KEGG   Oncorhynchus kisutch (coho salmon): 109899193
Entry
109899193         CDS       T09179                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109899193
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oki03041]
    109899193
Spliceosome [BR:oki03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109899193
 Complex B
    109899193
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7
Other DBs
NCBI-GeneID: 109899193
NCBI-ProteinID: XP_031692253
Ensembl: ENSOKIG00005002680
LinkDB
Position
LG11:81166164..81200348
AA seq 1017 aa
MADRTPGGSQKSSAKALLESKLKSFSIGKTVVPKRTLSKKEQEEIKKKEDERAAAEIYEE
FLAAFEGGEGKVKAFVRGGIANATKEEAASDDKKGKLYKPKSRFETTAAAAPAKSSFLPL
DIPPQFLTLDKKHTLKKTTEKGKKKSNLELFKEELKQIQEERDERHKIKGRVSRFEPLSG
MEGKRSSMDVSSRRNRPSSVLDDSAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRY
GPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMMMNFEMKLGWGKGVP
IPPHPIYIPPSMVENTLPPPPSGLPFNAQTRERLKNPNAVLLPPPKNKEEFDKTLSQAIV
KVVIPTERNLLSLIHRMIEFVVREGPMFEAMIMNRELSNPMYRFLFENQSPAHVYYRWKL
YSILQGEAPTKWRTDEFRMFKNGSLWRPPPLNPYLHGNFEEGEEPEEEEEEPGKKGCLKE
EERDQLEELLRGLTPRKGDIAEAMLFCLSHAEAAEEIVECVTESLSILKTPLPKKIARLY
LVSDVLYNSSAKVANASYYRKYFEAKLCQVFSDLNATYKSTQGHLQSENFKQRVMSCFRA
WEDWAVYPDPFLIKLQNVFLGLVNLSAEEAASTPITVEKLQFEHLAPSLLAQNEPVEDID
GAPIGEDMDGAPLEDVDGVPIGLDGAAVVAGAPLDGASLGLDDLDGVPIKAPEEDIDGLP
LDRAAAKSFKVAPSKWEAVDESELEAQAVTTSKWEIFEQPEEENKDEDDSDDEDTKSSRS
EEPPSYSNPIRDDLDSKTKHSEMNEDRRTKLREIEVKVMKFQDELESGKRPKKSGQSLQE
QVEHYRDKLLHKEKEKEKLEREKEREKEREKKDKEKSEARLKDAKKEESTPTRRDRRGVS
PVVAKKRRHSGSPGSPPRSSSRRARSPSPRSERSERSERSDRSYSKDVASSRSRSSHKDS
PRVTSSKKLSKRSPSLPRTPKRSRRSRSRTPKKSAKKSRSKSRSPHRSHKKSKKSKH
NT seq 3054 nt   +upstreamnt  +downstreamnt
atggcggaccgaacgccaggtggttcgcagaaatctagcgcaaaggcgctactagagagc
aagttgaagtccttcagcattggcaaaacggtcgtgcccaagaggaccctaagcaagaag
gaacaagaggaaattaaaaaaaaggaggatgagcgggcagctgcagagatctatgaagag
ttcctggctgcgttcgagggaggagagggcaaggtcaaggcctttgtccggggaggcatt
gctaatgcaactaaagaggaggctgcttccgatgacaagaagggcaagctgtataaaccc
aagtctcgcttcgaaacaacagcagcagcagcaccagcgaaaagcagcttcctgcctttg
gatatccctccacagtttttaacattagataaaaaacatacactgaagaaaacaactgaa
aagggaaagaagaaaagcaacctagagctctttaaagaagaactgaaacaaatacaggag
gagagagatgaaagacacaagataaaaggcagagtcagtcgattcgaacctctctctggg
atggagggaaaacgctcctcaatggatgtttcttcaagaagaaaccgtccatccagtgtt
ctggacgactctgcacctggttcccatgacgttggagacccctctacgactaacttatat
ctcggaaacatcaacccacagatgaacgaggagatgctgtgtcaggagtttgggcgttat
