Oncorhynchus kisutch (coho salmon): 109899203
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Entry
109899203 CDS
T09179
Name
(RefSeq) nucleoporin p58/p45-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109899203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109899203
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109899203
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
NUP58_M
YcaO_C
Nup49_C
His-Xaa-Ser_sys
PSY3
MSC_0620_UU052
XAC0095_dom
FapA
Motif
Other DBs
NCBI-GeneID:
109899203
NCBI-ProteinID:
XP_031692215
Ensembl:
ENSOKIG00005016786
LinkDB
All DBs
Position
LG11:77969279..77988750
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AA seq
562 aa
AA seq
DB search
MSGFNFGSGSTNTGGGFSFGGTASTPAAAVMGSFTLGATASTTTTSSLGLGGSLFAQKPT
GGFSFNTPASGAPAASTTGFSMAFNKPSASAQPFSLTAASSAPSGAGLTLGSVLTSTAPQ
QGATGFALNLGGVAPSTGLSLGSSMFSNMAPTGLAQTTLGSGGLTLGSLVSTSTAISTAP
SLGLGGVDFSTSSEKKSDKSLGASPQDSKALKDENLPPVICQDVDHFQKFVKEQKQVHEE
ISRMSSKAMLKVQDDIRSLKQLLSVSASGLQRNALAIGHLKMEAALELKNADIALRTQKT
PPGLQHENSAPYDYFRCLVDQFEVQLQQYRQQIEELENHLSTQDSGSHITPQDLSLAMQK
LYQTFVCLAAQLQSVHENVKILKQQYLGYCRAFLEDSTDVFESKRAASKKWKSAPRITIG
PAPFGSVPNAAAVAMAATLSQQQPGPGRQAPLGSGLGNPFASGVGSSTGSSGLGVFVGGP
GFGGVATGGSFGFSSASKASGGSLSAGFGSSSSSGFNFSNPGLNASAGLTFGVSNPTATG
FGTGGPLLQLKKPPVGNKRGKR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctttaatttcgggtctggatccacgaacaccggcggagggttttcgtttgga
ggcactgccagtaccccagctgcagcagttatgggtagctttactctgggggctacagcc
tccaccaccaccacctcttctctgggcctgggggggtccctgttcgcacagaaacctact
ggggggttctcctttaacactcctgcctcaggtgccccagcagcctctaccacgggcttt
agtatggccttcaataaaccgtctgcctcggcccaacccttctccctcactgctgcctcc
tcggccccctcaggggcaggactgacgctaggctccgtcctcacctccaccgctccacaa
caaggagccacaggatttgctctcaacctagggggtgtggccccatccacaggtctatcg
ttgggttccagtatgttctctaacatggctcctactggtttggcccagaccactcttggt
tcaggggggttgacgttaggttctctagtctctacttcgacggcgatctcaacagccccc
agccttggactgggcggagttgacttcagcacttcctcagagaaaaagagcgacaaatca
ttaggggccagcccacaggacagtaaagcgttgaaagatgaaaacttgcctccagtcatc
tgtcaggatgtagaccatttccagaagtttgtgaaggaacagaagcaggttcacgaggag
atcagcaggatgtcatctaaagccatgctgaaggttcaggacgacatcaggagtctcaaa
cagctgctgtctgtcagtgcctcgggactacagagaaacgccctggctataggtcacctg
aagatggaggctgcgctggagttgaagaatgcagacatagctctacggactcagaagaca
ccccctggactccaacatgaaaactcagctccctatgattatttccggtgtttagtggat
cagtttgaggtccagctgcagcagtacagacagcagatagaggagctggagaatcacctc
tctacacaggacagtggatcacacatcacaccacaggatctgtctctggccatgcagaag
ttgtaccagacgtttgtttgtctggctgctcagctccagtcagtacacgagaacgtcaag
atcctgaagcagcagtacctgggatactgccgggccttcctggaggactccactgatgtt
ttcgagtccaagcgggcggccagtaagaagtggaagagcgccccacgcatcacaatcggt
cccgccccgttcggcagtgtccctaacgcagcagcggtcgccatggcagccacgctgagc
cagcagcagcccggcccagggagacaggcacccctggggtctggcttgggaaaccccttt
gcctcaggagtgggctctagcacaggctcatcaggccttggagtatttgttgggggtcca
ggtttcgggggggttgcaacggggggctcatttggtttctcctccgccagcaaggcctcg
ggagggagcctgagcgcaggttttggtagcagcagtagttcagggtttaacttcagtaac
cccgggctcaacgcatctgccggcctgacatttggagtgtccaaccctaccgccacgggc
ttcggcacgggaggtcccctgctacagctcaagaagcccccggtgggaaacaagaggggc
aagagatag
DBGET
integrated database retrieval system
