KEGG   Oncorhynchus kisutch (coho salmon): 109898603
Entry
109898603         CDS       T09179                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03020  RNA polymerase
oki03420  Nucleotide excision repair
oki04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109898603
  09124 Replication and repair
   03420 Nucleotide excision repair
    109898603
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    109898603
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oki03021]
    109898603
   03400 DNA repair and recombination proteins [BR:oki03400]
    109898603
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     109898603
  RNA polymerase III system
   RNA polymerase III
     109898603
  RNA polymerase I system
   RNA polymerase I
     109898603
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109898603
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 109898603
NCBI-ProteinID: XP_020349220
Ensembl: ENSOKIG00005018385
UniProt: A0A8C7GM25
LinkDB
Position
LG10:59310304..59312715
AA seq 127 aa
MSDNEGDFDDGDFDDAEEDEGLDDLENVEDEDQENVKILPAGEGSQANQKRITTQYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKCRKIPIIIRRYLPDGSYEDWGC
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtccgacaacgaaggagattttgatgatggagactttgatgacgctgaagaggatgag
ggattggatgacctggaaaacgttgaagatgaggaccaagagaatgtgaagatcctgcct
gcaggggaggggtcacaggccaaccagaagaggatcacaacccaatacatgaccaaatat
gaaagggccagggtgctggggacacgcgccctccagatagccatgtgtgccccagtcatg
gtggagctggagggagagacagaccctctgcaaattgccatgaaagagctaaagtgcagg
aagatccccatcatcatccggcggtaccttcctgatggcagttatgaagattggggctgt
gacgagctcatcatcacagactga

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