KEGG   Oncorhynchus kisutch (coho salmon): 109898724
Entry
109898724         CDS       T09179                                 
Name
(RefSeq) coronin-1A-like
  KO
K13882  coronin-1A
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04145  Phagocytosis
Brite
KEGG Orthology (KO) [BR:oki00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    109898724
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109898724
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oki04812]
    109898724
   04147 Exosome [BR:oki04147]
    109898724
Membrane trafficking [BR:oki04131]
 Endocytosis
  Phagocytosis
   Coronins
    109898724
Cytoskeleton proteins [BR:oki04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     109898724
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109898724
SSDB
Motif
Pfam: DUF1899 Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_4 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_RIG_2nd EIF3I Beta-prop_EIPR1 DSE1_N PAC11 ANAPC4_WD40 Trimer_CC Beta-prop_WDR36-Utp21_1st Beta-prop_EML WDCP Beta-prop_WDR75_1st Beta-prop_WDR41 NBCH_WD40 WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N ASA1 TRM82_WD Beta-prop_HPS5 bZIP_1 BLOC1_2 KIF21A_2nd TSC22 DUF7310 MYCBP_helical IPGAL2_N Beta-prop_SPT8 DNAI3_WD DUF5798 ZapB Beta-prop_NUP159_NUP214 Seryl_tRNA_N DivIC
Other DBs
NCBI-GeneID: 109898724
NCBI-ProteinID: XP_031690641
Ensembl: ENSOKIG00005007964
LinkDB
Position
LG10:complement(65631873..65639969)
AA seq 456 aa
MSRKVVRASKFRHVFGQGVKADQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFL
VLPLNKTGRIDMSQPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPEGGLVTPL
NDPVVKLEGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVACGEAMVRIDSVHPDLIYS
ACWNRDGSQILTSCKDKTIRVLDPRKGTVIAEKEKTHEGSRPVKAVFVSEGKILSTGFSR
MSERQVALWDPKSFGEPLTLQELDTSSGVLLPFFDPDTGVVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQE
DLYPDTMGPEPSVEANEWFEGKEGQPILISLKDGFATTTKSKEFKVHKSLLKTTSAAMGH
QHGNTGEVHALQKEVKTLKETVEELTKRVSELESKN
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgtccaggaaggtagtcagggccagtaagttccgtcatgtcttcggccagggggtgaag
gctgaccagtgctatgatgacatccgcatctcccagatgacctgggacagcaacttctgc
tctgtcaaccccaagttcgtggccatgattgtggatgccagcggaggaggggccttccta
gtgctgcctctgaacaagacgggtcgtattgacatgtcccagcccacagtctgtggacac
acgggcccagtgctggatattgagttctgtccccacaacgacaacatcattgccagtggt
tcagaggactgcagtgtcatgatttgggaaatcccggagggtggcctggtcacgcccttg
aacgaccccgtggtgaagctggaggggcactccaaacgcgtgggcatcctcagttggcac
cccactgcccacaatgtgctcatgagtgcaggctgtgacaacgtggtgatcctgtggaac
gtggcgtgtggagaggccatggtgaggatcgactcggtccaccctgatctcatctacagt
gcctgctggaacagggacggctcccagatcctcacctcctgtaaggacaagaccatacgt
gtgctggacccccgcaagggcacagtcatcgccgagaaggagaagacacacgaaggctcc
aggcctgtcaaggctgtgtttgtgtccgaagggaagatcctgagcaccggcttcagtcgc
atgagtgagagacaggtggcactttgggacccgaagagctttggggagccactcaccctg
caggagttggacaccagcagtggtgtcctattgcccttctttgaccctgacactggcgtg
gtctacctctgtggcaagggtgacagcagtatccggtactttgaggtgacggatgaggct
ccctatgttcactacctgtccatgtacagcagtaaggagagtcagaagggcatgggctac
atgcccaagaggggcctggaggtcaacaagtgtgaaatcgccaggttttacaagctccat
gagaggaagtgcgagcccattgtcatgacggtgccccgcaagtctgacctgtttcaggag
gatttgtatccagacaccatgggtccagagccgtctgtggaggccaatgagtggtttgaa
ggcaaagagggccaacctatcctgatctccttgaaggacggttttgcgacaaccaccaaa
tccaaagagttcaaagttcacaaaagtcttctgaagaccacatcagcagccatggggcat
cagcacggtaacactggggaggtacatgccttgcagaaggaggtgaagactctgaaggaa
acagtagaggagctgaccaagcgcgtgagcgaactggagagcaagaattga

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