Oncorhynchus kisutch (coho salmon): 109898335
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Entry
109898335 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM62 isoform X1
KO
K12030
tripartite motif-containing protein 62 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109898335
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109898335
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109898335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_2
zf-B_box
zf-C3HC4_3
zf-RING_2
zf-RING_6
CorA
zf-RING_10
zf-RING_5
Fib_alpha
U-box
ODAD1_CC
Phasin
AAA_13
DUF4795
DUF1664
TBCA
KIF21A
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
109898335
NCBI-ProteinID:
XP_031644380
Ensembl:
ENSOKIG00005000312
LinkDB
All DBs
Position
LG1:complement(17115090..17157081)
Genome browser
AA seq
499 aa
AA seq
DB search
MACCLKDELLCSICLSIYQDPVSFGCEHYFCRKCITEHWSRQEPHWARDCPECRRTFADP
LLSPSLKLSNIVERYSAFPLDAILNAQRSSYPCKDHEKVKLFCLSDKSLVCFFCDEPALH
EQHQVTTIDEAYEEIQREMKEQLATLQDSEKGHTEALRLLQRQLTETKSSAKGLRATIGE
VFEHLQRFLRERQKAMLEELETDTARTLSDIEHKIQRFSQQLRDVKEGIGILQERLNEPG
RHEFLEGVALTSERCSAYCLTDHGSAVLPNSHSPKLLIKGKIHETNLTYEDFPTSKYMGP
LQYTIWKSLFQDISPVPAALTLDPVTAHQRLILSDDCTIVAYGNLHPQPLQDSPRRFDVE
VSVLGAEGFGSGVHYWEVMVSEKTQWMIGVANETVSRKGSIQIQPSRGFYCIVMHDGNQY
SACTEPWTRLNVKSKLEKVGVYLDYPKGLLVFYNADDMSWLYTYREKTFPAKLCPYFSPG
QSHANGKNVQPLRINTVRL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcttgctgcctgaaggacgagcttttgtgttccatttgcctgagtatctatcaggac
cctgtcagttttggctgtgagcactatttctgccgtaagtgtataactgagcactggagc
aggcaggagccccactgggcccgagactgtcctgagtgtaggaggaccttcgcagaccct
cttctctccccaagcctcaagctgtccaacatcgtggagcgctactcagccttcccgctg
gacgccatcctcaacgcgcagaggagctcctatccgtgtaaggaccatgagaaggtcaag
ctcttctgcctcagcgacaagagcctggtatgcttcttctgtgatgagccagccttacac
gagcaacaccaggtcaccactattgacgaggcctacgaggagatacagagggagatgaag
gagcagctggccactctgcaggacagtgagaagggacacacagaggccctgcggctactg
cagagacaactcactgagaccaagtcatcggccaagggccttcgtgcgaccatcggcgag
gtgtttgagcatctgcagcgatttctgcgcgagcgccagaaggccatgttggaggagctg
gagactgatacagcgcgcacgctctccgacatcgagcacaagatccagcgtttcagccag
cagctgcgtgacgtcaaggagggcatcggcatcctgcaggagcgcctcaacgagccaggc
cgccatgaattcctggagggtgttgccctcacctccgagaggtgctctgcttactgtctg
actgaccatggatcagctgttcttccaaacagccacagtcctaaacttttgataaaagga
aagatacatgagaccaatttaacatatgaagatttcccgacctccaagtacatggggccc
ctgcagtacacaatatggaagtctctatttcaggatatttcaccagtgccagcagctttg
accttagaccccgtcacagcccaccagaggctcatcctatcagatgactgcaccattgta
gcctatggtaacctgcacccccagccgctgcaggactccccgcgacgcttcgacgtggag
gtgtctgtgctgggggccgagggcttcggctccggggtgcactactgggaggtgatggtg
tcagagaagacccagtggatgatcggcgtggccaacgagacggtcagccgcaagggcagc
atccagatccagcccagccgtggcttctactgcattgtcatgcacgacggcaaccagtac
agcgcctgcaccgagccctggacccgcctcaacgtcaagagcaagctggagaaggtgggc
gtgtacctggactaccccaagggcctgctggtgttctacaatgctgacgacatgtcctgg
ctgtacacctacagggagaaaactttcccggccaagctctgcccctacttcagccccggg
cagagccacgccaacggcaagaatgtccagccgctgagaatcaacaccgtgcgtctataa
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