Oncorhynchus kisutch (coho salmon): 109897894
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Entry
109897894 CDS
T09179
Name
(RefSeq) neurogenic locus notch homolog protein 2-like isoform X1
KO
K20994
Notch 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109897894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_3
EGF_Teneurin
EGF_DL_JAG
JAG1-like_EGF2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
109897894
NCBI-ProteinID:
XP_020348134
Ensembl:
ENSOKIG00005036482
LinkDB
All DBs
Position
LG10:20832374..20888067
Genome browser
AA seq
2495 aa
AA seq
DB search
MGQLPVFSSGKVLVIVVCCVRLSLALQCLDAVKPCVNNATCATFTNGTGYCRCAAGFLGD
YCHHKDPCHPGYCLNGGNCSVAVSGIPGSPTCSCPLGYTGQHCQTPQNSTCYPNNPCANQ
GVCTLLSLDKYKCQCAHGWTGMRCNREDRCLSGPCANGGTCSSLSGGKFSCTCPPGYWGP
RCLNDTDECAASAPVCQNQGACVNTPGSYRCNCAPGFTGRQCETPYIPCSPSPCLNGGTC
RPTSETSYWCHCLPGFNGTNCENNIDDCPDHQCRNGGTCMDGVNTYNCQCPPEWTGQFCT
EDVDECRLQPNTCQNGGTCSNIQGSYTCVCVNGWSGLDCSENIDDCATAACTNGSTCIDR
VASFLCVCPYGKTGLLCHVNDACISSPCRDGAQCDTNPINGMFNCNCAPGYIGSTCNDDI
NECIIGFPSGPNPCEHGGSCVNTDGSFTCNCARGYGGPRCETDINECASSPCQNDGTCLD
RIGDYSCICMEGFEGTHCEIDINECASSPCLNQGTCLDQVKRYVCQCPLGFSGEMCQIDI
DECSSTPCLNGAKCIDRPNGYECECAEGFSGLLCNENIDDCDPEPCHHGVCRDGIATFSC
DCDPGYTGSICNVQFMECHSNPCQNRGRCIDLVNKYQCNCLPGTSGVNCEFNVDDCASNP
CEYGECQDGINEYKCVCAPGYTGAKCDVDIHECNSSPCMSGGTCVDKVNGFICQCPPGTH
GPLCHSGTNHCAPQPCVHGDCVEQQSGYNCECDSGWVGQHCDQEKDECQSSPCQYSSTCV
DRLNGYSCQCRPGFTGVNCEFNMEECASSPCENHGTCVDGVNTYSCLCDPPYSGKHCEEE
LVPCASHPCERGGVCQPTPDYTFYTCRCPSGWQGPRCTEDVDECRKNPCQNRARCINSQG
SYVCKCRPGYSGLNCQTNIDDCSPHPCLNGGSCVDEVGGFSCDCRQGFDGERCEAEVDEC
ASQPCQNGAVCRDYVNSFVCVCRPGFDGILCEHNIPECTESSCLNNGTCVDDINTFSCRC
RPGFYGTFCEYEQNECDSQPCKHGGTCTDGLGSYRCTCPVGYNGQNCQNFVNLCSQPLCQ
NGGSCSQSETTWLCHCPVGWTGMYCDVPNLSCQDYAARNGIQVELVCKHSGRCVNVGKAH
QCQCLPGYTGSYCNEMVDECLSNPCRNGATCMDYQGTYECMCKAGYQGVNCEYDVDECHS
NPCHHGGTCINLINRFSCACPPGTNGVQCEVNVDDCAPKPGSWELRCLNGGQCVDGVGRY
TCSCPPGFAGEHCEGDVNECLSGPCQSPGSLDCVQLANDYQCRCRLGYTGRRCESMVDLC
QSKPCHNSGTCSMNMSSVHGYTCICQPGFTGFNCGEVEGYNCAKLRCQNGGQCQESQVGR
PHCRCQPGFSGPRCETVHSCQNRPCLNGGTCMKDPLYQYSCHCPAHFSGRHCENVIFDPS
SSTPASCPYVECEQHSGDKVCDPQCNSHECQWDGGDCSLHWRQPWVNCTAPVPCWELFRN
GRCDPECDNSGCLFDSFECQESAQSYCKYDKYCAAHYANKICDKGCNTEACGWDGLDCSG
DTPAVVADGTLVIVVLLQPEELMGDMRGFLRSLGTLLHTNLRVKMDDQQKPMLYPYYGLE
HDDANGGQPSTMKLRGKRELDKEVVGSKVYLEIDNRKCSERSMDCFSSTELAASFIAAEY
LKSELPYPVVSVNSDPTEPHKPPILLYLAVGAAVIILLILVLGVLAAKRKRKHGVLWLPD
GFLAKKDDKRREPVGQDDFGMKNFKTQDGGMIDGGQRWMEEEAPPKKVRTEDKPLLPMGV
DGGVDRREWTLQHHKAADISLTPPQTDLEADCLDVNVKGPDGFTPLMLASLRNGGASDCG
LQAEEEEEESGGDEPGPNAISDLITQGATVMAQTDRTGETALHLAARYARADAAKRLLDA
GADANAHDNMGRTPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGM
VEELVHCHADINAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEQTPLFLAAR
EGSFEAAQVLLDHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMG
