Oncorhynchus kisutch (coho salmon): 109897937
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Entry
109897937 CDS
T09179
Name
(RefSeq) leucine-rich repeat-containing protein 7-like isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109897937
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
109897937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_6
PDZ_2
LRR_5
LRR_At5g56370
LRR_NXF1-5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
109897937
NCBI-ProteinID:
XP_031689198
Ensembl:
ENSOKIG00005045795
LinkDB
All DBs
Position
LG10:complement(23073431..23202768)
Genome browser
AA seq
1570 aa
AA seq
DB search
MDNYSHLQLQCLEMTTKRKIIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLRELDISKNGIQEF
PDNIKCCKCLSVVEASVNPIAKLPEGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILE
LRENHLKTMPKSIHRLSQLERLDLGSNEFTELPEVLEQIHNLKELWMDNNSLQTIPGCIG
KLRHLRYLDLAKNRIESLDTDISGCESLEDLLLSSNMLQHLPDTIGMLKKLTTLKVDDNQ
LTSLPNTIGSGRAKLGLSLLEEFDCSCNELESLPPTIGYLHNLRTFSADENFLVELPREI
GNCKNVTVMSLRSNKLEFLPDEIGQMTKLHVLNLSDNRLKNLPFTFTKLKDLAALWLSDN
QSKALIPLQTEAHPETKQRVLTNYMFPQQPRHDEDYQSDSDSFNPTLWEEQRQQRMTVAF
EFEEKKEEEDNSGKVKVEINLKRYPTPYPEDLKNMVKSVQNMVGKNQHPLSTNCSGTNME
SRKQEQYEPPWPMPPKEVMEREMKEREREFNKTQMTEQGVIHNSAIDIPKRKDKEDLTES
SEDSMGGSPNDIRISDMRPTLVEPPMYKPKVVLLGKDKKESIDESDPDKMHCLNNSGSSA
TYSDYSPSQGSSGSSNPPGNGSTLQAAGKDGGVPQQHWTNRLAQQFPKPIETKPLLSQRD
PRETPPSSTLQQRSERRPLSDTFDQWNDSSHYDNTGFVSEEAPLETPSGSSSGNPMLGSK
SCSSSTSHGGRRPLMRQERIVGIPLELQDAPHQHPSHQFHNVRNMPETEVSQPPPPNPWQ
NWTRTPSPFEDRTAFPSKLSSPGNSPNPDRNDFEQEMHHGELPGTFPSTGTWGYLDSRSS
GQGRSSQQANMYQHVQSKPTRPSSGAMVMSKSSERLSPMMKEVKAKFKKSQSIDEIDMGS
YNVYSIPVDTYSSSIENQGSVDRPDMPGPMEQSMSRSQSAPMLDDDDAYGANSQQQKPSI
PKKVYHFDQSFNPQGAMDLRNQQQERRAPPPFPNTPEYINHPGKTLPKELVSPRGYRGYP
PMDQMFSYSQPSVNEENQPPQQQQPFPIPSQRSRPGFLRRADSLVSSTELALFRRVQEAQ
EMQQKSDHYGRQHFKGMLEHQNSLASMAQQDQQYNKRNGRYEEDYSSYQEPKKPIMGYPT
KSLTQRRPLSARSYSTETFGASQARPVSARPTMAALLEKMPPDYNLSTCTENIKSPDEMK
MRTMQLQHKPEDMSSKMPVDWRQQLLRHIEAKRLDRSAVLKHNTVNFGMLCSGGYAAPHA
SRSMTINFYNNMNKHENQTTQWLPLPNTPSQQSNILDNGQEVVSPTTQWAPYSLGRRDVP
PENIMKKLPDSLPNGLNYPQAGGHHHHHPHQSQTMIVTSTSATPPHRSVRDQQYEGAINK
ISIQQYQSPLPMATTTRPQSARCLIQTKGQKSMDDFQEQFCVRIEKNPGLGFSISGGISG
QGNPFKPSDMGIFVTRVQPDGPASNLLQPGDKILKANGHSFLHMEHETAVSLLKNFQKTV
DLVILRESTI
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggacaattactcacatctacaactgcagtgtctggagatgacgactaagaggaagatc
attgggcgcctggtgccgtgccggtgcttccggggtgaggaagaggtcatctcagtgctg
