Oncorhynchus kisutch (coho salmon): 109898086
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Entry
109898086 CDS
T09179
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109898086
Membrane trafficking [BR:
oki04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
109898086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_4th
Ig_TPPC8_3rd
Ig_TPPC8_C
Ig_TPPC8_2nd
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
109898086
NCBI-ProteinID:
XP_020348457
Ensembl:
ENSOKIG00005023849
LinkDB
All DBs
Position
LG10:complement(35633429..35715755)
Genome browser
AA seq
1516 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPMVAVLCSEDAEKVTRKNNLNFSELLRPFCRLTSEGHMRDPSN
QLQVVKNLRISVNNVVTRPSVPSSGVPGHAHRRLLSEVVLTCQPAEGGVANVITAGDYDL
NISDRSLKASVPWYSDWRDTLTELSTSKHYTATTPWFEAYRESFLQSMPASDHEFLNHYL
ACLLVVSSSEAVPVEKFLKLSQEQHRIQHSGEYTNPKWFIPNTLKYYVLLHDMSQGDEQR
ADSVYEDMKQRYGAQGCYLLKVNSRTAAAGADEQIPDPWSQYLHKSSLQSQDQYEDPAPV
VVNNTAVENNVGGTSEVDGHDSEEKDGVLVNSLDNTHPLQLDTPSDTPGSLDALRAVAVE
TKPPPLTTGVAAATSHGACLTLNDHDRIRLFIQEFTFRGLLPHIEKNIRQLNDQLVSRKG
LSRSLFSATKKWFGGGKVPEKSIAELKNTSGLLYPPEAPELQIRKMADLCFLVQLYDLAY
SCYHTAKKDFLSDQAMLYAAGALEMAAVSAFLQVGAPRPYPAHYMDTAIQTYRDVSKNMV
LAERCALLSAEVLKSQAKYSDAATLLIKMTSEDSDLRSALLLEQAAHCFINMRNPMVRKF
AFHMILAGHRFSKAGQKRHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQPENA
VTAFRHILTNDSQQTSTQQGAFLREYLYVYKNVTGACEVALPQLPLPCINSSATRVYFGH
ERRLAEGEKQAATHVSLDQEFDRDLAAMWQDLEEQVVAAAKRGVVPATFQSTQCCLNSQT
DNLRFPLAVVEEPIIVEVVFRNPLKVPLVLSDLSLLWKFTLKDFNRPQTQEDSVGDAVPI
SNEKEASVPRTSQKDDVIATEVISEFYLSPEETKLARLKLLPHQTGQLNILGLVYNLAST
SSTGDTTINSTAASQTEGPSAAEGTSVRGRQDLEIQGPRLNQTKEEKTSVSHGPDRRLDP
TITPPMPLLEVFFLQFPTALLCGEIRKAYVEFCNMSRVTLCGLRVASTHPDFFTFGSSSL
ATPLTPLSPTSFENCSAYKTLATPPGATPGSVAAVTLVSEGDFGSGTGLRGGVSGAGTGG
KGITEIPLGEGTLKPGESTQLPMWLRGPDQEGVHEIHFLFYYESAEKGGKISHRVLRHTV
FICASRSLSVRATACRSNTLPEEEEEERNGSMLVFVDVENINSSEAGVREFHIAQVSSSS
KQWRLHKCINPAEDKDCKLTSRERGKLCFRATRCKPLQVTLKAAEKYTFADLSLGNELII
TSTTPCADFFFRRCQPLESLRPPVAMETQGRHSRSQGVGHGGGDKDIAGVVRKCNEVDLD
IIILWKAFVVEDNKQVILEGQLHVALQTIDKEACSLTPKEEAQEMVLLKFKPELPPPMTR
PSMEQLSHLIKTNLQYPESYSHPFNQKSLCMVPVTLTLSNCSLAQVDVIIDLRHKTTSPE
SLEVHGSFTWLGQTQFKMQLGAQEVMRVQLRACFLHAGVYNLGTPRVFAKLADQGAMCET
SQQTATPALIIIINST
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtgcgtacagtcggtgcaggaattcatccaggactcgtttgtcccgatggtg
gcggtcctgtgcagcgaagatgcggagaaagtgactcgtaaaaacaacctgaatttctcg
gagctgctaaggcccttctgccggttaacatccgaaggtcacatgagggaccccagcaac
cagctgcaggtggtgaagaaccttcgcatcagtgtcaacaacgtggtgacacgcccttcc
gtcccttcctccggcgtccctggccatgcccaccgacggctgctcagcgaggtggtgttg
acatgccaaccggctgagggtggtgttgccaatgtcattactgctggtgactatgatctc
aatattagtgatcgctctcttaaagctagcgtcccctggtacagtgactggagggacaca
ctaacggaactcagcacctccaagcactacacagccacgactccctggtttgaggcgtac
agagagagcttcctccagtccatgcctgcctccgaccatgagttcctcaaccactacctc
gcctgtctgttggtggtgtcgtccagtgaggctgtaccagtggagaagttcctcaagctg
tctcaggagcagcacaggatccagcacagcggcgagtacaccaaccccaagtggttcatc
cccaacacactcaagtactacgtcctactgcacgacatgagccagggagatgaacagagg
gctgactctgtgtatgaggatatgaagcagaggtatggtgctcagggttgttacctgttg
aaggtcaactctcgtacggcggcagcgggagcagacgaacagatcccagacccatggagc
cagtaccttcacaagagtagcctgcaaagccaggatcagtatgaggatccagcccctgta
gtggtgaacaacactgctgtagagaacaacgttggaggaacatccgaggtggatggacat
gactcggaagagaaagatggagtcttggtcaacagtctggacaacacccatcccctccag
ctggatacacccagtgacacgcccggtagcctcgacgctctcagggccgtcgccgtggaa
accaagccaccgcccctcaccacgggagtggcagcggccaccagccatggggcgtgcctc
acgctgaacgaccacgaccgcatcagactgttcatccaggagtttaccttcaggggacta