GGHSSLVCGGNGAGYMGMRPGPQGKKSRRGGAKVGGVGGATAKELKDMKAKRRKKPTGGE
GPAVGGASGNGTKAAGGLSESSVTMSPVDSLESPHSYIGDAAGASKTTNSPLLGSPSSRP
LLPPVSHMLGQQQSWVGLKHGYGGHMFNLLPQQMGSGHPSMSQHHGQGLLTPMNVTMSRE
QLPPIVTFQMMTPGGGQALLKQPQPGQVQSQGQNLGQNQGQPQSQQGPTHLHCTQGMLYQ
MPNMSLQHSLSHSLPHPHSHGLAHGHGMVQDGQSRQQLPPYQAMQSPVDKYPTPPSQHSY
ATAGSDGTTPGYPAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNPHAL
PPLRHTHIPEQLQPQSQQTQQNPQQPQRGNMQVFA
NT seq
7488 nt
NT seq
+upstream
nt +downstream
nt
atgggccaattacccgttttctcttcgggcaaagtattagtcatcgtcgtctgctgtgtt
cgactttctttggctctccagtgtctggatgctgttaagccgtgtgtcaacaatgctaca
tgtgccaccttcaccaacgggacaggatactgcaggtgtgccgcaggtttcctgggtgat
tactgccatcacaaagacccgtgtcaccctggttactgtctgaatggggggaattgctct
gtggctgtgtcgggcatcccgggcagccctacctgctcctgtcccctgggctacactggg
cagcactgccagaccccccagaactccacctgctaccccaacaacccatgtgccaaccaa
ggagtctgcaccctgctctccctcgacaagtacaagtgccagtgtgcccacggatggaca
ggcatgcgctgtaatcgtgaggacagatgtctgtcaggaccctgtgctaatggaggcacc
tgcagctctctgtctgggggcaagttcagctgtacctgtcctccaggttactggggtcct
cgctgcctcaacgacactgacgagtgtgctgcttctgccccggtgtgtcagaaccaaggg
gcgtgtgtcaacacccccggctcctacaggtgtaactgcgcccccgggttcactggccgc
caatgtgagactccctacatcccctgctccccctcgccctgcctcaacgggggcacgtgt
cgcccaacctctgagaccagctactggtgccactgcctgccaggcttcaatggtactaac
tgtgagaacaacattgacgactgccccgaccatcaatgccgaaatggagggacctgcatg
gacggtgtcaatacttacaactgccaatgccccccagaatggactggtcagttctgtact
gaggatgtagatgagtgtcgcctgcagcccaacacatgtcagaacggggggacctgcagc
aacatccagggcagctacacctgtgtatgtgtcaacggctggagtggcctggactgctct
gagaacatagatgactgtgctacggctgcctgcaccaatggctccacctgtattgaccgt
gtggcatccttcctttgtgtctgcccctatggaaaaacaggtttgctctgccacgtgaac
gatgcctgcattagtagcccgtgccgggacggggcgcagtgtgacaccaaccccatcaac
ggcatgttcaactgcaactgtgccccaggctacataggaagcacctgcaatgacgacatc
aatgagtgcatcataggcttcccctcaggtccaaacccctgtgagcatggaggatcgtgt
gtgaacacagatggctcgttcacatgtaactgtgcgagaggttatggtgggccgcgctgt
gagacagacatcaatgagtgtgcgtccagcccctgccagaatgacggcacctgtctggac
cgcataggagactacagctgcatctgtatggaaggatttgagggaacacactgtgagatt
gacatcaacgagtgtgccagctctccatgtctgaaccaagggacctgtctggatcaagtc
aaacgctacgtctgccagtgccctctaggattcagtggggagatgtgtcagatcgacatt
gacgagtgttccagcacaccatgtctcaacggggctaagtgtatcgaccgtcccaacggc
tacgagtgtgaatgtgctgaaggcttctcggggctgttgtgtaatgagaacatagatgac
tgtgacccagagccttgtcaccacggggtttgtcgtgatggcatcgcaaccttctcctgt
gactgtgacccgggctacaccggctctatctgcaacgtccagttcatggagtgccacagc
aacccctgccagaaccgtggacgctgcatcgacctggtcaacaagtaccagtgcaactgt
ctgcctggcacctcgggggtgaactgtgagttcaatgttgacgactgtgccagtaacccc
tgtgaatacggagagtgccaggacgggatcaatgagtacaagtgtgtctgtgctccagga
tacacaggtgcaaaatgtgatgtggacatccatgagtgtaattccagcccgtgtatgagt
gggggtacgtgtgtggacaaggtaaacggcttcatctgccagtgtccccctggcacccac
