KEGG   Oncorhynchus kisutch (coho salmon): 109898012
Entry
109898012         CDS       T09179                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oki01009]
    109898012
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oki04121]
    109898012
Enzymes [BR:oki01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109898012
Protein phosphatases and associated proteins [BR:oki01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109898012
Ubiquitin system [BR:oki04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109898012
SSDB
Motif
Pfam: SH3_9 SH3_1 SH3_2 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-RING_11 zf-rbx1 zf-Nse Prok-RING_4
Other DBs
NCBI-GeneID: 109898012
NCBI-ProteinID: XP_020348327
Ensembl: ENSOKIG00005003173
LinkDB
Position
LG10:29024168..29079783
AA seq 864 aa
MDESVLLDLLECPVCLERLDATAKVLPCQHTFCRRCLQGILSSRAELRCPECRTLVECAV
DELPSNILLVRLLDGIKQRPRRAGPVAGVCTNGTAGVRMQGNGPRDSGTPGAQPQRGQAK
STPVRGVPQLPCAKALYNYDGKEPGDLKFSKGDVIILRRQVDENWYHGEIGGVHGFFPTN
FVQIIKPLPQPPPQCKALYDFELKDKEADKDCLPFTKDDILTVIRRVDENWAEGMLGDKI
GIFPISYVEFNSAARQLIELDKPGDSSGDSGEGASSGPQSNGGPHRAGEKKNSKKRHSFT
SLTMSHKPCLAPPPQRHSMEISGPVLISSSNPTAAARISEISGGLSCSAPSQVHICTAGL
IVTPPPSSPVTTATVFTFPPETSYKSIPVDARPPPPPPPPQSSAVGAASSLAASQRPFPS
TSEQSGRQRPTVYVALFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVFP
GNYMSPVSRTVSGSTQPKAPLALCTQAGRGVTVVSPSSTPLGAIVPGPDFNKALPICPAL
ASPLPAGMVTAAHVTTGQAKVLMHMTSQMTVNQARNAVRTAACHSQDRPTAAVTPIQSQT
SVAYLAVCQSQTCSSSNPAQGCVRAGVALGCAAASLTPPNVSAASLDGDALRQVAVLTMP
VAPGNGNSMSANSSLACRLDKDGKREKKGILKLLSSNKKKSRPSPPSSPTLEAEQAATGD
VFQGAMGPDITPSPPSAGVVVGNHGRAVPCPVEPESTAASSSSCSSAAELTHRKSSPLDG
CTPIAPPPRQACSSLTSQQHDARPILCERYRVVVSYPPQSDAELELKEGDIVFVHRKRED
GWFKGTLQRNGRTGLFPGSFVDGI
NT seq 2595 nt   +upstreamnt  +downstreamnt
atggatgaatcagtgctgttggacttgctggaatgcccagtgtgtttggagcggctggat
gccacagccaaggtcctcccttgccagcacaccttctgcaggcgctgccttcagggcatc
ctgagctcccgggcagagctgcgatgcccagagtgccgtacgctggtggagtgtgctgtg
gatgagctgcccagtaatatcctcctggttcggctgttggacggcatcaaacagagaccc
cgcagggcgggccctgtagctggagtctgcaccaacggcacagctggagtcaggatgcag
ggcaacgggcccagagactcaggcactccgggagcacagccccagagaggccaggcaaag
agcaccccagtgaggggtgtaccccagctgccctgtgccaaggccctgtacaactacgat
ggcaaggaacctggggacctcaagttcagtaagggtgacgtcatcatcctgcgacgtcag
gtggatgagaattggtaccacggggagattggcggagtccacggtttcttccccaccaac
tttgtccagatcatcaagccactgccgcagcccccgccacagtgcaaggccctctatgac
tttgagctcaaagacaaggaggcagacaaggattgcctgccctttactaaggatgatatt
ctgactgtgattcgccgagtggatgaaaactgggcagagggaatgctgggggataaaata
ggaatcttccccatatcatatgtcgagtttaactctgcggcccgccagctgattgagtta
gacaagcctggggactccagtggggactctggcgagggggcctcgtcgggcccccagagt
aacgggggcccccaccgggccggggagaagaagaacagtaagaagcgccactcgttcacc
tccctcaccatgtcccacaagccctgtctggccccgcccccccagagacactccatggag
atcagtgggccggtcctcatcagctcctccaaccccacggcagccgcacgcatcagcgag
atcagcggaggactgtcctgcagcgcaccctcacaggtacacatctgcacagctggactc
atagtgacccctccccccagcagtccagttactacggcaactgtcttcacgtttcccccg
gagacgagctacaaatccatccctgtggatgctcgccctcctcccccgccgcctccacca
caatcctcagcggtgggagcagcctcctcgttggctgccagtcagagacccttccccagc
actagcgaacagagtgggcggcaaagacccacagtctacgtggccctgtttccctacacc
ccccgtaaggaggatgagttggagctgaggaagggagagatgttcctggtgctggagcgc
tgtcaagatggatggttcaaaggcacctccatgcacactggcaagataggagtgtttcct
ggcaattacatgagccccgtcagcaggacggtgtccggcagcacccaacccaaagcgccc
cttgctctgtgcacccaggctgggcgaggggtcaccgtcgtcagcccctcctccactcct
ctgggggccattgttccagggcctgacttcaacaaggccctccccatctgccccgccctc
gccagccctttacccgcgggcatggtgactgctgctcacgtgacaacgggacaggccaag
gtgctcatgcacatgacgtcccagatgactgttaaccaggcacgcaatgctgtcaggaca
gctgcatgccacagtcaggaccggcccacggctgctgtgacgcccatccagtcacagaca
tctgtagcctacctggcagtgtgccaatcccagacctgctcctcctccaaccctgcccag
ggctgtgtccgtgctggggtggcactgggatgtgctgctgcctccctcaccccgccaaac
gtcagcgccgcgtccctggatggcgatgccctgcgacaagtggcagtcctcaccatgcct
gtcgcccctggcaacggcaactccatgtcagctaactcctccctcgcctgtcggctggac
aaggatggcaagagggaaaagaaaggtattctgaagctgttgtcgtctaacaagaagaag
tctcgcccctctcccccctcatcccccaccctggaggcagagcaggctgctacgggggat
gtcttccagggggccatgggccccgacattaccccttctcccccctctgctggcgttgtc
gtgggtaaccatggccgtgctgtcccctgccctgtggagcctgagtctactgccgcctct
tcatcctcctgttcctcagccgcggagttaacgcaccgtaagagtagccccctggacgga
tgtacccccatcgccccgccacctcgccaggcatgctcctccctcacctcccagcagcat
gacgctcggccaatcctatgcgagaggtacagagtggtggtgtcctacccccctcagagt
gatgcagagctggagctcaaagagggagacatagtgtttgtccacaggaagagggaggac
ggctggttcaaaggaacactccagaggaatggcaggaccggactgttccctggcagcttc
gtagacggcatctga

DBGET integrated database retrieval system