Oncorhynchus kisutch (coho salmon): 109897978
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Entry
109897978 CDS
T09179
Name
(RefSeq) protein zyg-11 homolog isoform X1
KO
K10350
Zyg-11 protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109897978
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
109897978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
LRR_4
ELMO_ARM
Arm_3
BAF250_C
Ax_dynein_light
Motif
Other DBs
NCBI-GeneID:
109897978
NCBI-ProteinID:
XP_020348269
Ensembl:
ENSOKIG00005016608
LinkDB
All DBs
Position
LG10:complement(27041859..27070570)
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AA seq
754 aa
AA seq
DB search
MAFNSLNMDEASPASLTDLCLSYVSRNLERFCVKHADGSLCLRDSLLFPQELADQLLAKM
ATEGLLNDSTVGVFRSSEYLRLRRACIRTARISAEAFQRALCPHRLLELDAARVNADLTI
SDILHGLASNKHCRESLQRLVLTGLTMSSLEEPSCHCFSSLQGLRSLSLANVDFYDSGLA
DVCSLSRLESLDLSNTSVTNLNPLLGLRERLRSLTLHQLKRLEMSTAQLLAVIGQLEALQ
HLDISDDKQFTSDVARQLLGEPGILPALVSLDVSGRKQVTDAAVRAFVEERPGMTFVGLL
ATDAGFSNFLNGKGSLKVTGEANETQICEALRRYSEREGFVREALFHLFSLTHVMEKPRP
DILKLVVLGMKNHPATLNVQLAASACVFNLTKQDLAAGIPVSLLGTVTQLLLEAMCTFPN
HQQLQKNCLLSLCSDRILQEVPFNRFEAAKLVMQWLCNHEDQNMQRMAVAIISILAAKLS
TEQTAQLGAELFIVKQLLHIVHQKATQGVVDATLKFTLSALWNLTDESPTTCRHFIENQG
LDLFIKVLESFPSESSIQQKVLGLLNNIAEVGELHVELMVQGFLDHICSLLHSPEVEVSY
FAAGILAHLTSRGEAAWTLSITLRSDLLEQLHSTILKWPTPACEMVAYRSFNPFFPLLEC
FHTPGVQLWAAWAMQHVCSKNAPRYCSMLLEEGGLHQLEKVQTHPDTHADVMRLAESILE
SLQRHQARTRQTTQTHTHTRCPLQPHTHKEGDKP
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaattctttgaacatggatgaggcatcccctgcatctctgacggatctgtgt
ctgtcctatgtcagtaggaacctggagaggttctgtgtgaagcatgctgatggatctctc
tgtctcagagactctctgctgtttccccaggagctagctgaccagctgctggctaagatg
gccactgaaggtctgttgaatgacagtacagtaggagtgtttcgtagcagtgagtacctt
cggctgcgtcgtgcgtgtattcgtacggcccgtatctctgccgaggccttccagagagct
ctctgtcctcaccgcctgctggagctggacgctgctagggtcaacgctgacctcacaatc
tctgacatactacatggccttgcctccaacaaacactgccgggagagcttgcagcggttg
gtccttacaggtctgaccatgtcctctctggaggaaccatcatgtcactgtttcagctct
ctccaggggctgcggtccctctccctggccaatgtggacttctacgactctgggctggct
gatgtgtgttccctgtcccgcctggagagcctggacctgtccaacacctccgtgaccaac
ctcaaccctctactgggactcagagagaggctgaggtcactaacactacaccagctgaag
aggctggagatgagcactgcccagctactggctgtcattggacaactggaggcactgcag
cacctggacatcagtgatgataaacagttcacatcagacgtggctcgtcagctgctgggt
gagcctgggatcctgcctgctctggtctcgctggatgtatctggacgcaaacaggtgacg
gatgcggcggtcagggcgtttgtagaggagcgtccagggatgacctttgttggtctgctg
gctacagacgctggcttctctaacttcctcaatggaaagggcagcctcaaggtgacagga
gaggccaatgagactcagatctgtgaggcgctgcgtcgctacagtgagagggagggcttt
gtcagagaggctctgtttcatctcttcagtctcacacacgtcatggagaaaccacgccct
gacatactcaagttggtagttttggggatgaagaaccaccctgccaccctgaacgtccag
ttggcagccagtgcatgtgtgtttaacctgaccaagcaggacctggcagcgggcatacct
gttagtctgctgggcacagtcactcaactactgctggaggccatgtgcaccttccctaac
caccaacagttgcagaagaattgcctgctctctctgtgcagtgaccgcatactgcaggag
gttcccttcaacaggtttgaagcagctaagctggtgatgcagtggttatgtaaccatgag
gaccagaacatgcagaggatggctgtggctatcatctctatactggctgccaagttgtct
acagaacagacggcacagctgggagcagagctcttcatagtgaagcagcttctccacatt
gtgcatcagaaggctacccagggcgtggtggacgccaccctcaagttcacactgagcgcg
ctctggaacctcactgacgaatcaccaaccacctgccgccattttatagagaaccaggga
ctggacctgttcatcaaagtactggagtcattcccctctgagtcttccatccaacagaag
gtgttggggctgctgaataacatagcggaggttggggagctgcatgtggagctgatggtt
cagggcttcctggatcacatctgctccctgctccacagccctgaggtggaggtgtcctac
ttcgctgctgggatactggcccacctcacctccagaggagaggctgcttggacactcagt
atcacactgaggtctgacctgctagaacaactgcactctaccatcctgaagtggccgaca
ccagcgtgtgagatggtggcctacaggtcctttaaccctttcttccccctgttggagtgt
ttccacaccccaggagttcagctgtgggcggcctgggccatgcagcatgtctgcagcaag
aacgcccctcggtactgcagtatgctgctggaggagggaggtctgcatcagttggagaag
gtccagacacaccctgacacccacgcagacgtcatgcgattggccgagagcattctggag
agcctgcagcgccaccaagctcgcaccaggcagaccacacagacacacacacacacccgc
tgcccgctacaaccccacacacacaaagagggtgacaagccctga
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