KEGG   Oncorhynchus kisutch (coho salmon): 109898361
Entry
109898361         CDS       T09179                                 
Name
(RefSeq) syntaxin-1B
  KO
K08486  syntaxin 1B/2/3
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    109898361
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109898361
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109898361
Membrane trafficking [BR:oki04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    109898361
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   109898361
  Exosomal proteins of other body fluids (saliva and urine)
   109898361
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 AAA_13 GNVR Spectrin_Anc-1 VBS_C3G9 Lzipper-MIP1 Lge1 YtxH ARM_ECM29
Other DBs
NCBI-GeneID: 109898361
NCBI-ProteinID: XP_031683102
Ensembl: ENSOKIG00005006919
LinkDB
Position
LG6:67878707..67940243
AA seq 288 aa
MKDRTQELRSAKDSDDDEEVVQVDRDHFMDEFFEQVEEIRVCIDKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQIDKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DFVERAVSDTKKAVKYQSQARKKKLMIIVCCTILGVVLASTIGGYLGF
NT seq 867 nt   +upstreamnt  +downstreamnt
atgaaggatcgtacacaagaactacgaagtgctaaggacagcgatgatgatgaagaagtt
gtccaggttgaccgggatcacttcatggatgagttcttcgaacaggtggaagagatccga
gtctgtatagataagctgtcagaagatgtggagcaggtcaagaagcagcatagcgccatc
ctggcagcgcccaaccctgacgaaaagaccaagcaggagttggaggacctcacagctgac
atcaagaagacagccaataaagttcgctcaaaattaaaagcaatcgagcagagcattgag
caggaggaggggctgaacagatcatctgcagacctgcgaattcgtaagacacagcactcg
acgctgtcacgcaagtttgtagaggtgatgaccgagtacaacaccacgcagtccaaatac
agggaccgctgcaaggaccgtatccagagacagctggagatcactgggagaacaaccacc
aacgaggagctggaggatatgctggagagtggcaagcttgccattttcaccgatgatatc
aagatggactctcagatagacaagcaggccctgaatgagattgagacccgacacactgag
atcatcaagctggagaacagcatccgtgagctgcacgacatgtttgtggacatggccatg
ctggtcgagagccagggagagatgattgacagaattgagtacaacgtggaacactccgtg
gactttgtggagcgggcggtgtctgacaccaagaaggctgtcaaataccagagccaggct
cgcaagaagaagctcatgatcatcgtctgctgtactatcttgggagtcgtcttggcatcc
actatcggcggatacctgggcttttaa

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