Oncorhynchus kisutch (coho salmon): 109898181
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Entry
109898181 CDS
T09179
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109898181
Membrane trafficking [BR:
oki04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
109898181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
DUF5119
Motif
Other DBs
NCBI-GeneID:
109898181
NCBI-ProteinID:
XP_020348628
Ensembl:
ENSOKIG00005017104
LinkDB
All DBs
Position
LG10:44313021..44333286
Genome browser
AA seq
1049 aa
AA seq
DB search
MVHVYNCHPFASQQIVQAEQEPGLVCCGGGVLFVESAGGCKIEAFQLEAEGCPLICRYAT
MGTVQSILHSEIGDYLVTIEEKNNVTYLRTYTNWRYQVAEKTRVGVRLLGHFLRGSSMRG
APKEQMEIIEIPLFERPLCVACCGVTGDLLVGCPKSLVLFSLKRQALNDKLSILDFERCL
ILHLPGLSPQQVAICAGYIALQAELEVLVVKLERLPGSAPTQMSADKKSQDHCLVPKDMI
TGAEHNNEIEVRKEGLAGHLDQDDFFIFPKHQELLGDRAKDCGVKVSLEWTGMESEARGI
LAITYILYRRFAPDFFQGCTVEDTRLHSLQFHPVFTSNQEVCAEGGRGVEPTCVFCFFSL
PNTGYMYSVRGGVEMVSVYQYPEKAQQAVLTDLFLHIITKNALQCFSVRCSAVAARAEDP
YIDTTMKACPPITMEVCALRIQLFIGLKALCHDRHHIVLLTAADVETREDTERAARRNLN
RKSSSTKHRDPIEMSRGWNLYVVNTVPPLQLYNEMVEYSKKYEETNPLSQSCLHLLSEAH
LLLRATLLDPWVGNPVEQPQSSDQNLAQSLGYTATNNIGSTTDRTTDRQELQKAFQESCA
HLGDCFSRFDKRDCHLALPYYKMSGLSVTEVISRNRCLSSSPCGYGKGFLFFLKHSLYEE
TMEELTEETANEVLDIFGVAEPSQLPHVIASPSMVRASPDSGLAHLERLESIGAPSVPLT
LSKAALALRMGDLQLYRQHMDRHTEMLQVYGFIEEHKLLLHGRGHTVVPTPLAHHLRDSQ
EGLLVAAMVALHENNKVKLDEADLFFQKLCGNLSGPQGGPQLLVDFWEALLMASSQEAVI
QELLFRLTSVYIDRVTRRDSQGMKPLKTADDLINSCSHYGVPYPWVSILTPDHFSIIQDH
QEDLQKLQSLLCGPTLDVSSILPLLEQLPDGDNAGLSVHLLCATKLDRHESSIERLLDRC
PQAIIPYANHELQNNKMTLWWQKLFPELCERTRAAGGENTILLSALKETLVVVAMELNPL
EFLDLLPDDGTAHFFLPHLLECSQRNLMT
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtatacaactgccatcccttcgcttcccagcaaatcgtgcaagccgaacag
gagcctgggttagtgtgttgtggcgggggtgtcttgtttgtggagtccgcgggaggatgc
aagatcgaggcatttcaactggaagcggaggggtgtcctcttatctgccgctacgccacc
atggggactgtgcagagcatcctgcacagcgagataggggactacctggtgaccatcgag
gagaagaacaatgtcacctacctccgcacctacaccaactggcgctaccaggtggccgag
aagacacgtgtgggtgtgcgtctgctgggccacttcctgcgtggctcatccatgcgtggg
gctcccaaggagcagatggagatcattgagattccgctgtttgagcgcccactgtgtgta
gcgtgctgtggggtgacaggggacctgctggtgggctgtcctaagagcctggtgctgttc
agtctcaagagacaggccctcaacgataagctctccatcctggactttgagcgttgtctg
atcctccacctcccaggactgtcgccccaacaggtggcgatctgtgcggggtacattgcc
ctgcaggcagagctcgaagtgctggtggtcaagctggagagacttcctggctccgcccct
acccagatgtcagctgacaagaagtcccaggaccactgtctagtccccaaggatatgatc
actggagcagaacacaacaatgagatagaggtgaggaaagagggtcttgctggtcacctt