ctgcctcacatagagaagaacatcagacagctcaatgaccagctggtctccaggaaaggc
ttgagtcgctctcttttctctgccactaagaagtggtttggaggagggaaagttccagag
aagagtatcgctgaactgaagaacacttctggcctcctctatcccccagaagcccctgag
ctgcagatcaggaagatggctgacctttgtttcctggttcagctctatgacctggcgtac
agctgctaccacacggccaagaaggatttcctctctgaccaggccatgctctatgccgct
ggggcactggagatggcagcagtgtctgcgtttcttcaagttggagctccaaggccgtat
ccagcacactacatggacacggcaatacagacctacagagatgtgtccaagaacatggtt
ctagctgaacgttgtgctctgctcagtgctgaggtactgaagagtcaggccaagtactct
gatgctgctaccctcctcatcaagatgaccagtgaggactctgacctgcgttctgccctc
ctattggagcaggcagcccactgtttcattaacatgcggaaccccatggtcaggaagttt
gccttccacatgatcctggcaggacatcgcttcagcaaggcagggcagaagcgccatgcg
ttgcggtgttactgccaggccatgcaggtgtataagggtaaaggctggtccctggctgag
gaccatatcaacttcactattggccgccagtccttcaccctgcgccaaccagagaacgct
gtcacagctttcagacacatcctcaccaatgacagccagcagacctccacacagcaggga
gccttcctccgggaatacctctacgtctacaagaatgttacgggggcatgtgaggtggcg
ctaccccagctgcccctaccctgcatcaacagctctgccaccagggtctacttcggtcat
gaacgccgcctggcagagggtgagaagcaggcagccacccacgtgtccttggaccaggag
tttgaccgggacctagctgccatgtggcaggacctcgaggaacaggtggttgccgccgca
aaacgtggggtcgttccggcaacgtttcaatccacccagtgctgcctgaacagtcagacg
gacaacctccgcttcccgcttgctgttgtggaggaacccatcatagttgaggtggtgttc
cggaaccctctaaaggttccactggttctctctgacctctcgctgctctggaagtttaca
ctcaaagacttcaatcgaccgcaaacgcaggaagactcggtcggagatgctgtgcccatc
agcaacgagaaggaggccagtgttcccaggacttcacagaaagatgatgtcattgccaca
gaagtcatctcagagttctacctgagccctgaggagactaaattggctcgtctgaagctg
ctgccccaccagacaggtcagctcaacatcctgggtctagtctataatctggcctccacc
tcctctactggagacactactatcaacagcaccgcagcctcacagaccgaaggtccctca
gcggcagaggggacatcagttcgtggtcgacaggacctagagatccagggaccgcggttg
aaccagaccaaagaggagaagacctcagtcagccacggtcctgaccgacgtcttgacccc
accatcacccctcccatgcccctgctagaggtattcttcctccagttccctactgccctg
ctatgtggtgagatcaggaaggcttacgtggagttctgtaacatgagtcgcgttaccctg
tgtggcctgcgggtggcgtccacgcacccagacttctttacctttggaagctcctcctta
gccacacctctcacccccctcagccccacctcttttgaaaactgctctgcctacaagacc
ctggccacaccccctggcgccacgcccgggtctgttgctgcggtgacactggtttcagag
ggggactttgggtcagggacagggttgaggggaggagtgtccggtgcgggtacggggggt
aaagggataacggagatccctctaggagaggggacactaaagcctggagaatctacccag
ctgcccatgtggctgagaggaccggaccaggaaggagtccacgagatccacttcctgttc
tactacgagagcgccgagaagggaggcaagatcagtcacagggttttgcgtcacacggta
tttatttgtgcgagtcgttcgctgtctgttcgggccacagcttgtcgtagtaacacacta
cctgaggaggaggaggaggagaggaacggcagcatgctggtctttgttgacgtggagaac
atcaactctagcgaggctggggtgcgtgagtttcacattgcacaggtctctagcagcagt
aaacagtggagactacacaagtgtataaacccagcagaagacaaagactgcaaactcacc
agcagagagagaggaaagctgtgcttcagagcaacacgatgcaaacccctgcaagttacc
ttgaaggcagcagagaaatacacatttgcagacctgagccttgggaatgaactgatcatc
acctccaccactccatgtgcagatttcttcttccggaggtgtcagcccttggagtctctg
agacctcccgttgccatggagacacaggggagacattccaggagtcagggggtggggcat
gggggcggggacaaggatatagcgggcgtggtcaggaagtgtaatgaggtggacctcgac
atcatcatcctctggaaggcatttgttgttgaggacaacaagcaggttatcctagaggga
cagcttcatgtggccctacagaccatcgacaaagaggcctgctctttgacaccgaaagag
gaggctcaggagatggtgctgctgaagtttaaaccagagctgccacctccaatgacacgg
ccctctatggaacaactctcccacctcatcaagaccaacctgcagtacccagagagctac
agccaccccttcaatcagaagagtctgtgtatggttccagtcactttgactctgtctaac
tgctccctggctcaagttgatgtcatcattgacctacgccacaaaactacaagccctgag
tccctcgaggtgcatggttcgtttacatggctgggccagacacaattcaaaatgcagttg
ggggcacaagaagtgatgcgagtgcagctgcgagcctgcttcctgcatgcgggcgtctat
aatctgggaacgccgcgggtctttgccaaactggcggaccagggagccatgtgtgagacc
agccagcagacggccacgccagcactcataatcatcatcaacagcacctga
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