Oncorhynchus kisutch (coho salmon): 109897935
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Entry
109897935 CDS
T09179
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109897935
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109897935
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109897935
NCBI-ProteinID:
XP_020348207
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Position
LG10:22851514..22853527
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AA seq
315 aa
AA seq
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MYNMMETELKPTAPQTNSGVTGNSNASGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNAMGAGVGVGGGLGGGVNQRMDSYAHMNGWTNGGYGMMQEQLGYGQH
PGLNAHNTAQMQQMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQSTPGMTLGSMGSV
IKSESSCSPPIVTSSSHSRGAPCQTGDLRDMISMYLPGAEVPEQTAQSRLHMSQHYQSAP
VPGTTINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaactgaactgaaaccaaccgcacctcagacaaattctggggtt
acggggaattcaaatgcatctggaaacaaccagaaaaacagtccggaccgagtcaagaga
cccatgaatgccttcatggtttggtcgaggggacaacgaagaaagatggcacaggaaaac
cccaaaatgcacaattcggaaataagcaaaagacttggggccgagtggaagcttctatcc
gagagcgaaaagcgacctttcattgacgaagcgaagcgtctccgggctctccacatgaag
gaacatccggattacaaatacagaccccggaggaaaaccaagaccctgatgaagaaggac
aagtatacactgccaggtggacttcttgcgccaggcggcaatgccatgggcgctggagtg
ggtgtagggggaggcttgggtggtggggttaatcaaaggatggacagttacgcacatatg
aacggctggaccaatggaggttatggcatgatgcaggagcagcttggttatgggcagcac
cctggtttaaacgctcacaacaccgcgcagatgcagcaaatgcaccgctatgacatgagc
gcacttcagtacaactccatgacaaactcccagacctacatgaacggatcacccacgtat
agcatgtcatactcacagcagagcactcctggaatgactctgggctccatgggttcggtg
atcaagtcagagtccagttgtagtccccccatagtcacgtcttcgtctcactcaaggggt
gctccgtgtcagactggagacctacgggacatgatcagtatgtacttaccgggtgctgag
gtgccggagcaaactgcccaaagcagactccatatgtcccaacattaccagagcgcacct
gtaccaggcacgacgattaatggcacactcccattatcacatatgtaa
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