gatcaggatgacttcttcatattccctaagcaccaggagctgctgggggacagggctaag
gactgtggggtcaaggtctctctggagtggacaggcatggagagtgaggccaggggtatc
ctcgctatcacctatatcttatacagacgttttgctccagacttcttccaaggctgtact
gtggaggatacccgcctgcactccctgcagttccaccctgtattcaccagtaaccaggaa
gtgtgtgctgagggggggagaggggtggagccgacgtgtgtgttctgtttcttctcgctg
cccaacacgggctacatgtacagcgtgaggggtggagtggagatggtctcagtctatcag
tatccagagaaagcccagcaggccgtcctcactgacctcttcctccacatcatcaccaag
aatgctctccagtgtttctcagtgaggtgttctgcagtggcagccagagctgaggaccct
tacatcgataccaccatgaaggcctgtcctcccatcaccatggaggtgtgtgctttgcgg
atccagctgttcattggtctaaaggctctgtgtcacgatcgccaccacatcgtcctgcta
accgctgcagacgtggagaccagggaggacacagagagggcagctcgcaggaacctgaac
aggaagtcatcctccaccaagcaccgggatcccattgagatgagtcgcggctggaatcta
tacgtggtcaacaccgtccccccactccaactctacaatgagatggtggagtatagtaag
aagtatgaggagaccaaccctctgtctcagagctgtctgcacctgctcagtgaggcccac
ctcctcctgagagccacgctcctggacccctgggtgggaaatccagtggagcagcctcag
agcagtgaccagaacctagcccagtctctgggatatacagcaacaaacaacataggcagc
accactgacagaaccacagacagacaggagctacagaaggccttccaggagagctgtgcc
catttaggagactgcttcagtaggtttgataagcgtgactgccacctggccctgccctac
tataagatgtctggcctgtctgtgacagaggtgatctccaggaacaggtgtctgtccagc
agcccctgtggctatgggaaggggttcctcttcttcctcaaacactcactctatgaggag
accatggaggagctcactgaggagacagccaacgaggtgctggatatcttcggtgtggcc
gagccgtcccagctcccccatgttatagccagcccctccatggtcagagccagccctgac
agtggcctggcccacctagagcgcctggagtccatcggagccccctctgtacccctcact
ctctccaaggctgccctggccctccgcatgggagacctgcagctctacagacaacacatg
gacagacacacagagatgctgcaggtatatgggttcatcgaggagcacaaactgctgctg
catggcagagggcacacggtggtgcccacccccctggcacaccacctcagggacagccag
gaaggtctgctggtagcagccatggttgcgctacacgagaataacaaggtcaaactggac
gaggctgacctcttcttccagaagctttgtgggaacctgtcagggccccagggaggccct
cagctgctggtggacttctgggaggccctgctgatggcctcatcacaggaagctgtcatc
caggagctgctgttccgcctcacctctgtctacattgaccgcgtcacgcgccgagacagc
caaggcatgaaaccactcaagaccgcagacgacctgatcaactcatgttctcactatggt
gtgccgtatccctgggtcagcatcctgactccagatcacttcagtatcattcaagatcac
caggaggacctccagaaactacagtccctgctgtgcggtcccaccctggatgtgtcatcc
atcctgcccctgttggagcagctgccagacggggacaacgcggggctaagtgtgcacttg
ctctgtgccaccaagctggaccgccacgagagctccatcgagaggcttctagaccgatgt
cctcaggcaatcatcccctacgctaaccacgagctgcagaataacaaaatgactctgtgg
tggcagaaactgtttcctgagctgtgtgagagaaccagagcagcagggggagagaacacc
atcttactgtctgcactcaaagaaacgctggtggtggttgccatggagctgaatccactg
gagtttctggacctgttgcctgatgacgggacggcacacttcttcctgcctcacctgctg
gagtgcagccagagaaatctcatgacgtaa
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