Oncorhynchus kisutch (coho salmon): 109897902
Help
Entry
109897902 CDS
T09179
Name
(RefSeq) DNA-binding protein RFX2-like isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109897902
Transcription factors [BR:
oki03000
]
Eukaryotic type
Other basic domains
RF-X
109897902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
Pox_D5
Motif
Other DBs
NCBI-GeneID:
109897902
NCBI-ProteinID:
XP_020348142
Ensembl:
ENSOKIG00005038974
LinkDB
All DBs
Position
LG10:complement(21299494..21362799)
Genome browser
AA seq
732 aa
AA seq
DB search
MQSSDGGSDSPSSVVLRTSTSTQAPVVQPVPASQQRVLVQATGSAQKGAQVQQLSVPRVQ
QVPQQVQQVQHVYPSQVQYVGEGGEAVYTNGTIRTAYSYNPEAQLYGQGSGGAYFDSQGG
GAQVTTVVSSAGGGPPHSMVGIAMDVGGSQVISGGGTYLIHGGGMDGGRHHASHSSRSSS
AMLEMAIENLQKSEGIATHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEQK
LDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDSQYMAMRQ
QPMHQKQRFKPLQKVDGMGDSLSGGSQHSASTPEQSVAAQSQHHQQYIDVSHVLPPFPTP
DLGTQPLPERINMNDVKKLQNLYRDHCEATLDVVMNLQFHYIEKLWQTFWYSTAPSSDVT
TTIPNSDEDMEGVIPREKLMALCKYEPVKLWMRSCDHILYQALVEILIPDVLRPVPSTLT
QAIRNFAKSLEGWLTTAMSDFPNEIVRTKAAVVSAFAQTLRRYTSLNHLAQAARAVLQNT
SQINQMLSDLNRVDFANVQEQASWVCQCDETVVQRLEQDFKVTLQQQSSLDQWAAWLDNV
VNQVLKPHEGSTSFPRAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFY
LVEHRVAQATGETPIAVMGEFSDLNSMLPMLMDKDPSFSDDMSDMGSDEGRGPNEPIVKR
ERIEINHSLQEI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcagatggagggtccgattcgccgtccagtgtggtgctgcgtacgtccacc
tccacccaggcccccgtggtgcagcccgtcccagcctcacaacagagggtgctggttcag
gccacaggttcggcccagaagggagcgcaggtgcagcagctgtcagttcctcgggtgcaa
caggtccctcagcaggttcagcaggtccagcatgtttacccctcccaggttcaatatgta
ggagaggggggagaggcagtttacactaatggaaccatccggacagcctactcctataac
cctgaggcccagctgtatgggcaaggtagtggaggagcctactttgactctcagggtggg
ggtgcccaggtcaccacggtggtctcctcggccggcggcgggccgccccacagtatggtg
ggcatcgccatggatgtgggcggtagtcaggtcatctccggtggcggcacctacctgatc
cacggcgggggcatggatgggggtcgccaccacgcctcacactcttcccgctcctcctct
gctatgcttgaaatggcgattgaaaacctccaaaagtctgaagggattgcaactcacaaa
agcagcctgctcaacagccatctgcagtggctgctggataactatgagacagcggagggg
gtgagcctgccccggagctccctctacaaccactacctgcgccattgtcaggagcagaaa
ctggaccctgtcaacgctgcctcctttgggaaactcatccgctccgtcttcatgggcctc
aggacccgccgcctcggcactaggggcaactccaagtaccactactatggcatcagactg
aagccagactcaccactcaacagacttcaagaggactctcagtacatggccatgagacag
caacccatgcaccagaaacaaaggttcaagcccctccagaaggtagatggcatgggagac
agcctgtcaggaggctcccagcactcagccagcaccccagagcagtctgtggcagcccag
agccagcaccaccagcagtacattgatgtgtcacatgtcctgcccccgttccccacccct
gacctgggcacccagcccctccccgagcgtatcaacatgaatgacgtgaagaagctgcag
aacctgtacagggaccactgtgaggctactctggatgtggtgatgaacctccagttccac
tacattgagaagctgtggcagaccttctggtattcaacagcgccatctagtgacgtaacc
accaccatccccaacagtgatgaggacatggagggggtgatccccagggagaagctgatg
gctctgtgcaagtatgagcctgtcaagctgtggatgaggagctgtgaccatatcctgtac
caggccctggtggagatcctcatccctgacgtgctacgccctgtccccagtactctcact
caggccattcgcaactttgccaagagtctggagggctggctgaccacagccatgagcgac
tttcccaatgagattgtacgcaccaaggcagcggtggtgagtgcatttgctcagaccttg
cgtcggtacacctctctgaaccacttggcccaggcggcccgcgccgtgctgcagaacacc
tcccagatcaatcagatgctcagcgacctcaaccgcgtcgacttcgccaacgtacaggag
caggcgtcatgggtatgccagtgtgacgagactgtagtccagcggctggagcaggacttc
aaggtgaccttgcagcagcagagctctctggaccagtgggccgcctggctggacaacgtg
gtcaaccaggtcctcaagccccacgagggcagcaccagcttccccagggctgcaagacag
ttcctgctgaagtggtccttctacagctccatggtgatcagggacctgaccctgcgtagt
gccgctagttttggctccttccatctcatcaggctgctctacgacgagtacatgttctac
ctggtggagcaccgcgtcgcccaggcaaccggagagacgcccatcgctgtcatgggagag
ttcagtgacctaaactcaatgttgcccatgctcatggataaagacccgtccttctcagac
gacatgagtgacatgggcagtgacgagggccgggggcccaacgaaccgatcgtgaaaagg
gagaggatcgaaatcaaccactcgctgcaggagatctga
DBGET
integrated database retrieval system