gactactcccactgcagtctgcagcaggtgcccaaggagatcttcagcttcgagcgcaca
ctggaggagctctacctggatgccaaccagattgaggagctgcccaagcaactatttaac
tgtcaggctctccgtaaactgagcatacctgacaatgacctgtcaaacctgccaaccacc
atagccagccttgtaaacctgagggagttggacatcagtaaaaacggtattcaagagttc
ccagacaacattaaatgctgtaaatgcctatctgttgtggaggccagtgtaaatcctatt
gccaagctcccagagggcttcacccagctcctcaacctgacacagctcttcttaaacgat
gcctttctggaatacctccccgccaactttgggagactttccaagttacggatcctggaa
ttgcgagagaaccacctgaaaacgatgccaaagtcaatacacagactgtcacagctggag
cgattagacttgggaagcaatgaattcactgaactgcctgaagtcctggagcagatccat
aacctaaaggagctgtggatggacaacaactcactgcagacaatacctgggtgtataggg
aagctgaggcatctgcgctacctggacctggctaaaaacaggattgaaagcctggacact
gacatctctggctgtgagtccctggaggacctcctgctctcctccaacatgctgcagcat
ctgcctgacaccataggaatgttgaaaaaactcacaacattaaaagtggatgacaaccag
ctcacctcactgcctaacaccattggaagtggacgcgccaaattaggtttatcgctttta
gaagagtttgactgcagctgtaatgaattggagtccctgcccccaaccattggctacctg
cataacctccgcacattttctgctgatgagaacttccttgttgaactacccagggagatt
gggaactgtaagaatgtgacagtcatgtcgttgcgctccaataagctggagtttctacct
gacgaaattgggcagatgaccaagctacatgttctcaatttaagcgacaatagattaaaa
aaccttccgttcacgttcacaaaactaaaagatcttgctgctctttggctatcagacaat
cagtccaaggccctgatccctctccagaccgaggcccatccagagaccaagcagagggtc
ctcaccaactacatgttccctcagcaaccacgacatgatgaggactaccagtcagacagt
gacagtttcaaccccaccttatgggaggaacagcgtcagcagaggatgactgtggccttt
gagttcgaggagaagaaggaggaagaggacaactctggaaaagtcaaggttgagatcaat
ctgaagcgctaccctacaccgtacccagaggatctgaagaacatggtgaagtcagtgcag
aacatggtgggcaagaaccagcatcccctcagcactaactgctctggtaccaatatggag
tcacgaaaacaagaacagtatgagcccccctggcccatgccccccaaagaggtgatggag
agagagatgaaagagagagaaagagagttcaacaagactcagatgacagagcagggtgta
atccacaattctgccatcgacatcccaaagcgcaaggacaaggaggatctgactgagagc
tcagaggattctatgggcggctctccgaatgacatccgtatctctgatatgaggcccacc
ctggtggaaccgcccatgtacaaaccaaaagttgtattactgggaaaagacaagaaagaa
tctatagatgagtcagacccagacaagatgcattgcctgaacaacagtggctcgtcggcc
acgtactcagactactctccgtcccagggttcttctggctcttccaaccccccggggaat
gggtccaccttgcaggctgctgggaaggatggaggagtgcctcaacaacactggaccaac
aggctggctcagcagttccccaagccgatcgagaccaagcccctactgagtcagagagac
cccagagagacccctccctccagcacactgcagcagcgcagcgagcggcgccccctcagc
gacacctttgaccagtggaacgactcctcccactatgacaacacaggcttcgtgtctgaa
gaagctcctctggagactcccagtggtagcagcagtggtaaccccatgctgggctccaag
tcctgcagctcctccacctcccatgggggccgccggcccctcatgaggcaggagcgcatc
