Oncorhynchus kisutch (coho salmon): 109898084
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Entry
109898084 CDS
T09179
Name
(RefSeq) cadherin-2
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109898084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109898084
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109898084
04090 CD molecules [BR:
oki04090
]
109898084
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
109898084
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Major cadherins
109898084
CD molecules [BR:
oki04090
]
Proteins
109898084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2304
Cytomega_TRL10
DUF3139
Stevor
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
109898084
NCBI-ProteinID:
XP_020348454
Ensembl:
ENSOKIG00005019360
UniProt:
A0A8C7H8L4
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All DBs
Position
LG10:complement(35040666..35150650)
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AA seq
925 aa
AA seq
DB search
MFRTLVALLMRLAAVQIAVQGGGAVGSLPWRQGSLPCTRGFSQEEYSVAVDEELREGQAL
LTVRFADCGLGDRVLLEVVDVEDFRLDEDGTVYARHAFRLADRKSALVVRARDLETKEDW
KTHVYLLLRNDGKRETTEHKLIKQVNASSAAVTQQVREIVFPWHSLVVGDDGSLRRVKRD
WVIPPINVPENSRGQFPEELVRIRSDRDKNSLLRYSVTGPGADQSPTGIFIINPISGQLS
VTKPLDREHISNFHLRAHAVDLNGNQIENPIDIVINVIDMNDNRPEFTHTIYNGSVPEGS
KPGSFVMTVTSLDKDDPKTANGMLRYKIISQNPENPSSNMFTINNKTGGIITVAAGLDRE
KVPQYTLIIQATDMEGNPTYGLSNTATAIIRITDVNDNPPEFTADKFYGEVQENRVNVIV
ANLTVTDKDQPHSAAWSTVYRITAGDPTGRFSIPTDLTTNEGLVTVVKPIDYEVSRSFVL
TVLAENEVSLARGIHLPRQSTATVSVRITDVNESPEFSPNPKVIKLEEGLPGGSLLTTFT
AQDPDRYMQQNIRYAKVFDPANWLKIDPVNGRISTIAVLDRESPYVKNNLYNITFMATDN
GIPPASGTGTLQMYLLDINDNAPRVFPPEVEMCEKPEPNTINITASDPDLTPNAGPFAFE
LAKRPADARRNWTLTRLNGEYAQIRLRIGFLESGIYEVPIIITDSGNLPMSNTSYLQVKV
CQCDHHGDCVDMERIIAAGLGTGAIIAILICIIILLVMVLFFVMWMKRRDKERQAKQLLI
DPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDALETEMVKVGIRRMDERPLHQDHIYP
LRSAAPHPGDIGDFIHEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLHSSSSGGD
QDYDYLSDWGPRFRKLADLYGGGDN
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaaccttagtcgcgctgctgatgcgactggcagctgtgcagattgctgtgcag
ggcggaggggccgtggggtcattgccatggaggcagggatcgttgccgtgcacacgaggc
ttctcccaggaggagtacagtgttgccgtggatgaggagctaagagagggacaagcactc
ctcaccgtgaggttcgcagactgtggcctgggcgacagggtgctgttggaggtggttgac
gtggaggacttcaggctggatgaggatggcacggtgtacgcccggcatgccttccgtctt
gccgacaggaagagcgccttggtggtgcgagcgagggatctggagaccaaggaggattgg
aagacgcatgtttacctcctcctccggaacgacggaaagcgagagactacagaacacaaa
ctcatcaaacaggtgaacgccagctctgcagctgtgactcagcaggtgcgagagatcgtg
tttccatggcacagcttggtcgttggggacgatggatctctgaggcgggtgaagagggac
tgggtcattccccccatcaacgtccctgagaactcacgaggacagttccccgaggagcta
gtcaggatccggtcggaccgtgataagaacagtctcctgcgttacagtgtgactggaccc
ggtgctgaccagtctccgaccgggatctttatcatcaaccccatctctggccagctctct
gtgaccaaacccctcgaccgggaacacatctccaatttccatctgcgagcccatgctgtg
gacctgaatgggaaccagatagagaaccccatagacatcgtcatcaacgtcatagacatg
aatgacaacagaccagagtttacacacaccatctacaacggatcagtaccagagggatcc
aaaccagggtcctttgtgatgacagttacgtcactggacaaggatgaccctaaaacagcc
aatgggatgctccgatacaagattatatctcagaatcctgaaaacccctcctccaacatg
ttcacaatcaacaacaagacaggaggaatcatcactgtggctgcagggctagacagagag
aaagttcctcagtacacgttaataatccaggctactgacatggaggggaacccaacctat
ggcctgtctaacacagctacggctatcatcaggatcactgacgtcaatgataacccccca
gagttcaccgctgacaaattctatggagaggtgcaggagaaccgtgtgaatgtgattgta
gctaatctgacagtaacagataaggaccagccccacagtgcagcctggagtactgtgtac
aggatcacagctggagaccccactggacgcttctccatccccactgacctcaccaccaat
gagggactggtcactgtggttaagcctatagactatgaggtgagtcgttccttcgtgctg
acggtactggctgagaacgaggtttccctggcccgtggtatccacctgccccgtcagtcc
accgccaccgtgtctgtacgcatcacagacgtcaacgagagcccagagttctcccccaac
cccaaagtcatcaaactagaggaggggctaccgggcggctcgctactcaccacctttaca
gcacaggaccctgacagatacatgcaacagaacatacggtacgccaaggtgttcgaccct
gctaattggctgaagatagaccctgtaaacgggcggatctccaccatcgctgtactggac
agagagtctccatatgtgaagaataacctctacaacatcaccttcatggccactgacaat
ggcatccccccagccagtggtacaggtacattacagatgtacctgttggacataaatgac
aatgctcctcgtgtcttccctccggaggtggagatgtgtgagaagcctgagcccaacacc
atcaacatcaccgccagtgaccccgatctgacccctaacgccggccccttcgccttcgaa
ctggccaagcggccggcagatgcacgcaggaactggaccctcacacgcctcaatggtgaa
tatgctcagatcaggctgcggataggttttctggagagtggtatctacgaggttcctatc
atcatcacagactcgggcaacctgcccatgtccaatacatcctacttacaggtcaaggtg
tgtcagtgtgatcaccatggagactgcgtggacatggaacgcatcatcgcagcagggctg
ggcactggagccatcatcgcaatcctcatctgtatcatcatactgctagtgatggtgttg
ttctttgtgatgtggatgaagaggagggataaggaacgtcaggccaagcagctgctcatc
gacccagaggacgatgtcagagacaacatactgaagtacgacgaagaaggaggaggagag
gaggaccaggactatgacctgagccagctgcagcagcccgacgccttggagacggaaatg
gtgaaggtggggatccgacgtatggatgagaggcccctacaccaggaccatatatacccc
ctccgttctgctgcaccccaccccggagatataggagacttcatccacgagggtctgaag
gcagctgataatgacccgacagcgcctccctacgacagtcttctggtgtttgactatgag
ggcagtggctccaccgctggctccctcagctcccttcactcctcctcttccggcggagac
caggactacgactacctcagcgactggggcccacgcttccgcaagctggcagacctctat
ggtggaggggacaactag
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