ggccccttgtgccactctggcaccaaccactgtgccccccagccctgtgtacacggagac
tgtgtagagcagcagagcgggtacaactgtgagtgtgattctggctgggtggggcagcac
tgtgaccaggagaaggatgagtgccagtccagcccctgccagtacagcagcacctgtgtg
gacagactcaacggatactcttgccagtgtcgtcccggattcacaggtgtgaactgcgag
ttcaacatggaggagtgtgcatcaagcccgtgtgagaaccatggtacctgtgtggatgga
gtcaacacctacagctgcctgtgtgatcctccatactccggaaaacactgtgaggaggag
ttggttccctgtgcgtctcatccatgtgagaggggaggtgtgtgtcagccaaccccagac
tacaccttttacacctgtcgatgtcccagtggctggcaaggcccccgctgcactgaggat
gtggatgagtgcaggaagaacccatgtcagaacagggcccgttgcatcaacagccagggc
agctacgtgtgcaagtgtcgaccaggctacagcggtctcaactgccagaccaacatcgat
gactgctccccccacccgtgtctgaacggcggttcctgtgtggacgaagtgggagggttc
tcctgtgactgccggcaagggtttgatggtgagcggtgtgaggcagaagtggacgagtgt
gccagtcagccgtgtcagaatggagctgtgtgccgggactacgtcaacagctttgtctgt
gtgtgccggccaggtttcgatggaatcctctgtgaacacaacatcccagaatgcactgag
agttcctgtctgaataacgggacctgtgttgatgacatcaacacattctcgtgtcgttgt
cgtcctggcttctacggcaccttctgtgagtatgagcagaatgagtgtgactctcagccc
tgcaagcacggaggaacctgcactgacggtctgggctcctaccgctgcacctgccctgtg
ggctacaatggacagaactgccagaactttgtgaacctgtgtagccagccactgtgccaa
aatggagggtcttgttcccagtcagagaccacctggttgtgtcactgtcctgtggggtgg
actggcatgtactgtgatgtccccaacttgtcctgtcaggactatgctgctcggaacggt
atccaagtggagttagtgtgcaagcactcgggtcgctgcgtgaacgtgggtaaggcccac
cagtgtcagtgcttgcctggttacacgggcagctactgtaacgagatggtggatgagtgc
ctttccaacccctgccgcaacggggccacctgcatggactaccagggcacatatgagtgt
atgtgcaaggctggctaccagggggtgaactgtgaatatgatgtggatgagtgtcactct
aatccttgtcaccacggaggaacctgcatcaacctcataaaccgcttttcctgcgcctgc
ccacctggcactaatggtgttcagtgtgaggtgaatgtggacgactgtgctcccaagcct
ggctcctgggagcttcgctgtctgaatgggggccagtgtgtagacggggtgggacgctac
acctgctcctgcccccctggcttcgctggggaacactgtgagggggacgtcaacgagtgt
ctctctggtccctgccagtctcctggcagcctggactgtgtacagctggccaatgactac
cagtgccgctgtcgcttgggctacacaggacgccgctgtgagtccatggtggacctgtgc
cagtcgaagccgtgccataacagtggcacctgctccatgaacatgagctcagtgcatgga
tacacatgcatctgtcaaccaggcttcactggcttcaactgtggagaggtggagggctac
aactgtgccaagctgcgttgccagaacggcgggcaatgccaggagtctcaggttggtcgt
ccgcactgccgttgccagccaggcttcagtgggccccgctgcgagaccgtccacagctgc
cagaaccggccctgtctgaacggaggcacctgtatgaaggacccactctaccagtacagc
tgtcactgcccagcccacttctcaggcaggcactgtgagaatgtcatcttcgatccgtct
tccagcacccccgcctcctgcccctacgtagagtgtgagcagcattctggggataaggtg
tgtgacccgcagtgcaacagccatgagtgccaatgggacggaggagactgttctctacat
tggcgccagccatgggtcaactgcaccgccccggtgccctgctgggagctgttccgcaac
ggccgatgtgaccccgagtgtgacaactctggctgcctcttcgacagcttcgagtgtcag
gagagcgcacagtcttactgcaagtatgataagtactgtgcggctcactatgccaacaag
atctgtgataagggctgtaacacggaggcatgtggctgggacggcctggactgctctgga
gacacccctgctgtggtggctgacggaacgctggtgatcgtagtgttactgcagcctgag
gagctaatgggagacatgagaggcttcctgcgctccctgggaaccctgctgcacaccaac
ctccgtgtcaagatggacgaccagcagaaacctatgttgtatccgtactacggcctcgag
