Oncorhynchus kisutch (coho salmon): 109898534
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Entry
109898534 CDS
T09179
Name
(RefSeq) next to BRCA1 gene 1 protein-like
KO
K17987
next to BRCA1 gene 1 protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04137
Mitophagy - animal
oki04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109898534
04137 Mitophagy - animal
109898534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109898534
03029 Mitochondrial biogenesis [BR:
oki03029
]
109898534
Membrane trafficking [BR:
oki04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
109898534
Pexophagy
Other pexophagy associated proteins
109898534
Aggrephagy
Cargo receptors
109898534
Xenophagy
109898534
Other autophagy associated proteins
Midbophagy
109898534
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
109898534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N_BRCA1_IG
PB1
UBA_NBR1_C
DUF5320
Motif
Other DBs
NCBI-GeneID:
109898534
NCBI-ProteinID:
XP_020349119
Ensembl:
ENSOKIG00005005123
LinkDB
All DBs
Position
LG10:58101492..58114573
Genome browser
AA seq
975 aa
AA seq
DB search
MDFYINLKVNFRGNAKNFLLSGSETKSWESMEAMVKRSFGLCNLQVTYFDEENEEVSINS
QMEYEEALKSASRQGNRLHMNVYETRGQPTRVPAKASGGEPKRGFRPPQHCPTLAQVVSR
KVQAAVPEQGMVIMKELKGTKEEDKTPPAWFTSYMEKFKDQVVREAVEKICREFSGQCCI
HKPIGAEAQIPEVTSSTLPGGPSSTPACSSCRGQTAGGGYQCSVCTSCTLCEPCSFSHDP
SHNLVRARTPLSIPEHGSPAPDHSRFYRRGDRSFRKAEKQRLKAEKRQLKAEVKEIRKQL
KMERRGLQWSAAGDGSSSPVLLQPRATQANSPERPKRPCPLVVPAMTALFLDENLPDGTR
LRPGTKFIKYWKMRNTGSVSWSSETKLKFMWGNLAVASGDRWREVAVPFLQPGQVGVVSV
ALCAPALEGSYTSHWRLAHGGEQFGPRVWCSIVVDPLAPAAVMADGVLVSPCVTPQGKNP
LSTDKGGKSGTAASRDQALMSVDQDEGEYYIPSVDLLTAQDLLSFELLDINIVQEIESVP
NNTPADMTPCISPLPHDGPLQEKPTLGLIQEEAEAHQAQGVKSIQPSQGLGPGAEGGRVP
AQEEGEEDMSGTQFVCETVMRSLTLEEAPEHTPLRGNCPGKVVRPAAQGGSASSSLKGKG
VEKRLEARLEKTQDILPVAPLTALAPPQMAIPELMMPDEGLESDIESICVDASGDEDKGE
LTEGNRGPRSRSSSASSEDYIIILPDCFDTSRPLGESMYSSALSQPGDAPDKPTDPDHQG
RTTPEGEHDEAEETVSGSSSANDMLCTSQTLDAVPLTPVVVAPPRLNSALTLSLDGNDQT
EAAAESLDRTEVYQPGESEDGSKQPDSQPDSPSASDDSEDNSEDPRHPGITGGLVKGALS
VAASAYKALFTGQPGPVQPPVDGATQDTMMGVLVEMGFGDRPLNQRLLKKHNYNLLDVVN
ELVQMTDNDWYSTRY
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggacttctacatcaatttgaaggtgaatttcagggggaatgcgaagaattttcttctg
tcaggttccgagacgaagagttgggagtcaatggaggccatggtgaaaaggtcctttggc
ctgtgtaatctacaagttacttattttgatgaggagaatgaggaggtatccataaacagc
caaatggagtatgaggaggcattaaagagtgcttccaggcaagggaaccggctgcacatg
aatgtgtatgagaccaggggtcagcccacgcgtgtgccggccaaggccagtggaggggag
cccaagagagggttccgtcccccacagcactgcccaaccctggctcaggtggtgagccgg
aaggtccaggctgctgtccccgaacagggcatggtgatcatgaaagaactaaaggggacc