gtgggcatccccttggagctgcaggatgcccctcaccaacacccctcccaccaattccat
aatgtccgcaacatgcccgaaactgaagtatctcagcctccccctcccaacccgtggcag
aactggacgaggacgcccagtcccttcgaggaccgcacagctttcccctccaagctgagc
tccccaggcaacagccccaatcctgaccgcaacgactttgagcaggagatgcatcatgga
gagctgccgggcacgttcccctccacaggaacgtggggttacctagactccaggagctct
gggcaggggcgcagcagccagcaggccaacatgtaccaacatgtccaatccaagcccact
agaccaagctctggggccatggtgatgagcaagagctctgagcgcctctctcccatgatg
aaggaggtgaaggctaagttcaagaagtcccagagcattgatgagatagacatgggctcc
tacaatgtgtacagtattcccgtggacacctacagctccagcatagagaatcaggggagt
gttgaccgtccagacatgccgggccccatggagcagagcatgtcccggagccagtctgcc
cccatgctggacgatgatgatgcctacggagctaatagccagcagcagaagccttccatc
cccaagaaggtctaccacttcgaccagagcttcaaccctcagggggctatggatttgagg
aatcagcagcaggagaggagggcccctccacccttccccaacacccctgagtacatcaac
catccggggaagaccctgcccaaggagctggtgagccccaggggctaccggggttaccct
cccatggaccagatgttctcctactctcagccctcagtcaacgaggagaaccagccgccc
cagcagcagcaacctttccccatccccagtcagcgctcccggcctgggttcctgaggcgg
gccgactccctggtcagctccacagagctggccctgttccgcagggttcaggaggcccag
gagatgcagcagaagtcggaccactatggccggcagcatttcaaaggcatgttggagcac
cagaacagtctggccagcatggcccagcaggaccaacagtacaacaagaggaacggcagg
tacgaggaagactactcctcctaccaggagcctaagaagcccatcatgggctaccccact
aagagcctaacacagcggcgccctctgtcggccaggagttacagcacggagacgttcggg
gcgtcccaggccaggcctgtttctgccagacccaccatggctgccttgttggagaagatg
cccccagattataatctgagcacgtgtactgagaatataaagagccctgatgagatgaaa
atgcgcaccatgcagctgcagcataagcctgaagatatgtcctctaagatgccagtagac
tggaggcaacagctgcttagacatatagaggccaaacgattagaccggagcgctgtcctt
aagcacaacacagtaaacttcggcatgctgtgctctggaggctatgctgcaccgcatgcc
agcagaagcatgacaataaacttttacaataacatgaataagcatgaaaaccaaacaaca
cagtggctacctctacccaataccccctctcaacagagcaatatattggacaacggccag
gaggtggtctctcccactactcagtgggccccctactcactgggcaggagagacgtgccc
ccagaaaacatcatgaaaaagcttcctgactctttgcctaacgggttgaattacccacag
gcaggcggccaccaccaccaccacccccaccaatcacagaccatgatcgtgacatccaca
tcggccacacccccacaccgctcagtgcgggaccagcagtatgagggtgccatcaacaag
atctccatccaacagtaccagtctcccctgcccatggccaccaccacccgtccccagagt
gcacgctgcctcatccagaccaaaggccagaagagcatggacgacttccaggagcagttc
tgtgtgcggatagagaagaatccaggtttagggttcagcatctcagggggaatcagtggc
caagggaaccctttcaagccttctgacatgggtatctttgttactagggtacagcctgat
ggaccggcctccaacctgctacagcctggggacaaaatactgaaggccaatggacatagt
tttttacacatggaacatgaaactgctgtgtctcttctgaagaatttccagaaaactgtg
gacttagtaatcttgagggagagcacaatttaa
DBGET
integrated database retrieval system
