Oncorhynchus kisutch (coho salmon): 109897833
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Entry
109897833 CDS
T09179
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oki03016
]
109897833
Enzymes [BR:
oki01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
109897833
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109897833
Prokaryotic type
109897833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
109897833
NCBI-ProteinID:
XP_020348022
Ensembl:
ENSOKIG00005004486
LinkDB
All DBs
Position
LG10:16779076..16790601
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AA seq
644 aa
AA seq
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MADAEPMLVPAPGGEKRACPALEDEVAHSTKRPRVQKDENNRGGHSHKPAQDEAEEPEGE
ETEPLEEEDGEGAGLGSGEAFAEMMKHGLTELDVGIQKFVSEHKGFSGILKERYSDFVVH
EVNKEGKTVQLDDLSVPEEAEEASVAEQPGSEVFTEEQKHQLEQLQLFKKKEGNVSIEMA
DDTKEKRTLVHKAVKTLYPGLETKTEEREGKKFIVAYHAAGQKALAAPRKHSWPKSRGAF
CHFVLYKENKDTMEAINVLSKFLRMRPNVFSYMGTKDKRAITVQEIAVLKVTAERLSQLN
KCLNNFKLGNFCYKKHPLKLGELRGNHFTVVIRNITGTDDQVQQAMTSLRETGFINYYGM
QRFGTTAVPTHQVGKAILQDNWNEVIDLILKPRPGAEKGYLVKCREEWAQSQDPEAALKK
LPVKRCVEGQLLRGLSMYGKKNIITAFAMIPRNNRLMYIHSYQSFMWNTMVSRRIEAFGL
KAVEGDLVLRGGTAFVLSAAEAETHSIQDVVMPLPGFDVIYPTHHVGKGYREKLSADNLD
IDNMRHRVRDYSLAGAYRRILIKPSDVSWEVINYDDPRISLVHTDVEKLEDQPPPVFNKE
GKYRALRMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTIWLN
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagagcccatgctggtccctgcccctgggggggagaaaagggcctgccct
gccttggaggatgaggtggcccacagcaccaagagacccagagtccagaaggatgagaac
aacagaggaggacactctcacaagccagcccaggatgaggcagaagaaccagagggggag
gagacagagccactggaagaggaggatggagaaggggccgggttaggttctggagaggct
tttgcagagatgatgaagcatgggctcacagagctggatgtggggattcagaaatttgtc
agtgaacacaagggcttctctgggatcctcaaggagaggtactctgactttgtcgtacat
gaggtcaacaaagaaggcaagacagtgcagttggatgatctctcggtccctgaggaggct
gaggaagccagtgtggcagagcagccagggtctgaggttttcacagaggagcagaaacac
caacttgagcagctgcagctcttcaagaaaaaagagggcaacgtgtccatagagatggcg
gatgacaccaaagagaaacggaccctggtccacaaagctgtcaagaccctgtaccctgga
ctggagaccaagacagaggagcgggagggaaagaagttcatcgtggcctaccacgcagcc
gggcagaaagcactcgcagcccccaggaaacactcctggcctaagagccgtggggccttc
tgccactttgtcctttacaaagagaacaaggacaccatggaggccatcaacgtgctgtcc
aagttcctcaggatgaggcctaatgtgttctcttacatggggaccaaggacaagagagcc
atcactgtgcaggagattgcagttctcaaggtcacagcagaaagactgtctcaacttaac
aagtgcctcaataacttcaagctgggaaacttctgctacaagaaacaccctctgaaactg
ggggaactacgtggaaatcatttcactgtggtcatcaggaacatcaccgggacagatgac
caggtccagcaggccatgacctccctcagagagacaggctttatcaactactacggcatg
cagcgctttggcaccactgccgtgcccacacaccaggttggcaaagccatcctgcaagac
aactggaatgaagtgatagatctgatcctgaagcctcgccctggagcggagaaaggttac
ctagtgaagtgtcgtgaggagtgggcccagtcccaggacccagaggcagcgcttaagaag
ctacctgtgaaacgctgtgtggagggacagctgctccgaggcctctccatgtacggcaag
aagaacatcatcactgcatttgccatgatccctcgtaacaaccgactgatgtacatccac
agctaccagagctttatgtggaacaccatggtcagcagacgcattgaggccttcgggctg
aaggctgtggagggagacctcgtgctcagaggaggcactgcgttcgtgctgtctgcagcc
gaggcagagactcactctattcaggacgtggtgatgcccctaccagggtttgatgtcatc
taccccactcaccacgtggggaagggctacagggagaagctgagtgcagataacctggac
attgacaacatgagacacagggtgagggactactctctggccggggcctaccgacgcatc
ctcatcaaacccagtgatgtcagctgggaggtgattaactatgatgaccctcgtatctct
ctggttcacactgatgtggagaaactagaggaccaacctcctccggtcttcaacaaagag
gggaagtacagggctttgaggatggagttctctctgcctccctccacctatgccaccatg
gccatcagagaggtgctcaagatggacaccagcatcaagaaccagacccagctcaacacc
atctggctcaactaa
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