cacgacgacgccaatggaggacagccttctaccatgaagcttagaggcaaacgggagcta
gacaaggaggttgtcgggtctaaggtgtacctggagatcgataaccgtaagtgttctgag
cgctccatggactgcttctccagcacagagctggctgcatccttcatcgctgctgagtac
ttgaaatctgagctgccctaccctgtggtctctgtcaacagtgatcctacggaaccccat
aagccccccatcctgctctacctggctgtgggagcagccgtcatcatcctgctcatcttg
gtactgggcgtgctggccgccaagaggaaacgcaaacatggcgtcctctggctccccgat
ggcttcctggccaagaaggatgacaagaggcgagaacccgtgggccaggacgacttcggc
atgaagaacttcaagacccaggatggagggatgatagatggaggccagaggtggatggaa
gaggaggctccgccaaagaaagtaaggactgaggacaagcccctgctgcccatgggtgtg
gatggaggagtggacagacgggagtggaccctgcagcaccacaaggctgctgacatctct
ctcactccaccacagactgatctggaggcagactgcctggatgtcaatgtcaaaggacca
gatggtttcacccccctgatgctggcctctctacgaaacggaggggcatctgattgcggc
ctgcaggcggaggaggaggaggaagagagcgggggagatgagccgggacccaacgccatc
tcagacctcatcacccagggtgcaacagtcatggcccagacagaccgcaccggggagacg
gcactccacctggctgctcgctacgcccgggccgacgccgccaagaggctgctggacgct
ggggcagacgccaacgctcacgacaacatgggtcgcacccctctccacgctgctgtggca
gccgatgcccagggagtgttccagatcctgatccgtaaccgggccacggagttggatgcc
aggatgaatgatggcaccacacctctgatcctggctgccaggctggctgtggaaggcatg
gtggaggaactggtacattgccacgctgacatcaacgctgtcgacgaccacggtaaatct
gctctgcactgggcagctgctgtgaacaatgtggaggccactctggtgctgctgaagaat
ggagccaacagagacatgcaggacaacaaggagcagaccccgttgttcctggcagccaga
gagggtagttttgaggcagcccaggttctgctggaccactactctaatagggacatcaca
gaccacctggaccggctgccccgcgacaccgcacaggagcgcatgcaccatgacatcgta
cgtctgcttgaccagtacaacctggtccacagccctcacaatggccccaaccacatgggc
gggggacactcttccttggtctgtggaggcaatggcgctggctacatgggcatgcgcccc
ggaccccagggcaagaagagcaggcgcggcggggcaaaggttggaggggtgggtggggct
acagcaaaagagctgaaagacatgaaggccaagcggagaaagaagccaacgggaggagaa
gggcctgcagtgggaggagccagtggcaacggcactaaagctgcaggagggctgtcggag
agctcagtcaccatgtcccctgtcgactccctggagtctccacactcatacataggagat
gctgccggggcctccaaaacgaccaactctcctctcctgggcagcccctcctcaaggccc
ctgctgcccccagtcagccacatgctgggccagcagcagagttgggtgggcctgaagcat
ggctacggtggccacatgttcaacctcctcccccagcagatgggcagtggccaccctagc
atgtcccagcaccacggccaaggcctgctcacccctatgaatgtcaccatgagccgcgag
cagctgcctcccattgttaccttccagatgatgacgccaggaggcgggcaggccctgctg
aagcagccccagcctgggcaggtgcagtcccaggggcaaaacctgggccaaaaccagggc
cagccccaatctcagcagggccctactcacctccactgcacccagggcatgttgtaccag
atgcccaacatgagcctccagcacagcctgtctcacagcctccctcacccccactcccat
ggcctggcccacggccacggcatggtgcaggatggccagtcccgccaacagctccctccc
tatcaggctatgcagagccccgtggataagtacccaacccctccttctcagcacagctac
gctactgctggctcagatggcaccaccccagggtatccggctcacccgcccagcgagcac
ccttacctcaccccctcccctgagtcccctgacccctggtcctcatcctccccccactcc
aactcagactggtctgacgtcaccaccagccccacccccctggggaacccccatgcactg
ccgcctctccgccacacacacattccggagcagctgcagccgcagtcccagcagacacaa
cagaacccccagcagcctcagcgtggcaacatgcaggtgtttgcatag
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