aaagaggaagataagacacctccagcatggtttacatcttacatggagaagttcaaagac
caagtagtgagggaggcagtggagaagatctgtcgggagttctcaggccagtgctgcatc
cacaagcccattggggctgaggcccagatccctgaggtgacctcctccaccctgcctggg
ggtcctagttccacccctgcctgtagcagctgccggggccagaccgctggcggaggatac
cagtgcagtgtgtgtacgtcctgcacactgtgtgagccctgcagcttctcccatgacccc
agccacaacctggtgagagccagaacacccctctctatccctgagcacggctcaccagcc
ccagaccacagcaggttctaccggcgaggggaccggagcttccgtaaggcggagaagcag
cgtctgaaggctgagaagcgtcagctgaaggcggaggtaaaggagatcaggaagcagctg
aagatggaaaggaggggcctgcagtggagtgccgctggcgacgggagctcctcccccgtc
ctgctccaacccagggccacccaggccaacagcccagaacgtcccaagcgaccctgccct
ctggtggtgccagccatgacggccctgttcctggatgagaacctgcctgatgggactcgt
cttcgcccgggcaccaagttcatcaagtactggaagatgagaaacactggcagcgtgagc
tggagctctgaaaccaagctgaagttcatgtgggggaatctggcggtggcgtcgggtgac
cgctggcgtgaggtggctgtgcctttcctgcagccaggtcaggtgggcgtggtaagcgtg
gccctatgcgccccagccctggaaggctcatacacctcccactggcgtctggcacatggt
ggggagcagtttggccctcgcgtctggtgcagcattgtggtggaccccctggcccctgca
gccgtgatggcagatggcgtgctggtgtcgccctgcgtcacccctcaggggaagaacccc
ctctccacagataagggtgggaagtctggtactgcagcctctagggaccaagcactcatg
tcagtggaccaagacgaaggagagtactacattccctctgtggacctgctcacagcccag
gacttactctcctttgagctgttggacatcaacattgttcaggaaatagagagcgtgccc
aacaacaccccggcagatatgaccccgtgcatatccccactgccccatgacggtcccctg
caggagaagcccaccctggggttgatccaggaggaagcagaggcccatcaggcccaggga
gtcaaaagcatccagccgtctcagggcctggggccaggggcggaggggggccgggttcca
gcccaggaggagggagaggaggatatgagcgggactcagtttgtgtgtgagacggtgatg
cgctcgctcacactggaggaggccccagaacacacacccctgcgtgggaactgccccggc
aaagtggtccgcccagcagcccaaggtggctccgcctcctcttctcttaaagggaaaggt
gttgagaagcgtttggaggcgaggttggagaaaacccaggacatattacctgtggctcct
ctcacagccctagcaccaccccagatggctataccagagctgatgatgccagatgagggt
ctggagtcagacatcgagagcatctgcgtggacgccagcggggacgaagataaaggagag
ttgacagaggggaacaggggcccccgcagccgttcctcctcggcctcatccgaggattac
atcatcatcctccctgactgcttcgacaccagccgcccgctgggagagtccatgtacagc
tccgccctctcccagcctggcgacgcccccgacaagcccacagaccctgaccaccagggc
cgtaccactcccgagggggagcacgatgaagcagaagagacggtttcaggctccagcagc
gctaacgatatgctgtgcacctcccagactttggacgccgtgcccctaacccctgtggtg
gtggcaccccctcggctcaactcagctcttacactcagcctagacggcaatgatcagacc
gaggcagcagcggagtccctggacaggactgaggtctaccagccgggggagtcagaggat
ggttccaagcagccagacagccaaccagacagcccatctgcttctgatgactcagaagac
aactccgaagaccctagacacccaggcatcactggaggcctggtgaaaggagccctgtct
gtcgcagcatccgcctacaaggctctgttcactgggcagcctggcccagtgcagccccca
gtggatggagccacccaggacaccatgatgggggtgctggtggagatgggctttggtgac
cggccgctcaaccagcggctgctgaagaaacacaactacaacctgctggacgtggtcaac
gaactggtccagatgaccgacaatgactggtactccacccgctactga
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