Oncorhynchus kisutch (coho salmon): 109898744
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Entry
109898744 CDS
T09179
Name
(RefSeq) transcription factor Sox-9-B-like isoform X1
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109898744
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109898744
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109898744
NCBI-ProteinID:
XP_020349432
Ensembl:
ENSOKIG00005050040
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MNLLDPFLKMTDEQEKCFSDAPSPSMSEDSVGSPCPSGSGSDTENTRPSDNHLLLGPDGV
LGEFKKADQDKFPVCIRDAVSQVLKGYDWTLVPMPVRLNGSSKNKPHVKRPMNAFMVWAQ
AARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPR
RRKSVKNGQSEPEDGEQTHISSGDIFKALQQADSPASSMGEVHSPSEHSAGQSQGPPTPP
TTPKTDLAVGKADLKREGRPLQEGTGRQLNIDFRDVDIGELSSDVISNIEAFDVHEFDQY
LPPHGHPGMPGINGAQTSYTGSYRGISSSSIGQVGAGGHGWMSKQQQQHPISILSGGGGT
GGEQGQSQGRTTQIKTEQLSPSHYSEQQGSPPQHVTYGSFNLQHYSASSYPSITRAQYDY
SDHQGGANSYYSHAGAQGSGLYSFSSYMSPSQRPMYTPIADPTGVPSVPTQTHSPQHWEQ
QPVYTQLSRP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaatctactcgaccccttcctgaagatgacagacgaacaggagaagtgtttctctgac
gctccaagccccagcatgtctgaggattcggtcggctcgccgtgcccgtctggctccggt
tccgacaccgagaataccaggccgtctgataatcatctcttactgggtccagacggcgtg
ctcggcgagttcaagaaggctgaccaagacaagttccctgtatgtatcagagatgcggtg
tctcaggtgctgaagggttacgactggaccttggtgcccatgcccgtccgactgaacggc
tccagcaaaaacaagccccatgtcaagagacccatgaacgcgttcatggtgtgggctcaa
gccgcccggaggaaactggcggaccagtacccacatcttcacaatgcagaactcagcaaa
accctgggaaaactctggagattactcaacgaaggcgagaagcgcccgttcgtagaggag
gctgaacgcttgagggtgcagcacaagaaagatcaccccgactacaagtaccagcccaga
aggagaaaatccgtgaagaacgggcagagcgagccagaggacggcgaacaaacccacatc
tcttccggtgacatatttaaagctctccagcaagccgactcgcccgcgtccagcatggga
gaagtgcattctcccagtgaacattcagcaggccagtcccagggcccacctacaccaccg
accacccccaaaacagacctggctgtgggcaaggccgacctgaagcgtgagggccgaccc
ctgcaagagggcacgggccgccagctcaacatcgacttccgagacgtggatatcggcgag
ctgagcagcgacgtcatctccaacatcgaggccttcgatgtccatgagttcgaccagtac
ttaccgccccacgggcaccccggcatgcccggcatcaacggcgcccagacgagctacacg
ggcagctaccgcggcatcagctctagctccattggccaggtgggtgctggaggccatggc
tggatgtccaagcagcagcagcagcaccccatctccatcctgagtggaggtggaggtact
gggggagagcaaggccagagccaggggagaaccactcagatcaagacggagcagttgagc
cccagtcactacagtgagcagcagggctcccctccccagcatgtcacctatggttcattc
aacctgcagcactacagcgcctcatcctacccctccattacccgcgcccagtatgactat
tctgatcaccagggcggcgccaactcttattatagccatgcaggtgcccaaggctcaggg
ctttattccttcagcagctatatgagccccagccagaggcccatgtatacccccatcgcc
gaccccaccggagtgccctcggtgcccacccagacccacagtccacagcactgggagcag
cagcctgtctacacacagctctccaggccctga
DBGET
integrated database retrieval system
