Oncorhynchus kisutch (coho salmon): 109898860
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Entry
109898860 CDS
T09179
Symbol
dhx32
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109898860 (dhx32)
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109898860 (dhx32)
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109898860 (dhx32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Motif
Other DBs
NCBI-GeneID:
109898860
NCBI-ProteinID:
XP_020349510
Ensembl:
ENSOKIG00005038697
LinkDB
All DBs
Position
LG11:complement(34780043..34787146)
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AA seq
733 aa
AA seq
DB search
MAQGITGEKYWEDRVAFETEGAGQEVVEYGDVLELNRFDGLPYSSRYYTLLKERMDLPVW
KAKCDFMDKLANRQFIIVSGTARTGRSSQIPQWCAEFCLAVQYQNGMVVCTQVHRQHTVD
LALRVADEMDVNIGHEVGYSIPLETCCSGDTVLRYCTDDMLLREMMSDPMLEHYGVIVID
QAHERTVSTDVLLGLLKDITLQRPELRVVLLTATHPGPKLLGHYKNVPLIQLEGVCSAEV
VYTGTSHKDYFCSALRLVLEIHHSQEEGDIVVFLATTQEIDLARDILLREEANIPTHLGE
LLPISVHPGLGGTLPMPGEEEGRCRRVFLTSSPNEDLFWAVHMLNFVIDAGVQKRNVYNP
RIRANSVAIQPISRIQAESRKQLVGPTGKSFCLYPEDTPLPSETRPHILESDITSTVLFL
KRMDIGGLGRCDFIDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEFPLEPQMAKT
LLASCEFDCVNEVVTIAAMLTAPSCFLVPSRELRLEASQCHLKFQHPEGDHFTLINIYKA
FKQNQQEPFVSVEKWCQDYFLSLSALQTADAIRSELTDILRRIELPVSMPSFGSKGNTLN
IKRALLAGFFMQVARDVDSSGNYFMLTHKHVAQIHPFSAYGTKTPKLGLPEWVLFHQYSF
SEDNCIRTVSHISPEEFIQMAPQYFFFNLPPSESKDILQNILDNGAEHYKAKKLQKSPSL
ESIPEVTASCVIQ
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagggcataaccggagagaagtattgggaggatagagtagccttcgaaacagaa
ggagcaggtcaagaagttgtagaatatggtgatgttttggagcttaatcgatttgacgga
ctaccctactcctctcgatattacacattactgaaggaaagaatggatctgccagtttgg
aaagccaagtgtgatttcatggacaagctggccaacagacagtttattattgtctctggc
acggcaagaactggcagaagctctcagatcccccagtggtgtgcagagttctgcctggct
gtccagtaccagaatggcatggtggtgtgcacccaggtccacaggcaacatacagtggat
ctggccctgcgtgtcgctgatgagatggacgtcaacatcggccatgaagtgggctacagc
atccccctagagacatgctgctctggtgacactgttctcaggtactgcactgatgacatg
ctgctcagagagatgatgtcagaccccatgctggagcactacggtgtcatcgtcatcgac
caagcccacgagaggacggtcagtacagatgttctactgggccttctcaaagacatcacc
ctgcagaggcccgagctccgcgtggtgctcctcacagctacacacccaggacccaaacta
ctgggccactacaagaatgtcccactgatccagctggagggggtatgttcagcggaggtg
gtgtatactggtaccagccacaaggactacttctgctctgccctgcgtctggttctggag
atacaccactcccaagaggaaggggatatagtcgtgtttttggccacaactcaagagata
gatcttgcccgtgatattctccttcgcgaggaggccaatatacccacacatctaggggaa
cttctccctatctcggtgcaccctgggctgggtggaactctgcccatgccgggtgaagag
gaaggccggtgcagaagagtattcctcacctccagtccaaatgaagacctcttttgggct
gtgcacatgctgaactttgtcattgatgccggtgtccagaaaagaaatgtttataaccct
aggatcagggcgaactcagtcgccattcaacctatcagtcggatccaagcagaaagccgc
aaacagcttgtaggaccaacagggaagagtttttgtctgtacccagaggacacacccctg
cccagtgagacacgcccccacatccttgagtctgacatcacatccacagtgctcttcctg
aagaggatggacatcggcggtctgggccgctgtgactttatcgacaggccagatcctgag
ggtctgatgcaggccttggaggaactggactatctagcagccctggatgacgatgggaac
ctgtcggagatcggcatcatcatgtctgagttccccctggagccccagatggccaagaca
ctactggcctcctgcgagtttgactgtgtcaacgaggtggtcaccatcgccgccatgctg
acagcaccaagctgctttctggtcccctcaagggagttgaggctagaggcctctcagtgt
cacctgaagttccagcacccagagggagaccacttcaccctcatcaacatctacaaggct
ttcaaacagaaccagcaggagccctttgtcagtgtggagaagtggtgtcaggattacttc
ctgagtctgtctgccctgcagacggctgatgctatccgctctgagctgactgacatcctg
aggaggatagagctgcctgtctccatgccttcctttggctccaagggaaacactctcaac
attaagagagcgctgctagctggcttcttcatgcaggtggcaagggatgtggattcatca
gggaattacttcatgttgacacacaagcacgtggcccagatccaccctttctctgcctac
ggcaccaagacacccaaactgggcctgccggagtgggtcctcttccatcagtactccttc
tcagaggacaactgcatccgcaccgtgtcccacatatccccagaggagttcattcagatg
gctccacagtacttcttcttcaacctgcctcccagcgagagcaaggacatcctccagaac
atcttagacaatggagctgaacactacaaagcaaagaagcttcaaaagagccccagccta
gagagcataccagaagtcaccgccagttgtgtcatacagtga
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