Oncorhynchus kisutch (coho salmon): 109898482
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Entry
109898482 CDS
T09179
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04120
Ubiquitin mediated proteolysis
oki04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109898482
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109898482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109898482
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109898482
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109898482
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
109898482
NCBI-ProteinID:
XP_020349053
Ensembl:
ENSOKIG00005025257
UniProt:
A0A8C7HN67
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All DBs
Position
LG10:56995653..57005273
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AA seq
548 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKYDTDAPVEEGGKPKVLYGV
EFTFDADARVAITLYCQAFEEFTNGMAMYNPKGPALVSETVHYKRGVSQHFSLPSFKIDF
TDWKEEDLNFDLDRGVFPMVIQAVVDEGDDCFGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSEDENSDNSNECVVCLSDLRDTIILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGPLSPVSFSPVLAQTMDHDEHSSSDSVPP
GFEPISLLEALNGLHSVSPSIPPAPLYDDINFSGSLVGEGRPLGSPEHSGDGGLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTEATAAEDVPESISPDDEDR
LHSGGEREILQDYSSEHSSLTKTESDPPGDLSLPGSSESLKSQSTNCSSQPLLCPPSSLH
MEDEQFDP
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgattcttagccggagaatcgctggcgttgaggatattgatatccaggcgaat
tctgcgtacagatttccaccgaaatcggggaattactttgccagccattttttcatggga
ggggagaaatttgacactccacatccagagggttacctattcggagaaaacatggatctg
aacttccttggaaataggcctgtacaatttccgtacgtgaccccggcaccccatgagcct
gtgaagaccctgagaagtctggtcaatatcagaaaggactccctgcgcttggtcaggtac
aaatatgacactgatgctccagtagaggaaggagggaagccaaaggttctgtatggtgtg
gagttcacatttgacgctgatgctcgtgtggctatcaccctgtattgccaagcttttgag
gaattcaccaatgggatggcaatgtacaacccaaagggcccagccctggtttctgagact
gtacactataagaggggtgtgagccaacatttctccctaccttctttcaaaatcgatttc
accgactggaaggaggaggatctgaactttgacctggaccggggtgttttccccatggtg
attcaagctgtggtggatgaaggggatgattgctttggacatgcacatgtgctgctggca
gcctttgagagacatgtggatggtagtttctccgtcaagcctctgaagcagaagcaaatt
gtggatcgtgtgagctacctgctgcaggagatctatggaattgaaaacaaaaacaaccaa
gagaccaagccatcggaggatgagaacagtgacaacagcaatgagtgtgttgtttgtctg
tcagacctccgagacaccatcattctgccctgcagacacctgtgtctctgcaactcctgt
gctgacaccctgcgttaccaggccaacaactgtcctatctgcagactgcccttccgagcc
ttgctgcagatcagagctgtgaggaagaagcctgggccactgtcccctgtgtctttcagc
cctgtactggctcagaccatggaccatgatgagcactcgagctcagactcggttccccca
ggctttgagcctatctctctgctggaggccctgaacggcctgcactctgtgtccccctcc
atcccccccgcccccctatacgatgatattaacttctctgggagcctggtaggggagggc
cggccgctgggctccccagaacactccggggacgggggcctgcagaagggcaaggtcagc
aagtcacctgacagcaccctgaggtcgccctcatcacccatccaggaggaggatgaggag
aagctgtctgagatgtcggacgcccagcctcacacactgctctccagcagccctgctccc
accgaggccactgcagccgaggatgtaccggagtccatctccccagatgatgaggacagg
ctgcactctggaggagagcgagagatccttcaggactacagcagtgaacacagcagcctg
accaaaacagagagtgacccgccaggggacctgtctctgccagggtcatcagagagcctg
aagagtcagagtaccaactgctccagccagcccctcctgtgtccccccagcagccttcac
atggaggatgagcaatttgacccctaa
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