ggccctctagccagcgtgaagatcatgtggccgcggacggacgaggagagggccagggag
aggaactgtggctttgttgcctttatgaatcggagggatgcggagagagctctgaagaac
ctcaacgggaagatgatgatgaactttgagatgaagctgggctggggtaaaggtgtaccc
atcccacctcacccaatctacatccccccgtccatggtggagaacaccctccctccgccc
ccctccggcctacccttcaacgcacagacccgcgagaggctgaagaaccccaacgccgtc
ctgctccctccgcccaagaacaaggaggaattcgacaagactctgtcccaagccatagtc
aaagtggttatcccaacagaaaggaatttgctctctctcatccaccgaatgatcgagttt
gtggtgcgtgagggccccatgttcgaagccatgatcatgaatcgagagctcagcaatccc
atgtaccggtttctgtttgagaaccagagcccagcacacgtctactaccgttggaaactc
tattccatactacagggagaagcaccaacaaaatggcggacggacgaattccgcatgttc
aagaacggctcgttgtggcgccctcctcccctcaacccctacctacacggcaactttgaa
gagggggaggagccagaggaggaagaggaggaacctgggaagaaaggatgcttaaaagag
gaagagcgtgatcagctagaagagctgttgagaggtctgactcctaggaagggtgacata
gcagaggccatgttgttctgtctgagtcatgccgaggctgcagaggagatcgtagagtgt
gtcacagagtctctctccatcctcaagacaccactccccaagaagattgcacgtttatat
cttgtgtctgatgtgctgtacaactcgtctgctaaagtagccaacgcgtcgtactacaga
aaatactttgaggccaagctctgccaggtcttctcggacctcaatgcaacatacaagtcg
acacagggtcatctccagtcagagaactttaagcaacgagtgatgtcgtgtttccgtgcg
tgggaggactgggccgtgtacccagatcccttcctcatcaagctacagaacgtcttcctg
ggtctagtcaacttgtcagctgaggaggcggcttccactcccatcacagtagagaaactg
cagtttgaacatctggcccctagtctgttggcccagaatgagccagtggaggacattgac
ggggcccccattggggaggacatggatggggccccactggaggacgtagatggggttcct
ataggactggacggggctgccgtggtggccggcgcccctctagacggagcttccctgggg
ctggatgatctggatggagtgcccatcaaagccccggaggaggacatagacggactgccc
ttggatcgtgctgcggccaaatcctttaaagtagcgccttcaaaatgggaagcagtggac
gaatctgagctggaggcacaggccgtgaccacctcaaagtgggagatctttgagcagcca
gaggaggagaataaggacgaggacgacagtgatgatgaggacaccaagagttctcgttca
gaggagcctcccagttactctaaccccatcagagacgacttggactccaaaaccaagcac
tctgagatgaatgaggacagacgcaccaagctacgggagatagaggtcaaagtgatgaag
ttccaggacgagctggagtctgggaaaaggcccaagaagtctggccagagtctccaagaa
caggtggaacactacagagacaaactgttacacaaggaaaaagaaaaggagaaactggaa
cgagagaaagagcgggagaaagagagggagaaaaaggataaggagaaaagcgaagctcgg
ttaaaagacgccaagaaggaggagtctactccgaccaggagagacaggcgcggtgtgtct
cctgtggttgctaagaaacggcgtcacagcggctcgcccggcagccccccgaggagcagc
agcagacgggctcgctccccgtccccccgctcggagaggtcagaacgttccgaacgctcg
gaccgctcctactccaaggacgtagcgtcgtcacgatcccgctcctcccacaaagactcc
cctcgcgtcaccagcagcaagaagttgtccaaaaggtctccctctttaccccgcacgccc
aaacgttccaggagatcgcgctccagaacacccaagaaatccgctaagaagtcacggtca
aaatcacggtctccgcatcggtcccacaagaaatcaaagaagagcaaacactaa

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