Oncorhynchus kisutch (coho salmon): 109897813
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Entry
109897813 CDS
T09179
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X9
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109897813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109897813
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109897813
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109897813
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
109897813
NCBI-ProteinID:
XP_020347994
Ensembl:
ENSOKIG00005039255
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All DBs
Position
LG10:complement(15210810..15220849)
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AA seq
522 aa
AA seq
DB search
MFSATRKKFVEGVESDYPDENMYYSQPSMYPHRSDKDMLSSPSPSSSGQLSQLGASLYGP
QSALGFSIRGMGNNTPQLNRSLTQGTPLPSHITPTTGVPTMSLHTPPSPSRGILPMNSRN
MLNHSQVGQGIGMGGGRTNSMGSSGLGSPNRSPPSIICMPKQQPARQPFTINSMSGFGMN
RNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRSRREGSANPTPLLNPLAGRAP
YVGMVTKPSNEPTQDFSIHNEDFPALPGPNYKDPTLSNDDSKTNLNSTGKSTSSADGPKF
PGDKTSSAQNNSQKKGIQVLPDGRVTNIPGGMVTDQFGMIGLLTFIRAAETDPGMVHLAL
GSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLAR
YGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGT
YYFFDCLNWRKVAKEFHLEYEKLEERPHVPSTFNYNPAQQAF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgctacgagaaagaagtttgtagagggggtggaaagtgactaccctgatgag
aacatgtactacagccagccgtccatgtacccacatcggtcggacaaagacatgctctcg
tctccctcaccgtcgtcatcaggtcaactatcccagcttggggccagtttatatggccca
cagagtgcactaggcttctcgataaggggcatgggcaacaacacgcctcagttaaaccgc
agcttaacgcaaggcactccgctaccgagccatatcacccccaccactggggtacccacc
atgtccctccataccccaccctcgccaagcagggggatcctgccgatgaactcgaggaac
atgctgaaccactcccaggtgggccagggcatcgggatgggcggcggcaggaccaacagc
atgggcagttcagggctgggtagccccaaccgcagcccccccagcattatctgtatgccc
aaacagcagcctgcacggcagcccttcaccatcaacagcatgtcgggattcgggatgaac
cggaaccaggcgtttggaatgaacaactcgttatcaagcaacatcttcaatggcacagac
ggcagtgaaaacgtgacggggctagacctgtctgacttccctgcgttagcagacaggagt
cggagggaaggaagcgcaaacccaacaccgctactcaacccactagctggaagggccccc
tatgttggcatggtgacgaagccatcgaacgagccgacgcaggatttctccatccacaac
gaggacttccctgcactgcctggtcccaactacaaggaccccacgttgagcaacgatgac
agcaaaacaaacctaaactctacaggcaagagcacgtccagtgcagacggtcctaaattc
cccggagacaagacgagctcagctcagaacaacagccagaagaaagggatccaggtgtta
cctgacgggcgggtgacgaacattcccgggggaatggtgacggaccagtttgggatgatt
ggcttgctgacgtttatccgagcagcggagacggacccgggcatggtgcacttggcactg
gggagtgacctcacaacgcttggactcaacctcaactctccagaaaacctgtaccccaag
tttgcctccccctgggcatcagcaccgtgtcgacctcaagacattgacttccacgtcccc
tctgagtacttaaccaacatccacataagggacaagctggcagctattaaactggcgcgg
tacggtgaagacctgctgttctatctgtactacatgaacggaggagacctgctacagctc
ctggcagcagtagagctctttaaccgggattggcggtaccacaaagaggagcgggtgtgg
atcacgcgggcgccgggcatggagcccacactaaagaccaacacctatgagagggggacc
tactacttctttgattgtcttaactggaggaaggtagccaaggagttccacctggagtac
gaaaagctagaagagaggccccacgtcccatctaccttcaactacaacccagctcagcag
gccttctga
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