Oncorhynchus kisutch (coho salmon): 109897956
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Entry
109897956 CDS
T09179
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03030
DNA replication
oki03410
Base excision repair
oki03420
Nucleotide excision repair
oki03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109897956
03410 Base excision repair
109897956
03420 Nucleotide excision repair
109897956
03430 Mismatch repair
109897956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oki03032
]
109897956
03036 Chromosome and associated proteins [BR:
oki03036
]
109897956
03400 DNA repair and recombination proteins [BR:
oki03400
]
109897956
DNA replication proteins [BR:
oki03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109897956
DNA Replication Termination Factors
ELG1-RFC complex
109897956
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109897956
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109897956
Check point factors
HRAD17(Rad24)-RFC complex
109897956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_22
AAA_30
AAA_assoc_2
AAA_11
Mg_chelatase
DUF815
RuvB_N
AAA_24
SLFN-g3_helicase
AAA_28
AAA_14
AAA_5
AAA_19
Gp44_lid
RPA_interact_N
Cdc6_lid
ResIII
AAA_7
Kinesin
ATPase_2
Motif
Other DBs
NCBI-GeneID:
109897956
NCBI-ProteinID:
XP_020348235
Ensembl:
ENSOKIG00005012779
UniProt:
A0A8C7FKU6
LinkDB
All DBs
Position
LG10:complement(25101536..25110384)
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGTSTQGTRPLKEKGAGTSGEKKQKSVPWVEKYRPKCMEEVAFQEEVVAVLKKTI
EGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKRF
AQLTVAGHRTDGKPCPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYVSRI
IEPLTSRCSKFRFKPLANQVQEERLLEICYKENLKYSKEGIAALVKVSEGDLRKAITFLQ
SAARLNTDNEITESAVIEIAGVVPPKMIDNLLKICYKGTFEKLEIAVRNMVDEGYAATQI
INQLHEAIIEEELNDKQKSAITEKMAVVDKCLVDGADEYLQMLSLCSVILQQATQSN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggaacatctactcaaggcaccagacctctgaaagagaaaggt
gccgggaccagtggagagaagaagcagaagtctgtcccctgggttgagaaatatagacca
aaatgtatggaagaggtggcatttcaagaggaggtggttgctgtgctgaagaagactata
gagggcgccgatctccccaatctgctgttctatggaccacctggaacaggaaagacctcc
accatcctggctgcagccagggaactttatgggccagagctgtaccgacagagagtcctg
gaactgaacgcctctgatgagagagggattcaggtggtcagagagaaagtcaagagattt
gcccagctgactgtagcaggacaccgcactgatgggaaaccatgcccaccctttaagatc
atcatcctggatgaggctgactcaatgaccaacgctgctcaggctgctctcagacgcacc
atggagaaggagtcccggaccacccgcttctgtctcatctgcaactatgtcagcaggatt
attgagcccttgacatccagatgctcaaaattccgcttcaaacctctggccaatcaggtc
caagaagagcgcctgctagaaatctgttacaaggagaatctcaagtactcgaaggaggga
attgcagcgttggtgaaggtttcagagggggatttgagaaaagccataacctttcttcaa
agtgctgcacggctgaacacagataatgagatcacggagagcgcggtcatagagatagca
ggggttgttccccccaagatgatcgacaatttgcttaaaatctgttacaagggcacattt
gaaaaattagagattgctgttcggaacatggtagatgaaggctatgccgccacacagatc
atcaaccagctacacgaagccatcatagaggaagagctgaacgacaagcagaagtctgcc
atcacggaaaagatggcagtggttgataagtgtctagtggatggtgcagatgagtacctg
cagatgctgagtctgtgttctgtgatcttgcagcaagccacccagagtaactga
DBGET
integrated database retrieval system
