Oncorhynchus kisutch (coho salmon): 109898252
Help
Entry
109898252 CDS
T09179
Name
(RefSeq) thyroid hormone receptor alpha
KO
K05547
thyroid hormone receptor alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04080
Neuroactive ligand-receptor interaction
oki04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109898252
04081 Hormone signaling
109898252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109898252
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oki03310
]
109898252
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109898252
Nuclear receptors [BR:
oki03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
109898252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109898252
NCBI-ProteinID:
XP_031689670
Ensembl:
ENSOKIG00005032167
UniProt:
A0A8C7IPH9
LinkDB
All DBs
Position
LG10:47210237..47304621
Genome browser
AA seq
416 aa
AA seq
DB search
MEPISNVEDPNSSEGDVKRWPNGPKRKRKNSTCSLKSMSALSLSVPGYIPSYLEKDEPCV
VCGDKATGYHYRCITCEGCKGFFRRTIQKKLHPAYSCKYDGCCIIDKITRNQCQLCRFRK
CIAVGMAMDLVLDDSKRVAKRRLIEENREKRKKDEIVKTLQTRPEPDSSEWELIRHVTEA
HHHTNAQGSHWKQKRKFLPEDIGQSPGAPTPDGDKVDLEAFSEFTKIITPAITRVVDFAK
KLTMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGV
VSDAIFDLGKSLAQFNLDDSEVALLQAVLLMSSDRSGLTSVDKIEKCQETYLLAFEHYIN
HRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggagcccatttccaacgtcgaggaccccaactcatcagagggagatgtgaaacgctgg
cccaatggaccaaaaaggaagagaaagaacagcacatgttcattgaagagcatgtctgca
ctgagcctctctgtcccaggatacatccccagctacttggagaaggatgagccatgtgtg
gtatgtggagacaaggccaccggctaccattaccgctgcatcacatgcgagggctgcaag
ggtttcttcaggcgaactatccagaagaaacttcacccggcttactcctgtaagtacgat
ggctgctgcatcatcgacaagatcacaaggaaccagtgccaactgtgtcgcttcaggaag
tgcatcgcagttggcatggctatggacctggtgctggacgactctaagcgggtagccaag
cgtcgtctgattgaggagaaccgggagaagaggaagaaggacgagatcgtgaagactcta
cagacacgtccggagcccgacagctcggagtgggagctgatccgccatgtgacagaggcc
caccaccacaccaacgcgcagggctcccactggaaacagaaacgcaagttcctgcctgag
gacataggtcagtcccctggggctcccaccccagacggagacaaggtagacctggaggcc
ttcagcgagttcaccaagatcatcacccccgccatcacacgcgtcgtcgactttgccaaa
aaactaaccatgttctcagagctgccttgtgaggaccagatcatcctattgaaaggttgc
tgtatggagatcatgtcgcttcgtgctgccgtgcgctacgacccagagagcgagacactt
accctgagcggcgagatggcggtgaagagggagcagctgaagaatggcgggctgggcgtg
gtgtcggacgccatctttgatttgggcaagagtctggcgcagtttaacctggacgactcg
gaggtggccctgctgcaggctgtgctcctcatgagctcagatcgctctggcctgacatcg
gtagataagatcgagaagtgccaggagacgtacctgcttgccttcgaacactacatcaac
caccgcaagcacaacattccccacttctggcccaagctgctgatgaaggtgacggacctg
aggatgatcggggcgtgccacgccagccgcttcctccacatgaaggtggagtgtcccaac
gaactcttccctccgctcttcctggaggtcttcgaggaccaggaagtatga
DBGET
integrated database retrieval system