Oncorhynchus kisutch (coho salmon): 109897892
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Entry
109897892 CDS
T09179
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00310
Lysine degradation
oki00514
Other types of O-glycan biosynthesis
oki01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109897892
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
109897892
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oki01003
]
109897892
Enzymes [BR:
oki01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
109897892
Glycosyltransferases [BR:
oki01003
]
O-Glycan biosynthesis
O-linked Gal type
109897892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
109897892
NCBI-ProteinID:
XP_020348129
Ensembl:
ENSOKIG00005033835
UniProt:
A0A8C7J7I0
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All DBs
Position
LG10:complement(20680264..20710704)
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AA seq
622 aa
AA seq
DB search
MMLGMMPAVGAVGVGLFCALLVAFMPGGMSDIATLVQDPVRPESSLLKPKIMIAILARNA
AHSLPHYLGCIDRLDYPKERIAIWAATDHSVDNSTAMLREWLKQAQDQYHYVEWRPMEQP
KSYTDEWGPKHWPPSRFNHVMKLRQAALKAARERWADYILFADSDNLLTNPRILNLLMAE
NLTLVAPMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFAVPMVHSTFLLDLR
RDASRELAFYPPHPDYSWAFDDIMVFSFSARQADVQMYVCNREHYGFLPVPLKASQNVDE
EKESFTHTIAEAMIDHNIAPSEYLYNPQMPQDKMGFDEIFLINLKRRLDRRQRMLSTMTS
LGLQATLTDAVDGKALNTSQLQALGIEMIPGYQDPYSGRVLTRGEIGCFLSHHSAWVQLV
ERGLSKVLVLEDDVRFEPRFKRRMMTIMEEVEKAQLDWDLIYVGRKRMQVRQPERSVEGV
NNLVEADYSYWTLGYALSAQGARKLLAAQAFSKMLPVDEFLPVMFNKHPNSDFMSHFEPR
DLKAFSVEPLLLYPTHYTGEPGYVSDTETSTIWDDEATATDWDRQHQHARKTEQQGRIHT
VAQNSVTGDSPPPAARSTRDEL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgggaatgatgcctgcggttggagccgtgggagtcgggctgttctgcgctcta
cttgtcgccttcatgcccggtggcatgtcagacatagcgactctggtgcaggacccggtc
cgacccgaatcgtccctgctgaagccaaaaatcatgatcgccattctggctcgcaacgcg
gcgcacagcctgccgcactacctgggctgcatcgacaggctagactacccgaaggagcgg
atcgctatatgggcagcgacagaccacagtgtggacaacagcacagccatgctgagggag
tggctgaagcaggcccaggaccagtaccactatgtggagtggagacccatggagcagccc
aagtcctatactgatgagtgggggcccaagcactggcctccgtcccgcttcaaccatgtg
atgaagctgaggcaggctgctctgaaggcagcacgggaacgctgggcagattatatactg
tttgcagacagtgataacctgctgaccaaccccaggatcctgaacctactcatggctgag
aacctgactctggtggcccccatgctggagtctcgctctctctactccaacttctggtgt
ggcatcactccccagggttactataagcgtactccagactaccagccaatcagggagtgg
aagcgtctgggttgcttcgccgtacccatggtgcactctaccttcctgttagacctgagg
cgtgacgccagtcgggagctggccttctacccccctcaccctgactacagctgggccttc
gatgacatcatggtattctccttctccgcccgacaggcagatgtccagatgtatgtgtgt
aacagagaacactatggcttcctgcccgttcctctgaaggcctcacagaatgttgacgag
gagaaggagagcttcacacacactatcgctgaggccatgattgaccacaacatagcgccc
tcagagtacttgtacaatccccagatgccgcaggacaagatgggctttgatgagatcttc
ctgatcaatctgaaacgtcgtctggacaggagacagagaatgttgagcaccatgacctct
ctgggtctgcaggccacccttactgacgcagtggatggcaaggctctgaacacttctcaa
ctgcaggcgttaggtatagagatgattccaggttatcaggacccatactctggccgtgtt
ctaaccagaggagagataggctgcttcctcagccaccactccgcctgggtacagttggtg
gagcgtggtctttccaaggtgctggtgttggaggatgatgtgaggtttgagcccagattt
aagaggcgaatgatgaccatcatggaggaagtagagaaggcccagctggactgggatctc
atctatgtggggcgtaagcgtatgcaagtgcgtcagccagagcgttcagtggaaggggtt
aataacctggtggaggcggactactcatattggacgctgggctatgctctgtcagcgcag
ggtgccaggaagctgctggctgctcaggccttcagcaagatgctacctgttgatgagttc
ctccccgtcatgttcaacaaacaccccaattctgacttcatgtctcactttgagcctcgg
gacctgaaggccttctccgtggaacccctcctcctctaccccacccactacacgggcgag
ccaggctacgtcagcgacacagagacctccaccatctgggacgacgaggccaccgccacc
gactgggaccgccagcaccagcatgccaggaagacagaacagcaaggccgcatccacacc
gtggcccagaacagtgtgacgggagactcacctccacccgctgcccgctccacacgagac
gaactctga
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