Oncorhynchus kisutch (coho salmon): 109897899
Help
Entry
109897899 CDS
T09179
Name
(RefSeq) CXXC-type zinc finger protein 1 isoform X1
KO
K14960
COMPASS component SPP1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109897899
03036 Chromosome and associated proteins [BR:
oki03036
]
109897899
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
109897899
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
109897899
COMPASS/SET1 complex (yeast)
109897899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
109897899
NCBI-ProteinID:
XP_020348144
Ensembl:
ENSOKIG00005013660
LinkDB
All DBs
Position
LG1:complement(20841919..20847781)
Genome browser
AA seq
571 aa
AA seq
DB search
MDSEVSDFEPAPGLESSMEGENAPVYCICRKPDINCFMIGCDNCNEWFHGNCINLTEKMA
KAIRQWYCLRCRDKNPSLEIKYRPKKSREKEAEGQREPERKFERQNSTPDYKSERRRGSK
VKRSARMCGECEPCLRTEDCATCDFCKDMKKFGGPNKIRQKCRFRQCDVRARKMLRVKDE
EFNLRERRDNSYHRRRRYSDDYDSEAELYEKYKAAGYDDNMPWLSDEDDGPPFSPVLRKK
AVKVKHVKRRENKFDKKKESRRHKQKQKHKDKVRHSDRGDARDGGGQRQCLGPSCVEAAR
ANSKYCSEECGMKLATNRLYEILPQRIQQWQQSPCIAEEQGKKQLERIRRDQQNARMRLT
DMEKRFHELEGIIAKAKQQVVQQDEETNEGDNEETDLMIFCVSCSHPINPKVALRHMERC
YAKYESQTSFGSMYPTKIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPGDEVCG
CPLVRNVFEATGEYCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFEQERNVRTA
MTNRAGLLALMLHQTIQHDPLTTDLRCNKDR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgaagtgtcagactttgagcctgcaccagggcttgagagcagtatggagggc
gagaatgcaccagtgtactgcatttgtcgaaaacctgacatcaattgcttcatgattggt
tgtgacaactgtaatgagtggtttcatggtaattgcatcaatctcacagagaagatggcc
aaagctatcaggcagtggtactgcctgcgatgccgagacaaaaacccatcattggagata
aaataccgtccaaagaagagccgtgaaaaggaggcagagggccagagagagccagagaga
aaatttgaaagacaaaacagcactccagattataaatctgaaaggcgccgtggatcaaag
gttaagcgctctgctcgtatgtgtggagagtgcgagccctgcttgaggactgaggactgc
gccacatgtgacttctgcaaggacatgaagaaatttgggggtcccaacaaaataagacag
aagtgtcgatttaggcagtgtgacgtccgagccaggaaaatgttgcgtgtgaaggatgaa
gagtttaatttgcgtgaaaggcgggataattcctaccaccggagaagacgatactcagac
gactacgatagtgaggcagaactctatgaaaagtacaaggcagcgggatatgacgacaac
atgccatggctcagtgatgaggatgacgggcctccattcagccctgtcctgcgaaagaaa
gctgtgaaggtcaagcatgtgaagagacgggaaaataaatttgacaagaaaaaagagtca
cggcggcacaaacagaaacagaagcacaaggacaaagtcaggcacagtgataggggcgat
gccagggatggaggagggcagcgacagtgcctcgggcccagctgtgtggaagctgcacga
gccaactcaaaatactgctcagaagaatgtggcatgaagctggctaccaaccggctctat
gagatactccctcaacgtatccagcagtggcagcagagcccctgcatcgctgaggagcag
ggcaagaagcaactggagcggatccgaagggatcagcagaatgcacgcatgcgtctcact
gacatggagaaacgcttccacgagctggagggaatcattgctaaggccaagcagcaggta
gtccagcaggatgaggagacaaatgaaggggacaatgaagaaacagacctgatgattttc
tgtgtgtcctgcagtcaccctatcaacccaaaggtggcactgcgacatatggagagatgc
tatgctaagtatgagagccagacatcttttggttcaatgtacccaacaaagatcgaagga
gcaacaagactcttctgcgatgtgtacaacccccagagcaaaacctactgcaagaggctt
caggttttgtgcccagaacattccagggacccaaaggtcccaggggatgaggtgtgcggc
tgtcctctggttcgtaatgtgtttgaggcaacaggcgaatactgcagggtttctaaacgc
aaatgtaataagcactacaactgggagaagctcaggagagctgaggtggacctggagcgt
gtcagagtgtggtacaagctggatgagctctttgagcaggagcgcaacgtcaggactgct
atgaccaacagggcaggtctacttgctctcatgctgcaccaaaccattcagcacgacccc
ctgacaacggatctccgttgcaacaaggacagatag
DBGET
integrated database retrieval system
