Oncorhynchus kisutch (coho salmon): 109897942
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Entry
109897942 CDS
T09179
Name
(RefSeq) tetratricopeptide repeat protein 39A-like isoform X1
KO
K24943
tetratricopeptide repeat protein 39
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109897942
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
109897942
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Iml2-TPR_39
TPR_16
Motif
Other DBs
NCBI-GeneID:
109897942
NCBI-ProteinID:
XP_020348212
Ensembl:
ENSOKIG00005002222
LinkDB
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Position
LG10:complement(24425544..24449507)
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AA seq
603 aa
AA seq
DB search
MSFITGCRRSVNKNDCKGLSVIHSAELDPMHTDFKLQIPGNKDLLNSTEPLNTSQKSDLS
VALEDCMAALDLFLRNDFEEALSRLQCRIKDSMYHALTYATILEMQAMMTFDPEHIMAAG
NTMKEAQAVCQRFRKKSTFSNRNFTEEELHAEVCYAECLLQRAALTFLQDESMISFIKGG
IKVRNSYQTYKELHTVLQSSSYVHGDNHGHFEGGVKLGVGAFNLMISMLPTRTLRLLEFV
GFSGNKEFGLQQLTEGSAGQTFRSFLCNMLLLCYHTFMSFILGTGEGDVEDAEKMLQPYL
KQYPKGSIFLFFAGRIEVIKGNLDAAIERFEECCEAQQQWKQFHHMCYWELMWCFTYKRH
WKMAYFYADLLSKENAWSKATYAYMKGAYLSMLTREECQPFQESEVALFRQVHGLKQKIA
GKSLPTEKFAIRKARRYLTENPITLPAPPLEMMYIWNGYTVIGKHKDLTEGMLKTLDEAQ
AKLDNSQRTEFSIDDQCLVSLLKGLCLKHLGHQEEAEAYFTLVLCNETQIKFDHYLVPNA
LLEHGLLCLEQGRKEEGIKLLETAKQNYKNYSMESRTHFRIQAALHKAKATGENGIHTMP
SSP
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagttttatcactggttgtagacgcagcgtgaataaaaatgactgcaaagggttgtcc
gtcatacacagtgcagaacttgaccccatgcacacagatttcaagttacagataccaggc
aacaaagatttactcaactctacagaaccattgaacacgtcccagaagtcagacctgtct
gtggccctggaggactgcatggcagcattggacctgttcctgaggaacgactttgaggag
gccctgtccaggcttcagtgcagaatcaaagacagcatgtaccatgcgctcacatacgcc
accatactggagatgcaggccatgatgacctttgacccggagcacatcatggcagcgggt
aacaccatgaaggaggctcaggcagtatgtcagcggtttcgcaagaagtcaacctttagc
aacagaaacttcacagaagaggaactccacgctgaagtgtgctatgcagaatgtctccta
cagagggcagcactcaccttccttcaggatgaaagcatgatcagtttcatcaagggagga
atcaaagtgaggaatagctaccagacgtataaagagcttcatacggtcctccagtcctct
agctacgtccatggtgacaatcatgggcattttgaaggcggggtcaagcttggagtagga
gccttcaacttgatgatctccatgctgcccacacggacccttaggttgctggagtttgtg
ggtttctctggaaataaggagtttggcttgcagcagctgacggagggctctgcagggcag
actttcaggtccttcctgtgtaacatgctgctcctctgctaccacaccttcatgagcttc
atcttgggcacaggggagggggatgtggaggatgctgagaaaatgcttcagccctatctc
aaacagtatcctaagggatctatcttcttgttcttcgctggtcgaatagaggttatcaaa
ggaaacctggatgctgctatagagcgctttgaggagtgctgtgaagctcagcaacagtgg
aagcagtttcatcacatgtgctactgggagctgatgtggtgtttcacatacaagagacat
tggaagatggcctacttctacgctgatctgctcagcaaagagaatgcatggtccaaggca
acatatgcctatatgaaaggtgcctacctcagcatgctgaccagggaggaatgccaacca
ttccaggagagcgaggtagcgctgttcaggcaggtacatgggcttaagcagaaaatagct
ggaaagtctttgccaactgagaagtttgccatccgaaaagcccgtcgttacctgactgag
aacccgataacgctccctgcacctcctctggagatgatgtacatctggaacggctacaca
gtcatcggtaaacacaaagacctcacggagggcatgctgaaaacactggacgaggcacag
gcaaaactcgacaatagccaaaggacagagttctccatagacgaccagtgtttggtgagc
ctgcttaagggtctgtgtctgaagcacctgggacaccaggaggaggctgaggcctacttc
accttggtcctttgcaatgaaacacagatcaagtttgatcactacttggttcccaatgca
ctgcttgagcatgggctgctgtgtctggaacaagggaggaaggaggagggcatcaaacta
ctggagacggccaagcaaaattacaaaaactactccatggaatcgcggacacatttccga
atccaagctgctttgcacaaggccaaggccacaggagagaatgggattcacaccatgccc
tccagcccgtag
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