Oncorhynchus kisutch (coho salmon): 109897825
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Entry
109897825 CDS
T09179
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oki04030
]
109897825
G protein-coupled receptors [BR:
oki04030
]
Rhodopsin family
Vision
Opsin
109897825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
TctB
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
109897825
NCBI-ProteinID:
XP_031652469
Ensembl:
ENSOKIG00005014066
LinkDB
All DBs
Position
LG1:complement(20949866..20952839)
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AA seq
403 aa
AA seq
DB search
MAGIKPHRLGYTILLVVNTTTGDQQDKTTEANHKTEKKRPTDTFSEMAESWGSAAYAARR
QNQDTTRESSFTFTNSNNTKDPFEGPNYHIAPRWVYNVSTLWMIIVVILSVFTNGLVLVA
TAKFKKLQHPLNWILVNLAIADIGETLLASTISVCNQFFGYFILGHPMCVFEGYTVSTCG
IAALWSLAVISWERWVVVCKPFGSVKFDAKWAMGGIIFSWVWAAFWCAPPIFGWSRYWPH
GLKTSCGPDVFGGNEDPGVKSYMITLMITCCFFPLFVIIFCYIFVWLAIRAVAAQQKDSE
STQKAEKEVSRMVVVMIIAYCVCWGPYTCFACFAAANPGYAFHPLAAAIPAYFAKSATIY
NPVIYVFMNKQFRTCIMQLFGKAEDDGTEVSTSKTEVSSVAPA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggctggtataaaaccccacagattggggtacaccatcttgttggttgttaacaccaca
acaggtgatcagcaagacaagacaacagaagccaaccacaagacagagaaaaagcgacca
acagatactttctcagaaatggcagaaagctggggaagtgctgcttatgcagccaggcga
caaaaccaagatacaacgagagaatcttcctttaccttcaccaacagcaataacaccaaa
gatccctttgagggccccaactaccacattgctccaagatgggtgtacaatgtttcaaca
ctttggatgatcattgtggtcatcctctcagtcttcaccaatggcctggtactggtggcc
actgcaaaattcaagaagctccaacaccctctgaactggatcttggtcaaccttgctatt
gctgacattggagaaacacttttggcaagcaccatcagcgtttgcaaccagttttttggc
tacttcattctgggacatccaatgtgtgtctttgagggatacactgtctccacttgcgga
attgctgctctgtggtccctggctgtcatctcttgggagagatgggtggtggtgtgcaag
ccctttggaagtgtcaagtttgatgccaaatgggccatgggaggcattatcttctcctgg
gtctgggctgctttctggtgtgccccccccatctttggctggagcaggtactggcctcac
ggcctgaagacttcctgcggacctgatgtgttcggaggcaatgaggatcctggagtcaag
tcctacatgattactctcatgattacatgctgcttcttccccctgttcgtgatcatcttc
tgctacattttcgtgtggctagccattcgtgctgttgctgcacagcagaaagactctgag
tcaacacagaaggccgagaaagaagtgtccaggatggttgttgtcatgattatagcttac
tgtgtatgctggggaccttatacctgctttgcctgctttgctgcggctaaccctgggtat
gctttccaccctctggcagccgcaattcctgcctactttgccaagagcgccaccatctac
aatccagttatatatgtcttcatgaacaaacagttccgtacttgcatcatgcagctcttt
ggaaaggcagaagatgatggcactgaagtgtctacatcaaaaacagaggtttcctctgtg
gcacctgcataa
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