Oncorhynchus kisutch (coho salmon): 109898720
Help
Entry
109898720 CDS
T09179
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109898720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109898720
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
NGL family
109898720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRR_14
ig
LRR_1
V-set
Ig_2
LRR_NXF1-5
LRR_EndoS
LRRNT
DUF7617
Motif
Other DBs
NCBI-GeneID:
109898720
NCBI-ProteinID:
XP_031683759
Ensembl:
ENSOKIG00005029798
LinkDB
All DBs
Position
LG6:complement(81586727..81623063)
Genome browser
AA seq
731 aa
AA seq
DB search
MRITTVTCLPCPSPLLLLLVQLLLRLLLSGPEFVEAASPCPTHCSCSNQASRVICTRQSL
DGVPESISVNTRYLNLQENSIEVIKSDTFKHLRHLEILQLSKNKISQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLVNLRYLNLGMCGLKDIPNLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVKVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTTMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADVGVSYFTTVTVETVEPNEGPTVYAGVMNSHNESYVITPSG
HQWRGGLPTTASSLSAWSLSSSRATRPTFTVPITAETGYSGLDDVMKTTKIIIGCFVAIT
FMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGAGAGGHGSGISGGGTVSRDGG
GGGGVGGGQSLRMHHPEMVNLPNLARQEHLNHYYKAHHFNNNMMGLGMGLNNNNNPSLSP
CSQSTPNSCAQGPTSTSGGTPTGGLLPSPVPLPQLGIHSSLKGLMGKGQNPQIEPLLFKS
GSKENVQETQI
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgacctgccttccctgcccctctcccctcctcctcctattggtc
cagctgctactgcggctcctcctctctgggccagaatttgtagaggccgcctccccctgc
cccacccattgcagctgctccaatcaggccagtcgagtcatctgtacaagacagagtctg
gatggggtgcctgagagcatatcagtcaacacacgatacctcaacctgcaggagaattca
atagaggttatcaagtcagacaccttcaagcacttgaggcaccttgagatcctgcagctg
tctaagaacaaaatcagtcagattgaggtgggagcattcaatggcctgcccaatctcaat
acactggagctgttcgacaaccgcctcaccctggtcccctcacaggccttcgagtacctc
agcaagctgcgggagctgtggttacggaacaaccccatcgagacgctgccgggctatgcc
ttccaccgcgtgccctcgctgcgccggctggacctgggagagctcaagaagctggactac
atctcagacgccgccttcgtgggcctggtcaacctgcgctacctgaaccttggcatgtgt
ggtctgaaggacatccccaacctgacggccctggtgcgtctggaggagctggagctgtct
gggaaccgtctggagatcatccggcctggctccttccagggcctggtgtcgctccgtaag
ctgtggctcatgcactcgcaagtgaaggtcatcgagcgcaacgccttcgacgacctgaag
aacctggaggagctcaacctttcccacaactccctgcactcgctgccccatgacctcttc
accccgctgcaccagctggagcgggtgcacctcaaccacaacccctgggtgtgcaactgt
gacgtgctgtggctcagctggtggctgaaggagacggtgcccagtaacactacgtgctgc
gctcgctgccacgctccccccggcctgaagggcaggtacatcggggagctggaccagagc
cacttcacctgctacgctcccgtcatcgtggagccgcccaccgacctcaacgttaccgag
ggcatggctgcagagctgaagtgtcgcacgggcaccaccatgacctcggtcaactggctc
acgcccaacggcaccctgatgacccacggctcctaccgggtccggatctccgtgctgcac
gacggtacgctcaactttaccaacgtcacgctgagggacacaggtcagtacacctgcatg
gtgaccaactcggctggcaacaccacggcaaccgccgtgcttaatgtcactgccgccgac
gttggcgtcagctacttcactactgtcaccgtggagacggtggagcccaacgagggcccg
acagtctacgcgggcgtcatgaacagccacaacgagtcatacgtcattaccccgtctggc
caccagtggaggggggggctccctaccaccgcctcctccctgtcagcctggtccttgtcc
tcatcccgggccacccggcccacctttactgtgcccatcactgccgagacgggctattct
ggccttgatgacgtgatgaagaccaccaagatcatcattggctgctttgtggccattacc
ttcatggcagccgtgatgctggtggtcttctacaagctgaggaagcagcaccagctgcac
aagcaccacggccccgcccgcgccatcgagatcatcaacgtggaggacgagattggcgcc
ggtgctggtggacacggcagcggcatctcagggggcggcaccgtctctcgggatggaggc
ggagggggaggagtaggaggagggcagagcctgaggatgcatcacccggagatggtcaac
ctgcccaacctggccagacaggagcacctcaaccactactacaaggcccatcacttcaac
aacaacatgatgggcctgggcatgggcctcaacaacaacaacaacccctccctctccccc
tgttcccagagcacccccaactcctgcgcacagggacccacctccaccagcggtggcacc
cccacaggtggcttgctgccctcccctgtgcccctgccccagctaggcatccacagctct
ctgaaggggctcatgggaaaaggccagaaccctcaaatcgagcctctgctcttcaagagt
ggctccaaggagaatgtgcaagagactcagatctga
DBGET
integrated database retrieval system
