaa
aaggtttctctgaaggggcggattaacgagcggaccgtgacccagtaccactacactcag
tggccggacatgggcgtgcccgagtacactctgcccgtgctcaccttcgtccagaagtcc
tccaaagccaggacagatgacatggggcctatcgtagtgcactgcagtgcaggggttggc
aggactggaacctacatagtgttggatagcatgctgaagcagatcaaagaagagggcacg
gtcaacatcatgggcttcctcaaacacatccgcacacagaggaactacctggtacagaca
gaggagcagtatgtgttcatccacgatgctctagtggaggccatcttgggcaaggagacg
gaggttccctccagtcgcatccacagctacgtcaacgacctcctgaccccagggccctcc
ggaaggacacagctagagaaacagtttaagctgatatcctcgtccaatgccatacagtac
gactactcagcagccctgaaagagtgtaacagagagaagaacagaaactcctctttaata
cccgatgaaaggtcacgggtttgtctgtccacagtggctggagaaactacatcagactac
atcaacgcctcatatctcacggggtaccggcagagcactgagttcatcgtgacccaaaac
ccgctggccggcacagtgacagacttctggaggatgatctgggatcacaacgctcaggtc
atagtcacactgccgcgaacaccaagcctggcagagggggaggagccatacgtgtactgg
ccccgcaaggagcagccaatcagctatgaggcgttcacagtgaccctgcagagcgagaac
cacatgtgtctggccaacgaggagatgctggtggtgcagcactacgtcctggaggctaca
caggatgattatgttctggaagtgaggcactaccgggcgcctcactggcccaacccggac
agccccatcagcagcacctttgagctgctcagtctggtgaaggaggagagctcctccaag
gagggccccacggtggtccacgaccaggttggcggtgttactgcgggaaccttctgtgcc
ctgtctactctggtgcgccaactagaggcggagagctctgtggacgtgtaccaggtggcc
aagatgttcaacctcatgaggcccaggaccttcactgatgttgagcagtatcagttccta
tacacagccatgctgagtctggtgggcacacaggaggacgagaggatgctccagtcctca
gacaacaacggaacagtcccagggggcaccgccagcacagcagagagccttgagtccctg
gtgtaa
DBGET
integrated database retrieval system
